Reference Gene Name: PHYA (AT1G09570) EnsemblPlants
Reference Species : Arabidopsis thaliana
Root Species : Tracheophyta 		Tracheophyta Link Wikipedia to Arabidopsis thaliana Link Ensembl
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Tracheophyta speciation node (click to collapse) Tracheophyta Click to show this node (Magnoliophyta) Magnoliophyta duplication node (click to collapse) Click to show this node (Magnoliophyta) Magnoliophyta duplication node (click to collapse) Click to show this node (Magnoliophyta) Magnoliophyta duplication node (click to collapse) Click to hide this line (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Magnoliophyta Click to hide this line (core eudicotyledons) core eudicotyledons speciation node (click to collapse) core eudicotyledons Click to hide this line (rosids) rosids speciation node (click to collapse) rosids Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:1 Click to hide this line (Arabidopsis lyrata subsp. lyrata) Arabidopsis lyrata subsp. lyrata terminal node Arabidopsis lyrata subsp. lyrata - Chr:1 XM_002892459.1 (fgenesh2_kg.1__988__AT1G09420.1) XM_002892472.1 (fgenesh2_kg.1__1025__AT1G09700.1) Click to show this node (Brassica rapa subsp. pekinensis) Brassica rapa subsp. pekinensis duplication node (click to collapse) Click to hide this line (Brassica rapa subsp. pekinensis) Brassica rapa subsp. pekinensis terminal node Brassica rapa subsp. pekinensis - Chr:A06 Bra020028 (Bra020028) Bra020027 (Bra020027) Bra020026 (Bra020026) Bra020025 (Bra020025) Bra020012 (Bra020012) Bra019999 (Bra019999) Bra019998 (Bra019998) Click to hide this line (Brassica rapa subsp. pekinensis) Brassica rapa subsp. pekinensis terminal node Brassica rapa subsp. pekinensis - Chr:A09 Bra031687 (Bra031687) Bra031686 (Bra031686) Bra031685 (Bra031685) Bra031684 (Bra031684) Bra031683 (Bra031683) Bra031681 (Bra031681) Bra031680 (Bra031680) Bra031679 (Bra031679) Bra031677 (Bra031677) Bra031670 (Bra031670) Bra031664 (Bra031664) Bra031663 (Bra031663) Bra031662 (Bra031662) Bra031661 (Bra031661) Bra031660 (Bra031660) Bra031659 (Bra031659) Bra031658 (Bra031658) Bra031657 (Bra031657) Click to hide this line (fabids) fabids speciation node (click to collapse) fabids Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm20 GLYMA20G21970 GLYMA20G21983 GLYMA20G21996 GLYMA20G22010 GLYMA20G22020 GLYMA20G22030 GLYMA20G22040 GLYMA20G22050 GLYMA20G22070 GLYMA20G22090 GLYMA20G22110 GLYMA20G22120 GLYMA20G22130 GLYMA20G22140 GLYMA20G22150 GLYMA20G22170 GLYMA20G22190 GLYMA20G22200 GLYMA20G22240 GLYMA20G22255 GLYMA20G22270 GLYMA20G22311 GLYMA20G22331 GLYMA20G22351 GLYMA20G22370 GLYMA20G22380 Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm10 GMA.12486 (GLYMA10G28030) GLYMA10G28035 GLYMA10G28040 GLYMA10G28051 GLYMA10G28060 GLYMA10G28070 GLYMA10G28075 GLYMA10G28080 GLYMA10G28091 GLYMA10G28100 GLYMA10G28110 GLYMA10G28130 GLYMA10G28140 GLYMA10G28150 GLYMA10G28180 FEN1 (GLYMA10G28200) GLYMA10G28211 GLYMA10G28220 GLYMA10G28240 GLYMA10G28265 GLYMA10G28260 GLYMA10G28270 GLYMA10G28300 GLYMA10G28310 GLYMA10G28320 Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm19 GLYMA19G41060 GLYMA19G41080 GLYMA19G41090 GLYMA19G41100 GLYMA19G41111 GLYMA19G41120 GLYMA19G41130 GLYMA19G41141 GLYMA19G41150 GLYMA19G41160 GLYMA19G41171 GLYMA19G41181 GLYMA19G41190 GLYMA19G41200 GLYMA19G41230 GLYMA19G41270 GLYMA19G41275 GLYMA19G41280 GLYMA19G41287 GLYMA19G41294 GLYMA19G41302 GLYMA19G41310 SOYAP2 (GLYMA19G41320) GLYMA19G41330 GLYMA19G41350 Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm03 GLYMA03G38460 GLYMA03G38480 GMA.32200 (GLYMA03G38490) GLYMA03G38500 GLYMA03G38510 GLYMA03G38520 GLYMA03G38530 GLYMA03G38540 GLYMA03G38550 GLYMA03G38560 GLYMA03G38570 GLYMA03G38581 GLYMA03G38591 GLYMA03G38600 GLYMA03G38610 GLYMA03G38640 GLYMA03G38690 GLYMA03G38701 GLYMA03G38711 GLYMA03G38720 GLYMA03G38730 GLYMA03G38740 GLYMA03G38750 GLYMA03G38760 Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:13 POPTRDRAFT_662504 (POPTR_0013s00200) POPTRDRAFT_570638 (POPTR_0013s00210) POPTRDRAFT_240151 (POPTR_0013s00230) POPTRDRAFT_823553 (POPTR_0013s00250) POPTR_0013s00260 POPTR_0013s00270 POPTRDRAFT_570648 (POPTR_0013s00300) XM_002319416.1 (POPTR_0013s00320) POPTR_0013s00330 POPTRDRAFT_570651 (POPTR_0013s00340) POPTRDRAFT_240188 (POPTR_0013s00350) POPTRDRAFT_570653 (POPTR_0013s00360) POPTRDRAFT_570654 (POPTR_0013s00370) Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:14 Vv14s0060g00010 Vv14s0060g00040 Vv14s0060g00050 Vv14s0060g00060 Vv14s0060g00070 Vv14s0060g00080 Vv14s0060g00090 Vv14s0060g00110 Vv14s0060g00150 Vv14s0060g00160 Vv14s0060g00170 Vv14s0060g00200 Vv14s0060g00210 Vv14s0060g00220 Vv14s0060g00250 Vv14s0060g00270 Vv14s0060g00280 Vv14s0060g00290 Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:10 Solyc10g044490.1 Solyc10g044500.1 Solyc10g044510.1 SEND33 (Solyc10g044520.1) Solyc10g044530.1 Solyc10g044540.1 Solyc10g044550.1 Solyc10g044560.1 Solyc10g044580.1 Solyc10g044600.1 Solyc10g044610.1 Solyc10g044620.1 Solyc10g044630.1 Solyc10g044640.1 Solyc10g044660.1 Solyc10g044690.1 Solyc10g044700.1 Solyc10g044710.1 Solyc10g044720.1 Solyc10g044730.1 Solyc10g044740.1 Solyc10g044750.1 Solyc10g044770.1 Solyc10g044780.1 Solyc10g044790.1 Solyc10g044800.1 Solyc10g044810.1 Solyc10g044820.1 Solyc10g044830.1 Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch10 PGSC0003DMG400009752 (PGSC0003DMG400009752) PGSC0003DMG400009754 (PGSC0003DMG400009754) PGSC0003DMG400009753 (PGSC0003DMG400009753) PGSC0003DMG400044702 (PGSC0003DMG400044702) PGSC0003DMG400018974 (PGSC0003DMG400018974) PGSC0003DMG400018975 (PGSC0003DMG400018975) PGSC0003DMG400018978 (PGSC0003DMG400018978) PGSC0003DMG400044506 (PGSC0003DMG400044506) PGSC0003DMG400046613 (PGSC0003DMG400046613) PGSC0003DMG400018977 (PGSC0003DMG400018977) PGSC0003DMG400047089 (PGSC0003DMG400047089) PGSC0003DMG400042286 (PGSC0003DMG400042286) PGSC0003DMG400046994 (PGSC0003DMG400046994) PGSC0003DMG400044675 (PGSC0003DMG400044675) PGSC0003DMG400036134 (PGSC0003DMG400036134) PGSC0003DMG400039246 (PGSC0003DMG400039246) PGSC0003DMG400040719 (PGSC0003DMG400040719) PGSC0003DMG400004327 (PGSC0003DMG400004327) PGSC0003DMG400004326 (PGSC0003DMG400004326) PGSC0003DMG400036106 (PGSC0003DMG400036106) PGSC0003DMG400037003 (PGSC0003DMG400037003) PGSC0003DMG400040476 (PGSC0003DMG400040476) PGSC0003DMG400040181 (PGSC0003DMG400040181) PGSC0003DMG400004325 (PGSC0003DMG400004325) PGSC0003DMG400004329 (PGSC0003DMG400004329) PGSC0003DMG400004324 (PGSC0003DMG400004324) PGSC0003DMG400004328 (PGSC0003DMG400004328) PGSC0003DMG400046320 (PGSC0003DMG400046320) PGSC0003DMG400011765 (PGSC0003DMG400011765) Click to hide this line (commelinids) commelinids speciation node (click to collapse) commelinids Click to show this node (Poaceae) Poaceae duplication node (click to collapse) Click to hide this line (Poaceae) Poaceae speciation node (click to collapse) Poaceae Click to show this node (BEP clade) BEP clade speciation node (click to collapse) Click to show this node (Pooideae) Pooideae duplication node (click to collapse) Click to hide this line (Pooideae) Pooideae speciation node (click to collapse) Pooideae Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:1 BRADI1G10370 BRADI1G10380 BRADI1G10390 BRADI1G10400 BRADI1G10410 BRADI1G10420 BRADI1G10430 BRADI1G10440 BRADI1G10447 BRADI1G10460 BRADI1G10470 BRADI1G10480 BRADI1G10490 BRADI1G10500 BRADI1G10530 BRADI1G10540 BRADI1G10550 BRADI1G10560 BRADI1G10567 BRADI1G10580 BRADI1G10590 BRADI1G10600 BRADI1G10610 BRADI1G10620 BRADI1G10630 BRADI1G10640 BRADI1G10650 BRADI1G10660 BRADI1G10670 Click to hide this line (Hordeum vulgare subsp. vulgare) Hordeum vulgare subsp. vulgare terminal node Hordeum vulgare subsp. vulgare - Chr:morex_scaffold_9764 Click to show this node (Pooideae) Pooideae speciation node (click to collapse) Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:1 BRADI1G10360 BRADI1G10370 BRADI1G10380 BRADI1G10390 BRADI1G10400 BRADI1G10410 BRADI1G10420 BRADI1G10430 BRADI1G10440 BRADI1G10447 BRADI1G10460 BRADI1G10470 BRADI1G10480 BRADI1G10490 BRADI1G10500 BRADI1G10530 BRADI1G10540 BRADI1G10550 BRADI1G10560 BRADI1G10567 BRADI1G10580 BRADI1G10590 BRADI1G10600 BRADI1G10610 BRADI1G10620 BRADI1G10630 BRADI1G10640 BRADI1G10650 BRADI1G10660 Click to show this node (Panicoideae) Panicoideae speciation node (click to collapse) Click to show this node (Andropogoneae) Andropogoneae speciation node (click to collapse) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:1 GRMZM2G552644 GRMZM2G417496 AC211222.2_FG001 GRMZM5G876602 GRMZM2G060943 GRMZM2G090657 AC211940.4_FG001 GRMZM2G002109 GRMZM2G002138 GRMZM2G002143 AC186525.4_FG005 bsd2 (GRMZM2G062788) AC199540.3_FG003 GRMZM2G062777 GRMZM2G088490 GRMZM2G179844 GRMZM5G832908 GRMZM2G480451 GRMZM2G129486 GRMZM2G560077 AC214634.3_FG003 GRMZM2G429807 GRMZM2G429759 GRMZM5G843186 GRMZM2G407382 AC186518.3_FG003 GRMZM2G179138 GRMZM2G179121 GRMZM2G179118 Click to hide this line (Poaceae) Poaceae speciation node (click to collapse) Poaceae Click to show this node (BEP clade) BEP clade speciation node (click to collapse) Click to hide this line (Oryza) Oryza speciation node (click to collapse) Oryza Click to hide this line (Oryza sativa) Oryza sativa speciation node (click to collapse) Oryza sativa Click to hide this line (Oryza sativa Indica Group) Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:3 OASB2 (BGIOSGA009914) BGIOSGA013463 OS03G0718200 (BGIOSGA009913) OS03G0718500 (BGIOSGA013464) OsJ_12365 (BGIOSGA009912) OS03G0718600 (BGIOSGA009911) B1377B10.1 (BGIOSGA013465) OS03G0719000 (BGIOSGA009910) OsI_13308 (BGIOSGA013466) B1377B10.4 (BGIOSGA013467) B1377B10.5 (BGIOSGA009909) OS03G0719400 (BGIOSGA009908) OsI_13312 (BGIOSGA013468) OsI_13313 (BGIOSGA013469) OS03G0719500 (BGIOSGA009907) B1377B10.9 (BGIOSGA009905) OSPTR1 (BGIOSGA009904) OsI_13318 (BGIOSGA009903) B1377B10.13 (BGIOSGA013470) OsI_13320 (BGIOSGA013471) OSJNBA0031O09.05 (BGIOSGA013472) OsI_13322 (BGIOSGA009902) OS03G0721200 (BGIOSGA013473) OSJNBA0031O09.02 (BGIOSGA009901) B1377B10.21 (BGIOSGA009900) B1377B10.22 (BGIOSGA013474) B1377B10.23 (BGIOSGA009899) OsI_13328 (BGIOSGA013475) NM_001057641.1 (BGIOSGA013476) OsI_13330 (BGIOSGA009898) Click to hide this line (Oryza sativa Japonica Group) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:3 LOC_Os03g50850 LOC_Os03g50860 LOC_Os03g50870 LOC_Os03g50880 LOC_Os03g50885 LOC_Os03g50900 LOC_Os03g50920 LOC_Os03g50940 LOC_Os03g50960 LOC_Os03g50970 LOC_Os03g50980 LOC_Os03g50990 LOC_Os03g51000 LOC_Os03g51010 LOC_Os03g51020 LOC_Os03g51040 LOC_Os03g51050 LOC_Os03g51060 LOC_Os03g51080 LOC_Os03g51090 LOC_Os03g51100 LOC_Os03g51110 LOC_Os03g51120 LOC_Os03g51140 LOC_Os03g51150 LOC_Os03g51160 LOC_Os03g51170 LOC_Os03g51180 LOC_Os03g51190 LOC_Os03g51200 Click to hide this line (Oryza glaberrima) Oryza glaberrima terminal node Oryza glaberrima - Chr:Oglab03_unplaced058 ORGLA03G0408600 ORGLA03G0408700 ORGLA03G0408800 ORGLA03G0408900 ORGLA03G0409000 ORGLA03G0409100 ORGLA03G0409200 ORGLA03G0409300 ORGLA03G0409400 ORGLA03G0409500 ORGLA03G0409600 ORGLA03G0409700 ORGLA03G0409800 ORGLA03G0409900 ORGLA03G0410000 ORGLA03G0410200 ORGLA03G0410300 ORGLA03G0410400 ORGLA03G0410500 ORGLA03G0410600 ORGLA03G0410700 ORGLA03G0410800 ORGLA03G0410900 ORGLA03G0411000 ORGLA03G0411100 ORGLA03G0411200 ORGLA03G0411300 ORGLA03G0411400 ORGLA03G0411500 ORGLA03G0411600 Click to hide this line (Oryza brachyantha) Oryza brachyantha terminal node Oryza brachyantha - Chr:3 OB03G39070 OB03G39080 OB03G39090 OB03G39100 OB03G39110 OB03G39120 OB03G39130 OB03G39140 OB03G39150 OB03G39160 OB03G39170 OB03G39180 OB03G39190 OB03G39200 OB03G39210 OB03G39230 OB03G39240 OB03G39250 OB03G39260 OB03G39270 OB03G39280 OB03G39290 OB03G39300 OB03G39310 OB03G39320 OB03G39330 OB03G39340 OB03G39350 OB03G39360 OB03G39370 Click to show this node (Panicoideae) Panicoideae duplication node (click to collapse) Click to hide this line (Panicoideae) Panicoideae speciation node (click to collapse) Panicoideae Click to hide this line (Andropogoneae) Andropogoneae speciation node (click to collapse) Andropogoneae Click to show this node (Zea mays) Zea mays duplication node (click to collapse) Click to show this node (Zea mays) Zea mays duplication node (click to collapse) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:5 GRMZM5G896650 GRMZM2G096591 GRMZM5G897022 GRMZM5G878347 GRMZM2G046055 GRMZM2G046050 GRMZM2G045955 AC216052.3_FG008 GRMZM2G045941 GRMZM2G045690 AC216052.3_FG004 GRMZM2G093139 GRMZM2G181000 GRMZM2G181002 GRMZM5G813740 GRMZM2G481305 GRMZM5G829476 GRMZM2G455869 GRMZM2G455874 GRMZM2G425236 GRMZM2G152328 GRMZM2G152548 GRMZM5G833140 GRMZM2G459543 AC209072.3_FG001 GRMZM2G131080 GRMZM2G158359 GRMZM2G408897 GRMZM5G859049 AC209072.3_FG011 Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:8 GRMZM2G119226 GRMZM2G088112 GRMZM2G388574 AC215311.3_FG002 GRMZM2G175398 GRMZM5G859431 GRMZM2G440803 GRMZM2G440820 GRMZM2G440855 GRMZM2G424682 GRMZM2G444567 GRMZM2G148156 AC203531.3_FG002 GRMZM2G095964 GRMZM2G111898 GRMZM2G111948 GRMZM2G120536 GRMZM2G127958 GRMZM2G127972 GRMZM2G081892 GRMZM2G407273 WIP1 (GRMZM2G156632) GRMZM2G156708 GRMZM2G156713 GRMZM2G456830 GRMZM2G450206 GRMZM2G450217 GRMZM2G450228 GRMZM2G131994 CRS2 (GRMZM2G132021) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:1 ZmHK1b1 (GRMZM2G155767) GRMZM2G046849 GRMZM2G046966 GRMZM2G511542 GRMZM2G348349 GRMZM2G047055 GRMZM2G423423 GRMZM2G059981 GRMZM2G059964 GRMZM2G359929 GRMZM2G518427 GRMZM2G073912 GRMZM5G863645 GRMZM5G865188 GRMZM2G015073 GRMZM5G867390 GRMZM2G050081 GRMZM5G862643 GRMZM5G813124 GRMZM2G349035 GRMZM2G583462 GRMZM5G826838 GRMZM5G848720 GRMZM5G825695 GRMZM2G423634 GRMZM2G556330 AC231640.1_FG009 GRMZM2G412814 GRMZM2G412793 GRMZM5G809482 Click to show this node (Sorghum bicolor) Sorghum bicolor duplication node (click to collapse) Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:1 SB01G009810 (Sb01g009810) SB01G009820 (Sb01g009820) SB01G009830 (Sb01g009830) SB01G009835 (Sb01g009835) SB01G009840 (Sb01g009840) SB01G009850 (Sb01g009850) SB01G009860 (Sb01g009860) SB01G009863 (Sb01g009863) SB01G009866 (Sb01g009866) SB01G009870 (Sb01g009870) SB01G009880 (Sb01g009880) SB01G009890 (Sb01g009890) SB01G009900 (Sb01g009900) SB01G009910 (Sb01g009910) SB01G009933 (Sb01g009933) SB01G009936 (Sb01g009936) SB01G009940 (Sb01g009940) SB01G009950 (Sb01g009950) SB01G009960 (Sb01g009960) SB01G009965 (Sb01g009965) SB01G009970 (Sb01g009970) SB01G009980 (Sb01g009980) SB01G009990 (Sb01g009990) SB01G009995 (Sb01g009995) SB01G010000 (Sb01g010000) SB01G010010 (Sb01g010010) SB01G010020 (Sb01g010020) SB01G010025 (Sb01g010025) AC1 (Sb01g010030) Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:1 SB01G009800 (Sb01g009800) SB01G009810 (Sb01g009810) SB01G009820 (Sb01g009820) SB01G009830 (Sb01g009830) SB01G009835 (Sb01g009835) SB01G009840 (Sb01g009840) SB01G009850 (Sb01g009850) SB01G009860 (Sb01g009860) SB01G009863 (Sb01g009863) SB01G009866 (Sb01g009866) SB01G009870 (Sb01g009870) SB01G009880 (Sb01g009880) SB01G009890 (Sb01g009890) SB01G009900 (Sb01g009900) SB01G009910 (Sb01g009910) SB01G009933 (Sb01g009933) SB01G009936 (Sb01g009936) SB01G009940 (Sb01g009940) SB01G009950 (Sb01g009950) SB01G009960 (Sb01g009960) SB01G009965 (Sb01g009965) SB01G009970 (Sb01g009970) SB01G009980 (Sb01g009980) SB01G009990 (Sb01g009990) SB01G009995 (Sb01g009995) SB01G010000 (Sb01g010000) SB01G010010 (Sb01g010010) SB01G010020 (Sb01g010020) SB01G010025 (Sb01g010025) Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - scaffold_9 Si035411m.g Si035791m.g Si034255m.g Si034136m.g Si039561m.g Si037973m.g Si039354m.g Si036818m.g Si040744m.g Si034811m.g Si039987m.g Si037256m.g Si036070m.g Si034833m.g Si036340m.g Si040351m.g Si038786m.g Si038436m.g Si040517m.g Si033999m.g Si036077m.g Si034805m.g Si038211m.g Si035144m.g Si040754m.g Si034686m.g Si038564m.g Si036975m.g Si040760m.g Si036200m.g Click to hide this line (Panicoideae) Panicoideae speciation node (click to collapse) Panicoideae Click to show this node (Andropogoneae) Andropogoneae speciation node (click to collapse) Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:GL003512.1 Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - scaffold_8 Si026652m.g Si027812m.g Si027906m.g Si027575m.g Si026986m.g Si027223m.g Si028634m.g Si026646m.g Si026572m.g Si028136m.g Si026570m.g Si026470m.g Si028167m.g Si025907m.g Si028279m.g Si027060m.g Si025997m.g Si028592m.g Si027974m.g Si025900m.g Si028139m.g Si028028m.g Si028610m.g Si027886m.g Si027198m.g Si026819m.g Si027019m.g Si026053m.g Si026215m.g Si025861m.g Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:8 GSMUA_Achr8G05980_001 GSMUA_Achr8G05990_001 GSMUA_Achr8G06000_001 GSMUA_Achr8G06010_001 GSMUA_Achr8G06020_001 GSMUA_Achr8G06030_001 GSMUA_Achr8G06040_001 GSMUA_Achr8G06050_001 GSMUA_Achr8G06060_001 GSMUA_Achr8G06070_001 GSMUA_Achr8G06080_001 GSMUA_Achr8G06090_001 GSMUA_Achr8G06100_001 GSMUA_Achr8G06110_001 GSMUA_Achr8G06120_001 GSMUA_Achr8G06140_001 GSMUA_Achr8G06150_001 GSMUA_Achr8G06160_001 GSMUA_Achr8G06170_001 GSMUA_Achr8G06180_001 GSMUA_Achr8G06190_001 GSMUA_Achr8G06200_001 GSMUA_Achr8G06220_001 GSMUA_Achr8G06230_001 GSMUA_Achr8G06240_001 GSMUA_Achr8G06250_001 GSMUA_Achr8G06260_001 GSMUA_Achr8G06270_001 GSMUA_Achr8G06280_001 Click to hide this line (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Magnoliophyta Click to hide this line (commelinids) commelinids speciation node (click to collapse) commelinids Click to show this node (Poaceae) Poaceae speciation node (click to collapse) Click to show this node (Panicoideae) Panicoideae speciation node (click to collapse) Click to show this node (Andropogoneae) Andropogoneae speciation node (click to collapse) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:7 GRMZM5G822679 GRMZM2G523818 GRMZM2G369277 GRMZM2G369284 GRMZM2G068006 GRMZM2G068008 GRMZM2G470010 GRMZM2G145654 GRMZM2G145633 GRMZM2G350205 GRMZM5G891809 GRMZM2G044060 GRMZM2G044174 AC204845.3_FG008 GRMZM2G044194 GRMZM2G509794 GRMZM2G438652 GRMZM2G006071 GRMZM2G008234 GRMZM2G008061 GRMZM2G007936 GRMZM2G456997 GRMZM2G457001 AC209793.3_FG003 GRMZM5G898390 GRMZM5G858923 GRMZM2G437187 AC195399.3_FG004 pr1 (GRMZM2G465226) GRMZM2G165108 Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:5 