Reference Gene Name: GRMZM2G028033 EnsemblPlants
Reference Species : Zea mays
Root Species : Eukaryota 		Eukaryota Link Wikipedia to Zea mays Link Ensembl
×2 ÷2 Center the view on the reference gene Shift 1 gene on the left Shift 5 genes on the left Shift 1 gene on the right Shift 5 genes on the right Zoom out Show 1 less gene on each side Show 1 more gene on each side Show half the number of genes on each side Show twice more genes on each side Zoom in

A more recent version of genomicus is available here

 
Eukaryota speciation node (click to collapse) Eukaryota Click to show this node (Viridiplantae) Viridiplantae speciation node (click to collapse) Click to hide this line (Embryophyta) Embryophyta speciation node (click to collapse) Embryophyta Click to show this node (Tracheophyta) Tracheophyta speciation node (click to collapse) Click to show this node (Magnoliophyta) Magnoliophyta duplication node (click to collapse) Click to show this node (Magnoliophyta) Magnoliophyta duplication node (click to collapse) Click to hide this line (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Magnoliophyta Click to hide this line (commelinids) commelinids speciation node (click to collapse) commelinids Click to show this node (Poaceae) Poaceae duplication node (click to collapse) Click to hide this line (Poaceae) Poaceae speciation node (click to collapse) Poaceae Click to hide this line (Panicoideae) Panicoideae speciation node (click to collapse) Panicoideae Click to hide this line (Andropogoneae) Andropogoneae speciation node (click to collapse) Andropogoneae Click to show this node (Zea mays) Zea mays duplication node (click to collapse) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:1 Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:9 GRMZM2G071055 GRMZM5G803886 AC216199.3_FG001 GRMZM2G094828 AC204402.3_FG002 GRMZM2G363649 GRMZM2G428539 GRMZM2G128537 GRMZM2G428579 GRMZM2G128590 GRMZM2G048695 GRMZM5G815773 GRMZM2G439983 GRMZM5G804470 GRMZM2G440533 GRMZM2G029434 GRMZM2G114033 GRMZM2G114031 GRMZM2G113940 GRMZM2G113873 GRMZM2G329869 GRMZM2G345512 AC197901.3_FG002 AC197901.3_FG003 Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:1 SB01G029900 (Sb01g029900) SB01G029910 (Sb01g029910) SB01G029940 (Sb01g029940) SB01G029965 (Sb01g029965) SB01G029970 (Sb01g029970) SB01G029990 (Sb01g029990) SB01G030000 (Sb01g030000) SB01G030005 (Sb01g030005) SB01G030030 (Sb01g030030) SB01G030035 (Sb01g030035) SB01G030075 (Sb01g030075) SB01G030080 (Sb01g030080) SB01G030083 (Sb01g030083) SB01G030086 (Sb01g030086) SB01G030100 (Sb01g030100) SB01G030120 (Sb01g030120) SB01G030130 (Sb01g030130) Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - scaffold_9 Si038723m.g Si038558m.g Si040123m.g Si039153m.g Si037142m.g Si038346m.g Si039568m.g Si035362m.g Si037494m.g Si040476m.g Si039573m.g Si034061m.g Si038833m.g Si040767m.g Si040820m.g Si038008m.g Si040359m.g Si034890m.g Si039448m.g Click to hide this line (BEP clade) BEP clade speciation node (click to collapse) BEP clade Click to show this node (Pooideae) Pooideae duplication node (click to collapse) Click to hide this line (Pooideae) Pooideae speciation node (click to collapse) Pooideae Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:3 BRADI3G32567 BRADI3G32580 BRADI3G32590 BRADI3G32595 BRADI3G32600 BRADI3G32610 BRADI3G32630 BRADI3G32640 BRADI3G32650 BRADI3G32680 BRADI3G32720 BRADI3G32730 BRADI3G32740 BRADI3G32750 BRADI3G32820 BRADI3G32830 BRADI3G32840 BRADI3G32850 BRADI3G32860 Click to hide this line (Hordeum vulgare subsp. vulgare) Hordeum vulgare subsp. vulgare terminal node Hordeum vulgare subsp. vulgare - Chr:morex_scaffold_1562875 Click to show this node (Pooideae) Pooideae speciation node (click to collapse) Click to hide this line (Hordeum vulgare subsp. vulgare) Hordeum vulgare subsp. vulgare terminal node Hordeum vulgare subsp. vulgare - Chr:morex_scaffold_38289 Click to hide this line (Oryza) Oryza speciation node (click to collapse) Oryza Click to hide this line (Oryza sativa) Oryza sativa speciation node (click to collapse) Oryza sativa Click to hide this line (Oryza sativa Indica Group) Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:10 OSJNBA0001O14.4 (BGIOSGA031472) OS10G0545400 (BGIOSGA033396) OsI_34535 (BGIOSGA031471) OSJNBA0001O14.6 (BGIOSGA033398) OsI_34540 (BGIOSGA031470) OsI_34542 (BGIOSGA031469) OSJNBA0001O14.15 (BGIOSGA033402) OS10G0547200 (BGIOSGA031466) OSJNBA0001O14.19 (BGIOSGA033406) OS10G0548400 (BGIOSGA033407) OSJNBA0082M15.3 (BGIOSGA031458) BGIOSGA031456 OsI_34563 (BGIOSGA033409) Click to hide this line (Oryza sativa Japonica Group) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:10 LOC_Os10g39830 LOC_Os10g39850 LOC_Os10g39860 LOC_Os10g39880 LOC_Os10g39900 LOC_Os10g39932 LOC_Os10g39934 LOC_Os10g39940 LOC_Os10g39970 LOC_Os10g39980 LOC_Os10g39990 LOC_Os10g40010 LOC_Os10g40070 LOC_Os10g40080 LOC_Os10g40110 Click to hide this line (Oryza glaberrima) Oryza glaberrima terminal node Oryza glaberrima - Chr:10 ORGLA10G0125500 ORGLA10G0125600 ORGLA10G0125800 ORGLA10G0125900 ORGLA10G0126000 ORGLA10G0126200 ORGLA10G0126600 ORGLA10G0126800 ORGLA10G0127000 ORGLA10G0127100 ORGLA10G0127200 ORGLA10G0127400 ORGLA10G0128000 ORGLA10G0128300 Click to hide this line (Oryza brachyantha) Oryza brachyantha terminal node Oryza brachyantha - Chr:10 OB10G24590 OB10G24600 OB10G24610 OB10G24620 OB10G24640 OB10G24650 OB10G24680 