GSMUA_Achr5G27160_001 GSMUA_Achr5G27170_001 GSMUA_Achr5G27180_001 GSMUA_Achr5G27190_001 GSMUA_Achr5G27200_001 GSMUA_Achr5G27210_001 GSMUA_Achr5G27220_001 GSMUA_Achr5G27230_001 GSMUA_Achr5G27240_001 GSMUA_Achr5G27250_001 GSMUA_Achr5G27260_001 GSMUA_Achr5G27270_001 GSMUA_Achr5G27280_001 GSMUA_Achr5G27290_001 GSMUA_Achr5G27300_001 GSMUA_Achr5G27320_001 GSMUA_Achr5G27330_001 GSMUA_Achr5G27340_001 GSMUA_Achr5G27350_001 GSMUA_Achr5G27360_001 GSMUA_Achr5G27370_001 GSMUA_Achr5G27380_001 GSMUA_Achr5G27390_001 GSMUA_Achr5G27400_001 GSMUA_Achr5G27410_001 GSMUA_Achr5G27420_001 GSMUA_Achr5G27430_001 GSMUA_Achr5G27440_001 GSMUA_Achr5G27450_001 GSMUA_Achr5G27460_001 Click to show this node (core eudicotyledons) core eudicotyledons speciation node (click to collapse) Click to show this node (rosids) rosids speciation node (click to collapse) Click to show this node (Brassicaceae) Brassicaceae speciation node (click to collapse) Click to hide this line (Brassica rapa subsp. pekinensis) Brassica rapa subsp. pekinensis terminal node Brassica rapa subsp. pekinensis - Chr:A03 Bra001635 (Bra001635) Bra001636 (Bra001636) Bra001637 (Bra001637) Bra001638 (Bra001638) Bra001639 (Bra001639) Bra001640 (Bra001640) Bra001641 (Bra001641) Bra001642 (Bra001642) Bra001643 (Bra001643) Bra001644 (Bra001644) Bra001645 (Bra001645) Bra001646 (Bra001646) Bra001647 (Bra001647) Bra001648 (Bra001648) Bra001649 (Bra001649) Bra001651 (Bra001651) Bra001652 (Bra001652) Bra001653 (Bra001653) Bra001654 (Bra001654) Bra001655 (Bra001655) Bra001656 (Bra001656) Bra001657 (Bra001657) Bra001658 (Bra001658) Bra001659 (Bra001659) Bra001660 (Bra001660) Bra001661 (Bra001661) Bra001662 (Bra001662) Bra001663 (Bra001663) Bra001664 (Bra001664) Bra001665 (Bra001665) Click to hide this line (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Magnoliophyta Click to hide this line (commelinids) commelinids speciation node (click to collapse) commelinids Click to show this node (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis duplication node (click to collapse) Click to show this node (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis duplication node (click to collapse) Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:4 GSMUA_Achr4G32800_001 GSMUA_Achr4G32810_001 GSMUA_Achr4G32820_001 GSMUA_Achr4G32830_001 GSMUA_Achr4G32840_001 GSMUA_Achr4G32850_001 GSMUA_Achr4G32860_001 GSMUA_Achr4G32870_001 GSMUA_Achr4G32880_001 GSMUA_Achr4G32890_001 GSMUA_Achr4G32900_001 GSMUA_Achr4G32910_001 GSMUA_Achr4G32920_001 GSMUA_Achr4G32950_001 GSMUA_Achr4G32960_001 GSMUA_Achr4G32970_001 GSMUA_Achr4G32980_001 GSMUA_Achr4G32990_001 GSMUA_Achr4G33000_001 GSMUA_Achr4G33010_001 GSMUA_Achr4G33020_001 GSMUA_Achr4G33030_001 GSMUA_Achr4G33040_001 GSMUA_Achr4G33050_001 GSMUA_Achr4G33060_001 GSMUA_Achr4G33070_001 GSMUA_Achr4G33080_001 GSMUA_Achr4G33090_001 Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:4 GSMUA_Achr4G32780_001 GSMUA_Achr4G32800_001 GSMUA_Achr4G32810_001 GSMUA_Achr4G32820_001 GSMUA_Achr4G32830_001 GSMUA_Achr4G32840_001 GSMUA_Achr4G32850_001 GSMUA_Achr4G32860_001 GSMUA_Achr4G32870_001 GSMUA_Achr4G32880_001 GSMUA_Achr4G32890_001 GSMUA_Achr4G32900_001 GSMUA_Achr4G32910_001 GSMUA_Achr4G32920_001 GSMUA_Achr4G32950_001 GSMUA_Achr4G32960_001 GSMUA_Achr4G32970_001 GSMUA_Achr4G32980_001 GSMUA_Achr4G32990_001 GSMUA_Achr4G33000_001 GSMUA_Achr4G33010_001 GSMUA_Achr4G33020_001 GSMUA_Achr4G33030_001 GSMUA_Achr4G33040_001 GSMUA_Achr4G33050_001 GSMUA_Achr4G33060_001 GSMUA_Achr4G33070_001 GSMUA_Achr4G33080_001 Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:6 GSMUA_Achr6G00010_001 GSMUA_Achr6G00020_001 GSMUA_Achr6G00030_001 GSMUA_Achr6G00040_001 GSMUA_Achr6G00050_001 GSMUA_Achr6G00060_001 GSMUA_Achr6G00070_001 GSMUA_Achr6G00090_001 GSMUA_Achr6G00100_001 GSMUA_Achr6G00110_001 GSMUA_Achr6G00120_001 GSMUA_Achr6G00130_001 GSMUA_Achr6G00140_001 GSMUA_Achr6G00150_001 GSMUA_Achr6G00160_001 GSMUA_Achr6G00170_001 GSMUA_Achr6G00180_001 GSMUA_Achr6G00190_001 GSMUA_Achr6G00200_001 GSMUA_Achr6G00210_001 GSMUA_Achr6G00230_001 Click to hide this line (Poaceae) Poaceae speciation node (click to collapse) Poaceae Click to hide this line (BEP clade) BEP clade speciation node (click to collapse) BEP clade Click to hide this line (Pooideae) Pooideae speciation node (click to collapse) Pooideae Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:1 BRADI1G08270 BRADI1G08280 BRADI1G08287 BRADI1G08294 BRADI1G08301 BRADI1G08310 BRADI1G08320 BRADI1G08326 BRADI1G08332 FUL1 (BRADI1G08340) BRADI1G08350 BRADI1G08357 BRADI1G08370 BRADI1G08380 BRADI1G08390 BRADI1G08410 BRADI1G08420 BRADI1G08430 BRADI1G08440 BRADI1G08450 BRADI1G08460 BRADI1G08470 BRADI1G08480 BRADI1G08490 BRADI1G08500 BRADI1G08510 BRADI1G08517 BRADI1G08530 BRADI1G08540 BRADI1G08550 Click to hide this line (Hordeum vulgare subsp. vulgare) Hordeum vulgare subsp. vulgare terminal node Hordeum vulgare subsp. vulgare - Chr:morex_scaffold_106547 Click to hide this line (Oryza) Oryza speciation node (click to collapse) Oryza Click to hide this line (Oryza sativa) Oryza sativa speciation node (click to collapse) Oryza sativa Click to hide this line (Oryza sativa Japonica Group) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:3 LOC_Os03g53930 LOC_Os03g53939 LOC_Os03g53950 LOC_Os03g53960 LOC_Os03g53970 LOC_Os03g53980 LOC_Os03g53990 LOC_Os03g54000 LOC_Os03g54010 LOC_Os03g54020 LOC_Os03g54030 LOC_Os03g54040 LOC_Os03g54050 LOC_Os03g54063 LOC_Os03g54070 LOC_Os03g54091 LOC_Os03g54100 LOC_Os03g54114 LOC_Os03g54130 LOC_Os03g54150 LOC_Os03g54160 LOC_Os03g54170 LOC_Os03g54180 LOC_Os03g54190 LOC_Os03g54200 LOC_Os03g54210 LOC_Os03g54220 LOC_Os03g54230 LOC_Os03g54240 LOC_Os03g54244 Click to hide this line (Oryza sativa Indica Group) Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:3 OS03G0749500 (BGIOSGA013563) OS03G0749800 (BGIOSGA009807) OSJNBA0047E24.28 (BGIOSGA013564) OSJNBA0047E24.27 (BGIOSGA009806) OsI_13520 (BGIOSGA009805) OS03G0750200 (BGIOSGA013565) OsI_13522 (BGIOSGA013566) OS03G0750700 (BGIOSGA009804) BGIOSGA009803 OsI_13525 (BGIOSGA009802) OSJNBA0047E24.19 (BGIOSGA013567) OsI_13527 (BGIOSGA013568) OSJNBA0047E24.17 (BGIOSGA009801) OSJNBA0032E21.12 (BGIOSGA013569) OSJNBA0032E21.09 (BGIOSGA013570) SPO11-1 (BGIOSGA013572) OJ1112_G08.8 (BGIOSGA009800) OSJNBA0047E24.6 (BGIOSGA009799) OSJNBA0032E21.07 (BGIOSGA013573) OJ1112_G08.11 (BGIOSGA013574) OJ1112_G08.12 (BGIOSGA013575) OsI_13538 (BGIOSGA009798) OS03G0753100 (BGIOSGA009797) OJ1112_G08.15 (BGIOSGA013576) OSJNBA0032E21.02 (BGIOSGA009796) OSJNBA0032E21.01 (BGIOSGA009795) OsI_13543 (BGIOSGA009794) OsI_13544 (BGIOSGA009793) OJ1112_G08.20 (BGIOSGA009792) OsI_13546 (BGIOSGA009791) Click to hide this line (Oryza glaberrima) Oryza glaberrima terminal node Oryza glaberrima - Chr:3 ORGLA03G0312800 ORGLA03G0312900 ORGLA03G0313000 ORGLA03G0313100 ORGLA03G0313200 ORGLA03G0313300 ORGLA03G0313400 ORGLA03G0313500 ORGLA03G0313600 ORGLA03G0313700 ORGLA03G0313800 ORGLA03G0313900 ORGLA03G0314000 ORGLA03G0314100 ORGLA03G0314200 ORGLA03G0314400 ORGLA03G0314500 ORGLA03G0314600 ORGLA03G0314700 ORGLA03G0314800 ORGLA03G0314900 ORGLA03G0315000 ORGLA03G0315100 ORGLA03G0315200 ORGLA03G0315300 ORGLA03G0315400 ORGLA03G0315500 ORGLA03G0315600 ORGLA03G0315700 ORGLA03G0315800 Click to hide this line (Oryza brachyantha) Oryza brachyantha terminal node Oryza brachyantha - Chr:3 OB03G41270 OB03G41280 OB03G41290 OB03G41300 OB03G41310 OB03G41320 OB03G41330 OB03G41340 OB03G41350 OB03G41360 OB03G41380 OB03G41390 OB03G41400 OB03G41410 OB03G41430 OB03G41440 OB03G41450 OB03G41460 OB03G41470 OB03G41480 OB03G41490 OB03G41500 OB03G41510 OB03G41520 OB03G41530 OB03G41540 OB03G41550 OB03G41560 OB03G41570 Click to hide this line (Panicoideae) Panicoideae speciation node (click to collapse) Panicoideae Click to hide this line (Andropogoneae) Andropogoneae speciation node (click to collapse) Andropogoneae Click to show this node (Zea mays) Zea mays duplication node (click to collapse) Click to show this node (Zea mays) Zea mays duplication node (click to collapse) Click to show this node (Zea mays) Zea mays duplication node (click to collapse) Click to show this node (Zea mays) Zea mays duplication node (click to collapse) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:2 GRMZM5G887364 GRMZM5G867802 GRMZM5G851531 GRMZM2G494478 GRMZM2G014400 GRMZM2G112954 GRMZM5G835362 GRMZM2G034927 GRMZM2G034764 GRMZM5G862554 GRMZM2G113848 AC206322.3_FG001 GRMZM2G403800 GRMZM2G105207 GRMZM2G105302 GRMZM2G351417 GRMZM2G003933 GRMZM5G881349 GRMZM2G003937 GRMZM2G129575 GRMZM2G454377 GRMZM2G454474 GRMZM2G454483 GRMZM2G575305 GRMZM2G321142 GRMZM2G021151 GRMZM2G019060 GRMZM2G028905 GRMZM5G808394 GRMZM2G090233 Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:7 AC199396.4_FG008 GRMZM2G095806 GRMZM2G472869 GRMZM2G148892 GRMZM2G148864 GRMZM2G450069 GRMZM2G162086 GRMZM2G162082 GRMZM2G162893 GRMZM2G015520 AC203770.3_FG004 GRMZM2G393455 GRMZM2G092131 GRMZM2G162167 GRMZM5G851999 GRMZM2G171884 GRMZM2G171871 AC216042.3_FG006 GRMZM5G815377 GRMZM2G357040 AC216042.3_FG004 GRMZM2G058208 GRMZM2G058173 URM1 (GRMZM2G179689) GRMZM2G046177 GRMZM2G046186 GRMZM5G829293 AC225348.3_FG002 GRF10 (GRMZM2G096709) GRMZM2G096824 Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:5 GRMZM2G072231 GRMZM5G883008 AC197034.3_FG010 GRMZM2G072071 GRMZM5G875251 GRMZM5G832630 GRMZM2G371942 Bk2L4 (GRMZM2G071970) GRMZM2G071917 GRMZM2G071745 m31 (GRMZM2G071620) m15 (GRMZM2G553379) GRMZM2G130065 GRMZM2G130053 GRMZM2G129913 AC191434.3_FG004 GRMZM2G129865 GRMZM2G432176 GRMZM2G129817 AC185628.3_FG010 GRMZM2G172132 GRMZM2G172043 GRMZM5G824862 gla3 (GRMZM2G473711) GRMZM2G473697 GRMZM5G894145 GRMZM2G172011 GRMZM2G171998 GRMZM2G171987 GRMZM5G886820 Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:8 lcyE (GRMZM2G012966) GRMZM2G318121 GRMZM2G165454 GRMZM2G165428 GRMZM2G463133 GRMZM2G142987 AC196426.3_FG008 AC196426.3_FG007 GRMZM2G096655 AC201807.3_FG003 GRMZM2G539705 GRMZM2G395771 GRMZM2G096764 GRMZM2G050553 GRMZM2G027333 GRMZM2G501124 AC204393.3_FG005 AC204393.3_FG006 GRMZM2G144239 ZmGR2b (GRMZM2G142705) GRMZM2G114878 GRMZM2G114895 GRMZM2G420119 AC187087.4_FG003 GRMZM2G046037 AC187087.4_FG001 GRMZM5G898394 GRMZM2G054900 GRMZM2G054876 GRMZM5G836325 Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:1 GRMZM2G589058 GRMZM2G177867 GRMZM2G177928 GRMZM2G177974 GRMZM5G815323 GRMZM2G120484 GRMZM2G421500 GRMZM2G421491 GRMZM2G421498 AC205111.3_FG001 GRMZM2G058158 GRMZM2G516809 GRMZM2G058144 GRMZM2G058032 GRMZM5G843115 GRMZM2G357074 GRMZM2G083677 GRMZM2G464782 AC192452.3_FG005 GRMZM2G164249 GRMZM5G810254 GRMZM2G164233 AC192452.3_FG002 GRMZM2G032962 ZMM4 (GRMZM2G032339) AC186341.4_FG002 GRMZM2G316805 GRMZM2G087095 GRMZM2G513287 GRMZM2G021781 Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:1 SB01G007705 (Sb01g007705) 170F8.4 (Sb01g007710) 170F8.3 (Sb01g007720) 170F8.2 (Sb01g007730) 170F8.1 (Sb01g007740) SB01G007750 (Sb01g007750) SB01G007760 (Sb01g007760) CYB5 (Sb01g007770) SB01G007780 (Sb01g007780) SB01G007790 (Sb01g007790) SB01G007800 (Sb01g007800) Sb01g007810 SB01G007820 (Sb01g007820) SB01G007830 (Sb01g007830) SB01G007840 (Sb01g007840) SB01G007855 (Sb01g007855) SB01G007860 (Sb01g007860) SB01G007870 (Sb01g007870) SB01G007872 (Sb01g007872) SB01G007874 (Sb01g007874) SB01G007876 (Sb01g007876) SB01G007878 (Sb01g007878) SB01G007880 (Sb01g007880) SB01G007890 (Sb01g007890) SB01G007900 (Sb01g007900) SB01G007910 (Sb01g007910) SB01G007920 (Sb01g007920) SB01G007930 (Sb01g007930) SB01G007940 (Sb01g007940) SB01G007950 (Sb01g007950) Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - scaffold_9 Si034278m.g Si038787m.g Si035820m.g Si035669m.g Si037994m.g PAP2 (Si037197m.g) Si039860m.g FUL1 (Si037627m.g) Si034953m.g Si036402m.g Si038527m.g Si037336m.g Si036417m.g Si036131m.g Si038380m.g Si038028m.g Si034803m.g Si034415m.g Si033905m.g Si038100m.g Si036087m.g Si034940m.g Si036007m.g Si033948m.g Si039703m.g Si037683m.g Si037215m.g Si034545m.g Si038457m.g Click to show this node (core eudicotyledons) core eudicotyledons duplication node (click to collapse) Click to hide this line (core eudicotyledons) core eudicotyledons speciation node (click to collapse) core eudicotyledons Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch07 PGSC0003DMG402017380 (PGSC0003DMG402017380) PGSC0003DMG401017380 (PGSC0003DMG401017380) PGSC0003DMG400017379 (PGSC0003DMG400017379) PGSC0003DMG400017378 (PGSC0003DMG400017378) PGSC0003DMG400035925 (PGSC0003DMG400035925) PGSC0003DMG400034984 (PGSC0003DMG400034984) PGSC0003DMG400017403 (PGSC0003DMG400017403) PGSC0003DMG400017402 (PGSC0003DMG400017402) PGSC0003DMG400017401 (PGSC0003DMG400017401) PGSC0003DMG400017400 (PGSC0003DMG400017400) PGSC0003DMG400017399 (PGSC0003DMG400017399) PGSC0003DMG400017376 (PGSC0003DMG400017376) PGSC0003DMG400017375 (PGSC0003DMG400017375) PGSC0003DMG400017398 (PGSC0003DMG400017398) PGSC0003DMG400017397 (PGSC0003DMG400017397) PGSC0003DMG400017374 (PGSC0003DMG400017374) PGSC0003DMG400017373 (PGSC0003DMG400017373) PGSC0003DMG400017394 (PGSC0003DMG400017394) PGSC0003DMG400017370 (PGSC0003DMG400017370) PGSC0003DMG400036924 (PGSC0003DMG400036924) PGSC0003DMG400017393 (PGSC0003DMG400017393) PGSC0003DMG400017369 (PGSC0003DMG400017369) PGSC0003DMG400017368 (PGSC0003DMG400017368) PGSC0003DMG400037166 (PGSC0003DMG400037166) PGSC0003DMG400029184 (PGSC0003DMG400029184) PGSC0003DMG400029180 (PGSC0003DMG400029180) PGSC0003DMG400029183 (PGSC0003DMG400029183) PGSC0003DMG402029181 (PGSC0003DMG402029181) PGSC0003DMG400029182 (PGSC0003DMG400029182) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:7 Solyc07g045320.2 Solyc07g045330.2 Solyc07g045340.2 Solyc07g045350.2 Solyc07g045370.2 Solyc07g045380.2 Solyc07g045390.1 Solyc07g045400.1 Solyc07g045410.1 Solyc07g045420.2 Solyc07g045430.2 Solyc07g045440.1 Solyc07g045450.1 Solyc07g045460.2 Solyc07g045470.1 Solyc07g045490.1 Solyc07g045500.1 Solyc07g045510.2 Solyc07g045520.2 Solyc07g045530.1 Solyc07g045540.2 Solyc07g045550.1 Solyc07g045560.1 Solyc07g045570.1 Solyc07g045580.1 Solyc07g045590.1 Solyc07g045600.1 Solyc07g045610.1 Solyc07g047610.2 Click to show this node (rosids) rosids speciation node (click to collapse) Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:12 Vv12s0057g00800 Vv12s0057g00810 Vv12s0057g00820 Vv12s0057g00860 Vv12s0057g00870 Vv12s0057g00880 Vv12s0057g00890 Vv12s0057g00900 Vv12s0057g00910 Vv12s0057g00920 Vv12s0057g00930 Vv12s0057g00940 Vv12s0057g00950 Vv12s0057g00960 Vv12s0057g00970 Vv12s0057g00990 Vv12s0057g01000 Vv12s0057g01010 Vv12s0057g01020 Vv12s0057g01030 Vv12s0057g01040 Vv12s0057g01050 Vv12s0057g01060 Vv12s0057g01070 Vv12s0057g01080 Vv12s0057g01090 Vv12s0057g01100 Vv12s0057g01110 Vv12s0057g01120 Vv12s0057g01130 Click to show this node (core eudicotyledons) core eudicotyledons speciation node (click to collapse) Click to show this node (rosids) rosids speciation node (click to collapse) Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis Click to hide this line (Arabidopsis lyrata subsp. lyrata) Arabidopsis lyrata subsp. lyrata terminal node Arabidopsis lyrata subsp. lyrata - Chr:7 XM_002868388.1 (fgenesh1_pg.C_scaffold_7002738) XM_002868389.1 (Al_scaffold_0007_3163) XM_002870399.1 (fgenesh2_kg.7__3066__AT5G35750.1) XM_002870400.1 (fgenesh2_kg.7__3067__AT5G35753.1) XM_002870401.1 (Al_scaffold_0007_3167) XM_002868390.1 (Al_scaffold_0007_3168) XM_002868391.1 (scaffold_703449.1) XM_002868392.1 (fgenesh1_pg.C_scaffold_7002743) XM_002868393.1 (scaffold_703451.1) XM_002870402.1 (Al_scaffold_0007_3172) XM_002870403.1 (fgenesh2_kg.7__3069__AT5G35790.1) XM_002870404.1 (scaffold_703454.1) XM_002870405.1 (Al_scaffold_0007_3175) XM_002868394.1 (scaffold_703455.1) XM_002868396.1 (scaffold_703458.1) XM_002868397.1 (Al_scaffold_0007_3181) XM_002868398.1 (fgenesh2_kg.7__3071__AT5G35870.1) XM_002870406.1 (fgenesh1_pg.C_scaffold_7002750) XM_002868399.1 (fgenesh1_pg.C_scaffold_7002751) XM_002868400.1 (scaffold_703464.1) XM_002868401.1 (fgenesh2_kg.7__3073__AT5G43730.1) XM_002870407.1 (Al_scaffold_0007_3187) XM_002870408.1 (Al_scaffold_0007_3188) XM_002868402.1 (scaffold_703467.1) XM_002870409.1 (fgenesh1_pm.C_scaffold_7002445) XM_002868403.1 (fgenesh2_kg.7__3076__AT5G35940.1) XM_002870410.1 (Al_scaffold_0007_3192) XM_002870411.1 (fgenesh1_pg.C_scaffold_7002757) XM_002870412.1 (scaffold_703471.1) Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:5 AT5G35698 (AT5G35698) FIM2 (AT5G35700) CYP71B8 (AT5G35715) AT5G35730 (AT5G35730) AT5G35732 (AT5G35732) AT5G35735 (AT5G35735) AT5G35737 (AT5G35737) AHK2 (AT5G35750) AT5G35753 (AT5G35753) AT5G35760 (AT5G35760) SAP (AT5G35770) G6PD1 (AT5G35790) AT5G35810 (AT5G35810) AT5G35830 (AT5G35830) AT5G35870 (AT5G35870) AT5G35890 (AT5G35890) LBD35 (AT5G35900) AT5G35910 (AT5G35910) CYP79A3P (AT5G35917) CYP79A4P (AT5G35920) AT5G35926 (AT5G35926) AT5G35930 (AT5G35930) AT5G35940 (AT5G35940) AT5G35945 (AT5G35945) AT5G35950 (AT5G35950) AT5G35960 (AT5G35960) AT5G35970 (AT5G35970) YAK1 (AT5G35980) AT5G35995 (AT5G35995) Click to hide this line (Brassica rapa subsp. pekinensis) Brassica rapa subsp. pekinensis terminal node Brassica rapa subsp. pekinensis - Chr:A05 Bra018555 (Bra018555) Bra018556 (Bra018556) Bra018557 (Bra018557) Bra018558 (Bra018558) Bra018559 (Bra018559) Bra018560 (Bra018560) Bra018561 (Bra018561) Bra018562 (Bra018562) Bra018563 (Bra018563) Bra039479 (Bra039479) Bra039480 (Bra039480) Bra039481 (Bra039481) Bra039482 (Bra039482) Bra039483 (Bra039483) Bra039484 (Bra039484) Bra039486 (Bra039486) Bra039487 (Bra039487) Bra039488 (Bra039488) Bra039489 (Bra039489) Bra039490 (Bra039490) Bra039491 (Bra039491) Bra039492 (Bra039492) Bra039493 (Bra039493) Bra039494 (Bra039494) Bra039495 (Bra039495) Bra039496 (Bra039496) Bra039497 (Bra039497) Bra039498 (Bra039498) Bra039499 (Bra039499) Bra039500 (Bra039500) Click to show this node (Magnoliophyta) Magnoliophyta duplication node (click to collapse) Click to hide this line (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Magnoliophyta Click to show this node (core eudicotyledons) core eudicotyledons duplication node (click to collapse) Click to show this node (core eudicotyledons) core eudicotyledons speciation node (click to collapse) Click to hide this line (rosids) rosids speciation node (click to collapse) rosids Click to show this node (fabids) fabids speciation node (click to collapse) Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm09 GLYMA09G03860 GLYMA09G03870 GLYMA09G03881 GLYMA09G03891 WRKY26 (GLYMA09G03900) GMA.57462 (GLYMA09G03910) GLYMA09G03920 GLYMA09G03930 GLYMA09G03936 GLYMA09G03942 GLYMA09G03948 GLYMA09G03954 GLYMA09G03960 GLYMA09G03970 GLYMA09G03980 GLYMA09G04000 GLYMA09G04005 GLYMA09G04010 GLYMA09G04031 GLYMA09G04050 GLYMA09G04060 GLYMA09G04080 GLYMA09G04090 GLYMA09G04100 GLYMA09G04110 GLYMA09G04125 GLYMA09G04140 GLYMA09G04150 GLYMA09G04161 GLYMA09G04170 Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm15 GLYMA15G14770 GLYMA15G14780 GLYMA15G14790 GLYMA15G14810 GLYMA15G14825 GLYMA15G14840 GLYMA15G14860 GMA.26711 (GLYMA15G14870) GLYMA15G14890 GLYMA15G14893 GLYMA15G14896 GLYMA15G14900 GLYMA15G14930 GLYMA15G14950 GLYMA15G14970 GLYMA15G15010 GLYMA15G15020 GLYMA15G15025 GLYMA15G15030 GLYMA15G15043 GLYMA15G15056 GLYMA15G15070 GLYMA15G15080 GLYMA15G15090 GLYMA15G15100 GLYMA15G15105 GLYMA15G15110 GLYMA15G15121 GLYMA15G15130 GLYMA15G15133 Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm07 GLYMA07G11630 GLYMA07G11650 GLYMA07G11660 GLYMA07G11670 GLYMA07G11680 GLYMA07G11690 GLYMA07G11700 GLYMA07G11710 GLYMA07G11720 GLYMA07G11726 GLYMA07G11733 GLYMA07G11740 GLYMA07G11750 GLYMA07G11760 GLYMA07G11780 GLYMA07G11800 GLYMA07G11810 GLYMA07G11822 GLYMA07G11834 FCL1 (GLYMA07G11847) GLYMA07G11860 GLYMA07G11865 GLYMA07G11870 GLYMA07G11880 GLYMA07G11890 GLYMA07G11896 GLYMA07G11903 GLYMA07G11910 GLYMA07G11930 GLYMA07G11941 Click to show this node (Brassicaceae) Brassicaceae duplication node (click to collapse) Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis Click to hide this line (Arabidopsis lyrata subsp. lyrata) Arabidopsis lyrata subsp. lyrata terminal node Arabidopsis lyrata subsp. lyrata - Chr:3 XM_002884138.1 (fgenesh2_kg.3__3538__AT2G18940.1) XM_002884139.1 (fgenesh1_pg.C_scaffold_3003334) XM_002884140.1 (scaffold_304324.1) XM_002884141.1 (fgenesh2_kg.3__3542__AT2G18900.1) XM_002886208.1 (scaffold_304326.1) XM_002886209.1 (scaffold_304327.1) XM_002886210.1 (fgenesh2_kg.3__3545__AT2G18876.1) XM_002884142.1 (Al_scaffold_0003_3947) XM_002886211.1 (Al_scaffold_0003_3948) XM_002886212.1 (Al_scaffold_0003_3950) XM_002884143.1 (scaffold_304333.1) XM_002886213.1 (fgenesh1_pm.C_scaffold_3002890) XM_002886214.1 (fgenesh2_kg.3__3550__AT2G18840.1) XM_002886215.1 (scaffold_304336.1) XM_002886216.1 (fgenesh1_pg.C_scaffold_3003345) XM_002884144.1 (fgenesh2_kg.3__3553__AT2G18780.1) XM_002886218.1 (fgenesh2_kg.3__3554__AT2G18770.1) XM_002886219.1 (Al_scaffold_0003_3959) XM_002886220.1 (scaffold_304343.1) XM_002886221.1 (scaffold_304344.1) XM_002884145.1 (Al_scaffold_0003_3962) XM_002884146.1 (Al_scaffold_0003_3963) XM_002886222.1 (scaffold_304346.1) XM_002886223.1 (scaffold_304347.1) XM_002886224.1 (scaffold_304348.1) XM_002886225.1 (scaffold_304349.1) XM_002886226.1 (fgenesh2_kg.3__3559__AT2G20300.1) XM_002886227.1 (fgenesh1_pm.C_scaffold_3002898) XM_002884147.1 (Al_scaffold_0003_3969) XM_002886228.1 (scaffold_304353.1) Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:2 MEE16 (AT2G18650) PNP-A (AT2G18660) AT2G18670 (AT2G18670) AT2G18680 (AT2G18680) AT2G18690 (AT2G18690) TPS11 (AT2G18700) SCY1 (AT2G18710) AT2G18720 (AT2G18720) AT2G18721 (AT2G18721) ATDGK3 (AT2G18730) AT2G18740 (AT2G18740) AT2G18750 (AT2G18750) CHR8 (AT2G18760) AT2G18770 (AT2G18770) AT2G18780 (AT2G18780) XTH21 (AT2G18800) AT2G18810 (AT2G18810) AT2G18830 (AT2G18830) AT2G18840 (AT2G18840) AT2G18850 (AT2G18850) AT2G18860 (AT2G18860) VEL3 (AT2G18870) AT2G18876 (AT2G18876) VEL2 (AT2G18880) AT2G18890 (AT2G18890) AT2G18900 (AT2G18900) AT2G18910 (AT2G18910) ADO2 (AT2G18915) AT2G18920 (AT2G18920) AT2G18930 (AT2G18930) Click to hide this line (Brassica rapa subsp. pekinensis) Brassica rapa subsp. pekinensis terminal node Brassica rapa subsp. pekinensis - Chr:A05 Bra022207 (Bra022207) Bra022206 (Bra022206) Bra022205 (Bra022205) Bra022204 (Bra022204) Bra022203 (Bra022203) Bra022202 (Bra022202) Bra022201 (Bra022201) Bra022200 (Bra022200) Bra022199 (Bra022199) Bra022198 (Bra022198) Bra022197 (Bra022197) Bra022196 (Bra022196) Bra022195 (Bra022195) Bra022194 (Bra022194) Bra022193 (Bra022193) Bra022191 (Bra022191) Bra022190 (Bra022190) Bra022189 (Bra022189) Bra022188 (Bra022188) Bra022187 (Bra022187) Bra022186 (Bra022186) Bra022185 (Bra022185) Bra022184 (Bra022184) Bra022183 (Bra022183) Bra022182 (Bra022182) Bra022181 (Bra022181) Bra022180 (Bra022180) Bra022179 (Bra022179) Bra022178 (Bra022178) Bra022177 (Bra022177) Click to show this node (Brassicaceae) Brassicaceae speciation node (click to collapse) Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis Click to hide this line (Arabidopsis lyrata subsp. lyrata) Arabidopsis lyrata subsp. lyrata terminal node Arabidopsis lyrata subsp. lyrata - Chr:7 XM_002870117.1 (Al_scaffold_0007_2598) XM_002868093.1 (fgenesh1_pg.C_scaffold_7002295) XM_002870118.1 (scaffold_702863.1) XM_002868094.1 (fgenesh2_kg.7__2684__AT4G16350.1) XM_002868095.1 (fgenesh2_kg.7__2685__AT4G16340.1) XM_002868096.1 (fgenesh1_pg.C_scaffold_7002299) XM_002870119.1 (fgenesh2_kg.7__2687__AT4G16310.1) XM_002868097.1 (scaffold_702868.1) XM_002868098.1 (fgenesh2_kg.7__2690__AT4G16280.3) XM_002870120.1 (scaffold_702870.1) XM_002868099.1 (fgenesh2_kg.7__2692__AT4G16265.1) XM_002868100.1 (fgenesh1_pm.C_scaffold_7002113) XM_002870121.1 (scaffold_702873.1) XM_002870122.1 (fgenesh1_pg.C_scaffold_7002306) XM_002868101.1 (scaffold_702874.1) XM_002868103.1 (fgenesh1_pg.C_scaffold_7002309) XM_002870123.1 (scaffold_702876.1) XM_002870124.1 (scaffold_702877.1) XM_002870125.1 (fgenesh1_pg.C_scaffold_7002311) XM_002870126.1 (fgenesh1_pg.C_scaffold_7002312) XM_002868104.1 (scaffold_702880.1) XM_002870127.1 (scaffold_702881.1) XM_002868105.1 (Al_scaffold_0007_2619) XM_002868106.1 (scaffold_702883.1) XM_002870128.1 (scaffold_702884.1) XM_002868107.1 (Al_scaffold_0007_2622) XM_002868108.1 (scaffold_702887.1) XM_002868109.1 (Al_scaffold_0007_2624) XM_002870129.1 (scaffold_702888.1) XM_002870130.1 (scaffold_702890.1) Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:4 AT4G16146 (AT4G16146) AT4G16150 (AT4G16150) AT4G16155 (AT4G16155) ATOEP16-S (AT4G16160) AT4G16162 (AT4G16162) AT4G16165 (AT4G16165) AT4G16180 (AT4G16180) AT4G16190 (AT4G16190) AT4G16195 (AT4G16195) AT4G16200 (AT4G16200) ECHIA (AT4G16210) AT4G16215 (AT4G16215) AT4G16220 (AT4G16220) AT4G16230 (AT4G16230) AT4G16240 (AT4G16240) AT4G16260 (AT4G16260) NRPB9B (AT4G16265) AT4G16270 (AT4G16270) FCA (AT4G16280) SPH1 (AT4G16295) LDL3 (AT4G16310) AT4G16330 (AT4G16330) SPK1 (AT4G16340) CBL6 (AT4G16350) AT4G16360 (AT4G16360) ATOPT3 (AT4G16370) AT4G16380 (AT4G16380) SVR7 (AT4G16390) AT4G16400 (AT4G16400) AT4G16410 (AT4G16410) Click to hide this line (core eudicotyledons) core eudicotyledons speciation node (click to collapse) core eudicotyledons Click to hide this line (rosids) rosids speciation node (click to collapse) rosids Click to show this node (fabids) fabids speciation node (click to collapse) Click to show this node (Populus trichocarpa) Populus trichocarpa duplication node (click to collapse) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:8 POPTRDRAFT_765904 (POPTR_0008s10320) POPTR_0008s10330 POPTRDRAFT_656629 (POPTR_0008s10340) POPTRDRAFT_721056 (POPTR_0008s10350) POPTRDRAFT_564376 (POPTR_0008s10360) POPTR_0008s10370 POPTRDRAFT_656631 (POPTR_0008s10380) POPTRDRAFT_420847 (POPTR_0008s10390) POPTRDRAFT_765909 (POPTR_0008s10400) POPTRDRAFT_820558 (POPTR_0008s10410) POPTR_0008s10420 POPTRDRAFT_765913 (POPTR_0008s10430) POPTRDRAFT_874401 (POPTR_0008s10440) POPTRDRAFT_820561 (POPTR_0008s10450) POPTRDRAFT_803483 (POPTR_0008s10460) POPTRDRAFT_656642 (POPTR_0008s10480) POPTRDRAFT_765920 (POPTR_0008s10490) POPTRDRAFT_803486 (POPTR_0008s10500) POPTR_0008s10510 POPTRDRAFT_820564 (POPTR_0008s10520) POPTRDRAFT_832688 (POPTR_0008s10530) POPTR_0008s10540 POPTRDRAFT_820566 (POPTR_0008s10550) POPTRDRAFT_564394 (POPTR_0008s10560) POPTRDRAFT_564395 (POPTR_0008s10570) POPTRDRAFT_832690 (POPTR_0008s10580) POPTR_0008s10590 POPTR_0008s10600 POPTRDRAFT_656656 (POPTR_0008s10610) POPTRDRAFT_564400 (POPTR_0008s10620) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:10 POPTRDRAFT_833662 (POPTR_0010s15450) POPTR_0010s15460 POPTR_0010s15470 POPTRDRAFT_566828 (POPTR_0010s15480) POPTR_0010s15490 POPTRDRAFT_769827 (POPTR_0010s15500) POPTRDRAFT_225922 (POPTR_0010s15510) POPTR_0010s15520 POPTR_0010s15530 POPTRDRAFT_566833 (POPTR_0010s15540) POPTRDRAFT_769830 (POPTR_0010s15550) POPTR_0010s15560 POPTRDRAFT_885829 (POPTR_0010s15570) POPTRDRAFT_566835 (POPTR_0010s15580) POPTRDRAFT_723928 (POPTR_0010s15590) POPTRDRAFT_566841 (POPTR_0010s15610) POPTRDRAFT_822212 (POPTR_0010s15620) POPTRDRAFT_769838 (POPTR_0010s15630) POPTRDRAFT_659097 (POPTR_0010s15640) POPTRDRAFT_225946 (POPTR_0010s15650) POPTRDRAFT_805270 (POPTR_0010s15660) POPTRDRAFT_833666 (POPTR_0010s15670) POPTRDRAFT_822216 (POPTR_0010s15680) POPTR_0010s15690 POPTRDRAFT_769847 (POPTR_0010s15700) POPTR_0010s15710 POPTRDRAFT_566854 (POPTR_0010s15720) POPTR_0010s15730 POPTRDRAFT_820555 (POPTR_0010s15740) POPTRDRAFT_822219 (POPTR_0010s15750) Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:5 Vv05s0077g00780 Vv05s0077g00790 Vv05s0077g00800 Vv05s0077g00810 Vv05s0077g00820 Vv05s0077g00830 Vv05s0077g00840 Vv05s0077g00850 Vv05s0077g00860 Vv05s0077g00870 Vv05s0077g00880 Vv05s0077g00890 Vv05s0077g00900 Vv05s0077g00910 Vv05s0077g00920 Vv05s0077g00950 Vv05s0077g00960 Vv05s0077g00970 Vv05s0077g00980 Vv05s0077g00990 Vv05s0077g01000 Vv05s0077g01010 Vv05s0077g01020 Vv05s0077g01030 Vv05s0077g01040 Vv05s0077g01050 Vv05s0077g01060 Vv05s0077g01070 Vv05s0077g01080 Vv05s0077g01090 Click to show this node (Solanum) Solanum duplication node (click to collapse) Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch01 PGSC0003DMG400037652 (PGSC0003DMG400037652) PGSC0003DMG400034664 (PGSC0003DMG400034664) PGSC0003DMG400036527 (PGSC0003DMG400036527) PGSC0003DMG400038328 (PGSC0003DMG400038328) PGSC0003DMG400039982 (PGSC0003DMG400039982) PGSC0003DMG400041872 (PGSC0003DMG400041872) PGSC0003DMG400024021 (PGSC0003DMG400024021) PGSC0003DMG400036018 (PGSC0003DMG400036018) PGSC0003DMG400024022 (PGSC0003DMG400024022) PGSC0003DMG400044988 (PGSC0003DMG400044988) PGSC0003DMG400024023 (PGSC0003DMG400024023) PGSC0003DMG400024024 (PGSC0003DMG400024024) PGSC0003DMG400047093 (PGSC0003DMG400047093) PGSC0003DMG400044334 (PGSC0003DMG400044334) PGSC0003DMG400024016 (PGSC0003DMG400024016) PGSC0003DMG400036002 (PGSC0003DMG400036002) PGSC0003DMG400024018 (PGSC0003DMG400024018) PGSC0003DMG400041833 (PGSC0003DMG400041833) PGSC0003DMG400046898 (PGSC0003DMG400046898) PGSC0003DMG400036634 (PGSC0003DMG400036634) PGSC0003DMG400047150 (PGSC0003DMG400047150) PGSC0003DMG400034579 (PGSC0003DMG400034579) PGSC0003DMG400024025 (PGSC0003DMG400024025) PGSC0003DMG400046128 (PGSC0003DMG400046128) PGSC0003DMG400044566 (PGSC0003DMG400044566) PGSC0003DMG400036669 (PGSC0003DMG400036669) PGSC0003DMG400024026 (PGSC0003DMG400024026) PGSC0003DMG400024019 (PGSC0003DMG400024019) PGSC0003DMG400035125 (PGSC0003DMG400035125) PGSC0003DMG400024028 (PGSC0003DMG400024028) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:1 Solyc01g058720.2 Solyc01g058730.2 Solyc01g058740.2 Solyc01g059740.1 Solyc01g059750.1 Solyc01g059760.1 Solyc01g059780.1 Solyc01g059790.1 Solyc01g059800.1 Solyc01g059810.1 Solyc01g059820.1 Solyc01g059830.2 Solyc01g059840.1 Solyc01g059850.2 Solyc01g059860.2 Solyc01g059880.2 Solyc01g059890.1 Solyc01g059900.2 Solyc01g059910.2 Solyc01g059920.2 Solyc01g059930.2 Solyc01g059940.2 Solyc01g059950.1 Solyc01g059960.1 Solyc01g059970.1 Solyc01g059980.2 Solyc01g059990.2 Solyc01g060000.1 Solyc01g060010.1 Solyc01g060020.2 Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch05 PGSC0003DMG400027151 (PGSC0003DMG400027151) PGSC0003DMG400027152 (PGSC0003DMG400027152) PGSC0003DMG400027154 (PGSC0003DMG400027154) PGSC0003DMG400027155 (PGSC0003DMG400027155) PGSC0003DMG400027156 (PGSC0003DMG400027156) PGSC0003DMG400027205 (PGSC0003DMG400027205) PGSC0003DMG400027157 (PGSC0003DMG400027157) PGSC0003DMG400027206 (PGSC0003DMG400027206) PGSC0003DMG400027158 (PGSC0003DMG400027158) PGSC0003DMG400027207 (PGSC0003DMG400027207) PGSC0003DMG400027159 (PGSC0003DMG400027159) PGSC0003DMG400027208 (PGSC0003DMG400027208) PGSC0003DMG400027209 (PGSC0003DMG400027209) PGSC0003DMG402027210 (PGSC0003DMG402027210) PGSC0003DMG401027210 (PGSC0003DMG401027210) PGSC0003DMG400027212 (PGSC0003DMG400027212) PGSC0003DMG400027160 (PGSC0003DMG400027160) PGSC0003DMG400027213 (PGSC0003DMG400027213) PGSC0003DMG400027161 (PGSC0003DMG400027161) PGSC0003DMG400027162 (PGSC0003DMG400027162) PGSC0003DMG400027163 (PGSC0003DMG400027163) PGSC0003DMG402027214 (PGSC0003DMG402027214) PGSC0003DMG401027214 (PGSC0003DMG401027214) PGSC0003DMG400027215 (PGSC0003DMG400027215) PGSC0003DMG400027216 (PGSC0003DMG400027216) PGSC0003DMG400027164 (PGSC0003DMG400027164) PGSC0003DMG401027165 (PGSC0003DMG401027165) PGSC0003DMG400027217 (PGSC0003DMG400027217) PGSC0003DMG402027165 (PGSC0003DMG402027165) PGSC0003DMG401027166 (PGSC0003DMG401027166) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:5 Solyc05g053260.2 Solyc05g053270.1 Solyc05g053280.2 Solyc05g053290.2 Solyc05g053300.2 Solyc05g053310.2 Solyc05g053320.1 Solyc05g053330.2 SLGA2OX1 (Solyc05g053340.2) Solyc05g053350.2 Solyc05g053360.2 Solyc05g053370.2 Solyc05g053380.2 Solyc05g053390.2 Solyc05g053400.1 Solyc05g053420.1 Solyc05g053430.2 DDTFR19 (Solyc05g053440.2) Solyc05g053450.2 Solyc05g053460.1 Solyc05g053470.2 Solyc05g053480.2 Solyc05g053490.2 Solyc05g053500.2 Solyc05g053510.1 Solyc05g053520.2 Solyc05g053530.1 Solyc05g053540.2 CHS2 (Solyc05g053550.2) Solyc05g053560.2 Click to hide this line (commelinids) commelinids speciation node (click to collapse) commelinids Click to hide this line (Poaceae) Poaceae speciation node (click to collapse) Poaceae Click to hide this line (BEP clade) BEP clade speciation node (click to collapse) BEP clade Click to hide this line (Pooideae) Pooideae speciation node (click to collapse) Pooideae Click to hide this line (Hordeum vulgare subsp. vulgare) Hordeum vulgare subsp. vulgare terminal node Hordeum vulgare subsp. vulgare - Chr:morex_scaffold_1557904 Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:1 BRADI1G64210 BRADI1G64220 BRADI1G64230 BRADI1G64240 BRADI1G64250 BRADI1G64260 BRADI1G64267 BRADI1G64280 BRADI1G64290 BRADI1G64300 BRADI1G64310 BRADI1G64320 BRADI1G64327 BRADI1G64340 BRADI1G64350 BRADI1G64370 BRADI1G64380 BRADI1G64390 BRADI1G64400 BRADI1G64410 BRADI1G64420 BRADI1G64430 BRADI1G64440 BRADI1G64450 BRADI1G64460 BRADI1G64470 BRADI1G64480 BRADI1G64487 BRADI1G64500 BRADI1G64507 Click to hide this line (Oryza) Oryza speciation node (click to collapse) Oryza Click to hide this line (Oryza sativa) Oryza sativa speciation node (click to collapse) Oryza sativa Click to hide this line (Oryza sativa Indica Group) Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:3 OsI_11245 (BGIOSGA012468) OsI_11246 (BGIOSGA012469) OsI_11247 (BGIOSGA012470) OsI_11248 (BGIOSGA012471) OsI_11249 (BGIOSGA010882) OsI_11250 (BGIOSGA010881) OsI_11244 (BGIOSGA012472) OS03G0308000 (BGIOSGA012473) OsI_11253 (BGIOSGA010880) OsI_11254 (BGIOSGA010879) OsI_11255 (BGIOSGA012474) OsI_11256 (BGIOSGA012475) OS03G0308800 (BGIOSGA010878) OsI_11258 (BGIOSGA010877) OS03G0309000 (BGIOSGA010876) OsI_11261 (BGIOSGA012477) OS03G0309400 (BGIOSGA010875) OsI_11263 (BGIOSGA010874) OsI_11264 (BGIOSGA012478) OS03G0309800 (BGIOSGA012479) OsI_11266 (BGIOSGA010873) OsI_11267 (BGIOSGA012480) OS03G0310000 (BGIOSGA012481) OsI_11269 (BGIOSGA010872) OsI_11270 (BGIOSGA012482) OS03G0310400 (BGIOSGA012483) OS03G0310500 (BGIOSGA012484) OS03G0310600 (BGIOSGA010871) OS03G0310800 (BGIOSGA012485) OS03G0310900 (BGIOSGA010870) Click to hide this line (Oryza sativa Japonica Group) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:3 LOC_Os03g19436 LOC_Os03g19452 LOC_Os03g19462 LOC_Os03g19470 LOC_Os03g19480 LOC_Os03g19490 LOC_Os03g19500 LOC_Os03g19510 LOC_Os03g19520 LOC_Os03g19530 LOC_Os03g19540 LOC_Os03g19550 LOC_Os03g19560 LOC_Os03g19570 LOC_Os03g19580 LOC_Os03g19600 LOC_Os03g19610 LOC_Os03g19620 LOC_Os03g19630 LOC_Os03g19640 LOC_Os03g19650 LOC_Os03g19660 LOC_Os03g19670 LOC_Os03g19680 LOC_Os03g19690 LOC_Os03g19700 LOC_Os03g19709 LOC_Os03g19720 LOC_Os03g19740 LOC_Os03g19750 Click to hide this line (Oryza glaberrima) Oryza glaberrima terminal node Oryza glaberrima - Chr:3 ORGLA03G0141600 ORGLA03G0141700 ORGLA03G0141800 ORGLA03G0141900 ORGLA03G0142000 ORGLA03G0142100 ORGLA03G0142200 ORGLA03G0142300 ORGLA03G0142400 ORGLA03G0142500 ORGLA03G0142600 ORGLA03G0142700 ORGLA03G0142800 ORGLA03G0142900 ORGLA03G0143000 ORGLA03G0143200 ORGLA03G0143300 ORGLA03G0143400 ORGLA03G0143500 ORGLA03G0143600 ORGLA03G0143700 ORGLA03G0143800 ORGLA03G0143900 ORGLA03G0144000 ORGLA03G0144100 ORGLA03G0144200 ORGLA03G0144300 ORGLA03G0144400 ORGLA03G0144500 ORGLA03G0144600 Click to hide this line (Oryza brachyantha) Oryza brachyantha terminal node Oryza brachyantha - Chr:3 OB03G24590 OB03G24600 OB03G24610 OB03G24620 OB03G24630 OB03G24640 OB03G24650 OB03G24660 OB03G24670 OB03G24680 OB03G24690 OB03G24700 OB03G24710 OB03G24720 OB03G24730 OB03G24750 OB03G24760 OB03G24770 OB03G24780 OB03G24790 OB03G24800 OB03G24810 OB03G24820 OB03G24830 OB03G24840 OB03G24850 OB03G24860 OB03G24870 OB03G24880 OB03G24890 Click to hide this line (Panicoideae) Panicoideae speciation node (click to collapse) Panicoideae Click to show this node (Andropogoneae) Andropogoneae duplication node (click to collapse) Click to hide this line (Andropogoneae) Andropogoneae speciation node (click to collapse) Andropogoneae Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:1 SB01G037210 (Sb01g037210) SB01G037220 (Sb01g037220) SB01G037225 (Sb01g037225) SB01G037230 (Sb01g037230) SB01G037235 (Sb01g037235) SB01G037240 (Sb01g037240) SB01G037250 (Sb01g037250) SB01G037260 (Sb01g037260) SB01G037270 (Sb01g037270) SB01G037280 (Sb01g037280) SB01G037290 (Sb01g037290) SB01G037300 (Sb01g037300) SB01G037310 (Sb01g037310) SB01G037320 (Sb01g037320) SB01G037330 (Sb01g037330) SB01G037350 (Sb01g037350) SB01G037360 (Sb01g037360) SB01G037370 (Sb01g037370) SB01G037380 (Sb01g037380) SB01G037390 (Sb01g037390) SB01G037400 (Sb01g037400) SB01G037410 (Sb01g037410) SB01G037420 (Sb01g037420) SB01G037430 (Sb01g037430) Sb01g037440 SB01G037450 (Sb01g037450) SB01G037455 (Sb01g037455) SB01G037460 (Sb01g037460) SB01G037470 (Sb01g037470) Sb01g037480 Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:9 AC205709.3_FG004 GRMZM2G172099 GRMZM2G471629 GRMZM2G368350 AC205709.3_FG001 GRMZM2G153681 GRMZM2G473356 GRMZM2G174499 GRMZM2G586702 AC231485.1_FG005 GRMZM5G888502 GRMZM2G446528 GRMZM5G851029 GRMZM2G477908 GRMZM2G178053 GRMZM2G560322 GRMZM2G090869 GRMZM5G835858 GRMZM2G121456 GRMZM2G121303 EZ2 (GRMZM5G875502) AC233955.1_FG009 AC233955.1_FG008 GRMZM5G882519 GRMZM2G704488 AC233955.1_FG004 AC233955.1_FG003 AC233955.1_FG002 GRMZM2G080501 GRMZM2G080598 Click to show this node (Andropogoneae) Andropogoneae speciation node (click to collapse) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:1 GRMZM2G092442 GRMZM2G043439 EZ3 (GRMZM2G043484) GRMZM5G824629 GRMZM2G056373 GRMZM2G011483 GRMZM2G121871 GRMZM5G817117 GRMZM2G422295 GRMZM2G121957 GRMZM2G121960 AC225345.3_FG009 GRMZM2G013853 GRMZM2G013639 GRMZM2G069568 GRMZM5G895848 GRMZM2G394188 GRMZM2G394203 GRMZM2G394212 GRMZM2G394237 GRMZM2G033491 GRMZM2G135968 GRMZM2G438153 GRMZM2G389502 GRMZM2G089720 GRMZM2G364735 GRMZM5G878582 GRMZM2G329040 GRMZM2G703565 AC208571.4_FG003 Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - scaffold_9 Si037759m.g Si035985m.g Si039799m.g Si040747m.g Si034007m.g Si038516m.g Si039921m.g Si038387m.g Si037762m.g Si040288m.g Si039368m.g Si034305m.g Si040349m.g Si037035m.g Si038776m.g Si038524m.g Si039362m.g Si040668m.g Si036278m.g Si038593m.g Si037935m.g Si034695m.g Si036189m.g Si039919m.g Si034343m.g Si034078m.g Si036926m.g Si036751m.g Si034160m.g Si034564m.g Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:3 GSMUA_Achr3G08190_001 GSMUA_Achr3G08200_001 GSMUA_Achr3G08210_001 GSMUA_Achr3G08220_001 GSMUA_Achr3G08230_001 GSMUA_Achr3G08240_001 GSMUA_Achr3G08250_001 GSMUA_Achr3G08260_001 GSMUA_Achr3G08270_001 GSMUA_Achr3G08280_001 GSMUA_Achr3G08290_001 GSMUA_Achr3G08300_001 GSMUA_Achr3G08310_001 GSMUA_Achr3G08320_001 GSMUA_Achr3G08330_001 GSMUA_Achr3G08350_001 GSMUA_Achr3G08360_001 GSMUA_Achr3G08370_001 GSMUA_Achr3G08380_001 GSMUA_Achr3G08390_001 GSMUA_Achr3G08400_001 GSMUA_Achr3G08410_001 GSMUA_Achr3G08420_001 GSMUA_Achr3G08430_001 GSMUA_Achr3G08440_001 GSMUA_Achr3G08450_001 GSMUA_Achr3G08460_001 GSMUA_Achr3G08470_001 GSMUA_Achr3G08480_001 GSMUA_Achr3G08490_001 Click to show this node (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Click to hide this line (core eudicotyledons) core eudicotyledons speciation node (click to collapse) core eudicotyledons Click to hide this line (rosids) rosids speciation node (click to collapse) rosids Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis Click to hide this line (Arabidopsis lyrata subsp. lyrata) Arabidopsis lyrata subsp. lyrata terminal node Arabidopsis lyrata subsp. lyrata - Chr:7 XM_002867959.1 (fgenesh2_kg.7__2474__AT4G18250.1) XM_002867960.1 (fgenesh2_kg.7__2476__AT4G18230.1) XM_002870014.1 (scaffold_702611.1) XM_002870015.1 (fgenesh2_kg.7__2479__AT4G18210.1) XM_002870016.1 (Al_scaffold_0007_2365) XM_002870017.1 (Al_scaffold_0007_2366) XM_002870018.1 (Al_scaffold_0007_2367) XM_002870019.1 (fgenesh1_pm.C_scaffold_7001940) XM_002870020.1 (fgenesh2_kg.7__2483__AT4G18170.1) XM_002870021.1 (scaffold_702617.1) XM_002870022.1 (fgenesh1_pg.C_scaffold_7002104) XM_002870023.1 (Al_scaffold_0007_2373) XM_002867961.1 (fgenesh2_kg.7__2486__AT4G18140.1) XM_002870024.1 (Al_scaffold_0007_2375) XM_002867962.1 (fgenesh1_pg.C_scaffold_7002107) XM_002870025.1 (fgenesh2_kg.7__2489__AT4G18120.1) XM_002867964.1 (scaffold_702624.1) XM_002867965.1 (fgenesh2_kg.7__2491__AT4G18100.1) XM_002867966.1 (fgenesh1_pm.C_scaffold_7001949) XM_002870026.1 (Al_scaffold_0007_2381) XM_002867967.1 (scaffold_702628.1) XM_002870027.1 (fgenesh2_kg.7__2498__AT4G18050.1) XM_002870028.1 (Al_scaffold_0007_2384) XM_002867968.1 (fgenesh2_kg.7__2499__AT4G18040.1) XM_002867969.1 (Al_scaffold_0007_2386) XM_002867970.1 (fgenesh2_kg.7__2500__AT4G18030.1) XM_002867971.1 (fgenesh2_kg.7__2503__AT4G18020.2) XM_002867972.1 (scaffold_702635.1) XM_002867973.1 (scaffold_702636.1) XM_002867974.1 (fgenesh1_pg.C_scaffold_7002122) Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:4 AT4G17990 (AT4G17990) AT4G17998 (AT4G17998) AT4G18000 (AT4G18000) IP5PII (AT4G18010) APRR2 (AT4G18020) AT4G18030 (AT4G18030) EIF4E (AT4G18040) PGP9 (AT4G18050) AT4G18060 (AT4G18060) AT4G18070 (AT4G18070) AT4G18080 (AT4G18080) AT4G18090 (AT4G18090) AT4G18100 (AT4G18100) AT4G18110 (AT4G18110) ML3 (AT4G18120) SSP4b (AT4G18140) AT4G18150 (AT4G18150) ATTPK3 (AT4G18160) WRKY28 (AT4G18170) AT4G18180 (AT4G18180) ATPUP6 (AT4G18190) ATPUP8 (AT4G18195) ATPUP7 (AT4G18197) AT4G18205 (AT4G18205) ATPUP10 (AT4G18210) AT4G18220 (AT4G18220) AT4G18230 (AT4G18230) SSIV (AT4G18240) AT4G18250 (AT4G18250) AT4G18260 (AT4G18260) Click to hide this line (Brassica rapa subsp. pekinensis) Brassica rapa subsp. pekinensis terminal node Brassica rapa subsp. pekinensis - Chr:A01 Bra013271 (Bra013271) Bra013272 (Bra013272) Bra013273 (Bra013273) Bra013274 (Bra013274) Bra013275 (Bra013275) Bra013276 (Bra013276) Bra013277 (Bra013277) Bra013279 (Bra013279) Bra013278 (Bra013278) Bra013280 (Bra013280) Bra013281 (Bra013281) Bra013282 (Bra013282) Bra013283 (Bra013283) Bra013284 (Bra013284) Bra013285 (Bra013285) Bra013287 (Bra013287) Bra013288 (Bra013288) Bra013289 (Bra013289) Bra013290 (Bra013290) Bra013291 (Bra013291) Bra013292 (Bra013292) Bra013293 (Bra013293) Bra013294 (Bra013294) Bra013295 (Bra013295) Bra013296 (Bra013296) Bra013297 (Bra013297) Bra013298 (Bra013298) Bra013299 (Bra013299) Bra013300 (Bra013300) Bra013301 (Bra013301) Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:10 Vv10s0003g02510 Vv10s0003g02520 Vv10s0003g02530 Vv10s0003g02540 Vv10s0003g02550 Vv10s0003g02560 Vv10s0003g02570 Vv10s0003g02580 Vv10s0003g02590 Vv10s0003g02610 Vv10s0003g02620 Vv10s0003g02630 Vv10s0003g02650 Vv10s0003g02660 Vv10s0003g02670 Vv10s0003g02690 Vv10s0003g02700 Vv10s0003g02710 Vv10s0003g02730 Vv10s0003g02740 Vv10s0003g02750 Vv10s0003g02760 Vv10s0003g02770 Vv10s0003g02780 Vv10s0003g02790 Vv10s0003g02800 Vv10s0003g02810 Vv10s0003g02820 Vv10s0003g02830 Click to show this node (fabids) fabids speciation node (click to collapse) Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm09 GLYMA09G10860 GLYMA09G10985 GLYMA09G11111 GLYMA09G11235 GLYMA09G11360 GLYMA09G11411 GLYMA09G11460 GLYMA09G11471 GLYMA09G11480 GLYMA09G11510 GLYMA09G11500 GLYMA09G11531 GLYMA09G11551 GLYMA09G11585 GLYMA09G11570 GLYMA09G11615 GLYMA09G11630 GLYMA09G11650 GLYMA09G11663 GLYMA09G11690 GLYMA09G11705 GLYMA09G11720 GLYMA09G11730 GLYMA09G11740 GLYMA09G11770 GLYMA09G11820 GLYMA09G11825 GLYMA09G11831 GLYMA09G11835 Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm15 GLYMA15G23191 GLYMA15G23200 GLYMA15G23205 GLYMA15G23211 GLYMA15G23215 GMA.58124 (GLYMA15G23220) GMA.13204 (GLYMA15G23230) GMA.16450 (GLYMA15G23240) GLYMA15G23250 GLYMA15G23260 GLYMA15G23270 GLYMA15G23310 GLYMA15G23335 GLYMA15G23360 GLYMA15G23380 GLYMA15G23411 GLYMA15G23420 GLYMA15G23450 GLYMA15G23470 GLYMA15G23480 GLYMA15G23500 GLYMA15G23520 GLYMA15G23535 GLYMA15G23550 GLYMA15G23560 GLYMA15G23566 GLYMA15G23573 GLYMA15G23580 GLYMA15G23595 Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch02 PGSC0003DMG400009704 (PGSC0003DMG400009704) PGSC0003DMG401009709 (PGSC0003DMG401009709) PGSC0003DMG402009709 (PGSC0003DMG402009709) PGSC0003DMG400009703 (PGSC0003DMG400009703) PGSC0003DMG400009702 (PGSC0003DMG400009702) PGSC0003DMG400003081 (PGSC0003DMG400003081) PGSC0003DMG400003067 (PGSC0003DMG400003067) PGSC0003DMG400003068 (PGSC0003DMG400003068) PGSC0003DMG400003082 (PGSC0003DMG400003082) PGSC0003DMG400003069 (PGSC0003DMG400003069) PGSC0003DMG400003070 (PGSC0003DMG400003070) PGSC0003DMG400003083 (PGSC0003DMG400003083) PGSC0003DMG400003084 (PGSC0003DMG400003084) PGSC0003DMG400003071 (PGSC0003DMG400003071) PGSC0003DMG400003085 (PGSC0003DMG400003085) PGSC0003DMG400003086 (PGSC0003DMG400003086) PGSC0003DMG400003073 (PGSC0003DMG400003073) PGSC0003DMG400036974 (PGSC0003DMG400036974) PGSC0003DMG400003074 (PGSC0003DMG400003074) PGSC0003DMG400003087 (PGSC0003DMG400003087) PGSC0003DMG400003075 (PGSC0003DMG400003075) PGSC0003DMG400003088 (PGSC0003DMG400003088) PGSC0003DMG400003076 (PGSC0003DMG400003076) PGSC0003DMG400003077 (PGSC0003DMG400003077) PGSC0003DMG400003078 (PGSC0003DMG400003078) PGSC0003DMG400003089 (PGSC0003DMG400003089) PGSC0003DMG400003099 (PGSC0003DMG400003099) PGSC0003DMG400003100 (PGSC0003DMG400003100) PGSC0003DMG400003090 (PGSC0003DMG400003090) PGSC0003DMG400003091 (PGSC0003DMG400003091) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:2 Solyc02g071110.2 Solyc02g071120.2 Solyc02g071130.2 Solyc02g071140.2 Solyc02g071150.2 Solyc02g071160.2 Solyc02g071170.2 Solyc02g071180.2 Solyc02g071190.2 Solyc02g071210.2 Solyc02g071220.2 Solyc02g071230.1 Solyc02g071240.2 Solyc02g071250.2 Solyc02g071270.1 Solyc02g071280.2 Solyc02g071290.1 Solyc02g071300.1 Solyc02g071310.2 Solyc02g071320.2 Solyc02g071330.2 Solyc02g071340.1 Solyc02g071350.2 Solyc02g071360.2 Solyc02g071370.1 Solyc02g071380.2 Solyc02g071390.1 Solyc02g071400.2 Solyc02g071410.2 Click to show this node (Selaginella moellendorffii) Selaginella moellendorffii duplication node (click to collapse) Click to hide this line (Selaginella moellendorffii) Selaginella moellendorffii terminal node Selaginella moellendorffii - Chr:GL377687 SELMODRAFT_429927 (SELMODRAFT_429927) SELMODRAFT_429928 (SELMODRAFT_429928) SELMODRAFT_429929 (SELMODRAFT_429929) SELMODRAFT_134000 (SELMODRAFT_134000) SELMODRAFT_49860 (SELMODRAFT_49860) SELMODRAFT_23175 (SELMODRAFT_23175) SELMODRAFT_134021 (SELMODRAFT_134021) SELMODRAFT_272222 (SELMODRAFT_272222) SELMODRAFT_26026 (SELMODRAFT_26026) SELMODRAFT_133997 (SELMODRAFT_133997) SELMODRAFT_134017 (SELMODRAFT_134017) SELMODRAFT_134035 (SELMODRAFT_134035) SELMODRAFT_229638 (SELMODRAFT_229638) GSK2-2 (SELMODRAFT_186226) SELMODRAFT_186230 (SELMODRAFT_186230) SELMODRAFT_186234 (SELMODRAFT_186234) SELMODRAFT_24753 (SELMODRAFT_24753) SELMODRAFT_236348 (SELMODRAFT_236348) SELMODRAFT_272226 (SELMODRAFT_272226) Click to hide this line (Selaginella moellendorffii) Selaginella moellendorffii terminal node Selaginella moellendorffii - Chr:GL377679 SELMODRAFT_429447 (SELMODRAFT_429447) SELMODRAFT_229587 (SELMODRAFT_229587) SELMODRAFT_132865 (SELMODRAFT_132865) GSK2-1 (SELMODRAFT_451471) SELMODRAFT_269750 (SELMODRAFT_269750) SELMODRAFT_132845 (SELMODRAFT_132845) SELMODRAFT_132792 (SELMODRAFT_132792) SELMODRAFT_448296 (SELMODRAFT_448296) SELMODRAFT_161424 (SELMODRAFT_161424) SELMODRAFT_132850 (SELMODRAFT_132850) SELMODRAFT_269753 (SELMODRAFT_269753) SELMODRAFT_272183 (SELMODRAFT_272183) SELMODRAFT_132827 (SELMODRAFT_132827) SELMODRAFT_23173 (SELMODRAFT_23173) SELMODRAFT_49859 (SELMODRAFT_49859) SELMODRAFT_132799 (SELMODRAFT_132799) SELMODRAFT_429457 (SELMODRAFT_429457) SELMODRAFT_429458 (SELMODRAFT_429458) SELMODRAFT_429459 (SELMODRAFT_429459) SELMODRAFT_429460 (SELMODRAFT_429460) SELMODRAFT_429461 (SELMODRAFT_429461) SELMODRAFT_429462 (SELMODRAFT_429462) SELMODRAFT_429463 (SELMODRAFT_429463) SELMODRAFT_429464 (SELMODRAFT_429464) SELMODRAFT_429465 (SELMODRAFT_429465) SELMODRAFT_132773 (SELMODRAFT_132773) AT1G09590 (AT1G09590) XM_002892471.1 (scaffold_101008.1) AT1G09680 (AT1G09680) XM_002892470.1 (scaffold_101007.1) Bra020001 (Bra020001) Solyc07g047620.1 EPlGT00140000001372 EPlGT00140000001372.a.a.b EPlGT00140000001372.a.a.b EPlGT00140000001372.a.a.b EPlGT00140000001372.a.a.b EPlGT00140000001372.a.a.b PHYA (AT1G09570) XM_002892464.1 (fgenesh2_kg.1__1007__AT1G09570.1) Bra020013 (Bra020013) Bra031672 (Bra031672) EPlGT00140000001372.a.a.b PHYA (GLYMA20G22160) PHYA (GLYMA10G28170) GLYMA19G41210 GLYMA03G38620 PHYA (POPTR_0013s00220) PHYA (Vv14s0060g00100) EPlGT00140000001372.a.a.b PHYA (Solyc10g044670.1) PHYA (PGSC0003DMG400015766) EPlGT00140000001372.a.a.b EPlGT00140000001372.a.a.b.a EPlGT00140000001372.a.a.b.a.a BRADI1G10510 BRADI1G10520 PHYA (MLOC_81684) BRADI1G10510 BRADI1G10520 GRMZM2G387155 EPlGT00140000001372.a.a.b.b EPlGT00140000001372.a.a.b.b EPlGT00140000001372.a.a.b.b OsI_13315 (BGIOSGA009906) PHYA (LOC_Os03g51030) ORGLA03G0410100 OB03G39220 EPlGT00140000001372.a.a.b.b.a EPlGT00140000001372.a.a.b.b.a PHYA1 (GRMZM2G181028) GRMZM2G111939 phyA1 (GRMZM2G157727) PHYA (Sb01g009920) SB01G009930 (Sb01g009930) PHYA (Sb01g009920) SB01G009930 (Sb01g009930) Si033984m.g EPlGT00140000001372.a.a.b.b.b SB0919S002010 (Sb0919s002010) Si027327m.g GSMUA_Achr8G06130_001 SELMODRAFT_161807 (SELMODRAFT_161807) PHYB (SELMODRAFT_161430) EPlGT00140000001372.a.a.a EPlGT00140000001372.a.a.a GRMZM2G345509 GSMUA_Achr5G27310_001 Bra001650 (Bra001650) EPlGT00140000001372.a.b EPlGT00140000001372.a.b GSMUA_Achr4G32930_001 GSMUA_Achr4G32940_001 GSMUA_Achr4G32930_001 GSMUA_Achr4G32940_001 GSMUA_Achr6G00080_001 EPlGT00140000001372.a.b EPlGT00140000001372.a.b EPlGT00140000001372.a.b BRADI1G08400 PHYC (MLOC_824) EPlGT00140000001372.a.b EPlGT00140000001372.a.b LOC_Os03g54084 BGIOSGA013571 ORGLA03G0314300 OB03G41420 EPlGT00140000001372.a.b EPlGT00140000001372.a.b GRMZM2G105312 GRMZM2G171949 phyC2 (GRMZM2G129889) GRMZM2G027493 phyC1 (GRMZM2G057935) PHYC (Sb01g007850) Si034030m.g EPlGT00140000001372.a.b.e EPlGT00140000001372.a.b.e PGSC0003DMG400017396 (PGSC0003DMG400017396) PHYF (Solyc07g045480.2) PHYC (Vv12s0057g00980) EPlGT00140000001372.a.b.f EPlGT00140000001372.a.b.f PHYC (fgenesh2_kg.7__3070__AT5G35840.1) PHYC (AT5G35840) Bra039485 (Bra039485) EPlGT00140000001372.b.a EPlGT00140000001372.b.a.a PHYB (GLYMA09G03990) PHYB (GLYMA15G14980) GLYMA07G11790 EPlGT00140000001372.b.a.a.c EPlGT00140000001372.b.a.a.c PHYB (fgenesh2_kg.3__3552__AT2G18790.1) PHYB (AT2G18790) Bra022192 (Bra022192) EPlGT00140000001372.b.a.a.d PHYD (scaffold_702875.1) PHYD (AT4G16250) EPlGT00140000001372.b.a.b EPlGT00140000001372.b.a.b PHYB1 (POPTR_0008s10470) PHYB2 (POPTR_0010s15600) PHYB (Vv05s0077g00940) EPlGT00140000001372.b.a.b.c PHYB (PGSC0003DMG400024017) PHYB1 (Solyc01g059870.2) EPlGT00140000001372.b.a.b.d POTPHYB2 (PGSC0003DMG400027211) PHYB2 (Solyc05g053410.2) EPlGT00140000001372.b.a EPlGT00140000001372.b.a EPlGT00140000001372.b.a EPlGT00140000001372.b.a PHYB (MLOC_9834) BRADI1G64360 EPlGT00140000001372.b.a EPlGT00140000001372.b.a OsI_11260 (BGIOSGA012476) LOC_Os03g19590 ORGLA03G0143100 OB03G24740 EPlGT00140000001372.b.a EPlGT00140000001372.b.a.c PHYB (Sb01g037340) phyB2 (GRMZM2G092174) GRMZM2G124532 Si033968m.g GSMUA_Achr3G08340_001 EPlGT00140000001372.b.b EPlGT00140000001372.b.b EPlGT00140000001372.b.b EPlGT00140000001372.b.b XM_002867963.1 (scaffold_702622.1) PHYE (AT4G18130) Bra013286 (Bra013286) PHYE (Vv10s0003g02680) GLYMA09G11600 GLYMA15G23400 EPlGT00140000001372.b.b PGSC0003DMG400003072 (PGSC0003DMG400003072) PHYE (Solyc02g071260.2) POC1 (AT1G09530) XM_002889710.1 (fgenesh2_kg.1__1002__AT1G09530.2) Bra020017 (Bra020017) Bra031668 (Bra031668) GLYMA20G22291 GLYMA10G28290 POPTRDRAFT_662518 (POPTR_0013s00310) Vv14s0060g00260 GLYMA19G41261 GLYMA03G38675 AT1G09490 (AT1G09490) XM_002889707.1 (fgenesh2_kg.1__996__AT1G09490.1) Bra020021 (Bra020021) Bra020020 (Bra020020) Bra020019 (Bra020019) AT1G09450 (AT1G09450) XM_002889704.1 (fgenesh1_pm.C_scaffold_1000768) GLYMA03G38780 AT1G09483 (AT1G09483) XM_002892461.1 (fgenesh2_kg.1__994__AT1G09470.1) Bra020022 (Bra020022) AT1G09660 (AT1G09660) XM_002892469.1 (fgenesh2_kg.1__1021__AT1G09660.1) Bra020003 (Bra020003) AT1G09610 (AT1G09610) XM_002889715.1 (scaffold_100999.1) AT1G09690 (AT1G09690) XM_002889714.1 (fgenesh2_kg.1__1011__AT1G09590.1) Bra020009 (Bra020009) Bra020000 (Bra020000) Bra031682 (Bra031682) Bra031673 (Bra031673) RAB-A2A (AT1G09630) XM_002892468.1 (scaffold_101002.1) Bra020006 (Bra020006) AT1G09470 (AT1G09470) AT1G09650 (AT1G09650) XM_002889718.1 (fgenesh2_kg.1__1019__AT1G09650.1) AT1G09600 (AT1G09600) Bra020008 (Bra020008) Bra031674 (Bra031674) GRMZM2G418223 AT1G09520 (AT1G09520) XM_002892462.1 (fgenesh2_kg.1__1001__AT1G09520.1) Bra020018 (Bra020018) Bra031667 (Bra031667) AT1G09500 (AT1G09500) XM_002889708.1 (fgenesh2_kg.1__999__AT1G09500.1) AT1G09665 (AT1G09665) XM_002889719.1 (Al_scaffold_0001_930) Bra020002 (Bra020002) AT1G09510 (AT1G09510) XM_002889709.1 (fgenesh2_kg.1__1000__AT1G09510.1) XM_002889706.1 (scaffold_100985.1) Bra031666 (Bra031666) AT1G09620 (AT1G09620) XM_002892466.1 (fgenesh2_kg.1__1014__AT1G09620.1) Bra020007 (Bra020007) Bra031675 (Bra031675) AT1G09645 (AT1G09645) XM_002889717.1 (scaffold_101004.1) Bra020004 (Bra020004) AT1G09580 (AT1G09580) XM_002889713.1 (fgenesh2_kg.1__1010__AT1G09580.1) Bra020010 (Bra020010) Bra031678 (Bra031678) AT1G09640 (AT1G09640) XM_002889716.1 (fgenesh2_kg.1__1017__AT1G09640.1) Bra020005 (Bra020005) Bra031676 (Bra031676) AT1G09480 (AT1G09480) AT1G09625 (AT1G09625) XM_002892467.1 (scaffold_101001.1) AT1G09575 (AT1G09575) XM_002892465.1 (Al_scaffold_0001_918) Bra020011 (Bra020011) AT1G09440 (AT1G09440) XM_002892460.1 (fgenesh1_pm.C_scaffold_1000767) Bra020024 (Bra020024) Bra031665 (Bra031665) AT1G09550 (AT1G09550) XM_002892463.1 (fgenesh1_pm.C_scaffold_1000777) GLYMA20G22210 GLYMA10G28230 GLYMA19G41240 GLYMA03G38650 POPTRDRAFT_240173 (POPTR_0013s00280) Vv14s0060g00230 Bra020015 (Bra020015) AT1G09460 (AT1G09460) XM_002889705.1 (Al_scaffold_0001_908) Bra020023 (Bra020023) GLYMA03G38770 GSMUA_Achr4G32790_001 GSMUA_Achr4G32790_001 GSMUA_Achr6G00220_001 OB03G41370 Si039775m.g XM_002870398.1 (scaffold_703445.1) AT5G35740 (AT5G35740) Vv10s0003g02720 GLYMA09G11676 GLYMA15G23435 Solyc02g071200.2 ACLA-3 (AT1G09430) XM_002889703.1 (fgenesh2_kg.1__990__AT1G09430.1) GSMUA_Achr8G06210_001 PGSC0003DMG400029179 (PGSC0003DMG400029179) GLP5 (AT1G09560) XM_002889712.1 (Al_scaffold_0001_916) Bra020014 (Bra020014) Bra031671 (Bra031671) GLYMA20G22180 GMA.4401 (GLYMA10G28020) GLYMA10G28190 GLYMA19G41070 GLYMA19G41220 GMA.2470 (GLYMA03G38630) POPTRDRAFT_834434 (POPTR_0013s00240) Vv14s0060g00120 MYB61 (AT1G09540) XM_002889711.1 (scaffold_100991.1) Bra031669 (Bra031669) Bra020016 (Bra020016) MYB89 (GLYMA20G22230) GLYMA10G28250 GLYMA19G41250 MYB160 (GLYMA03G38660) MYB216 (POPTR_0013s00290) Vv14s0060g00240 Solyc10g044680.1 PGSC0003DMG400015767 (PGSC0003DMG400015767)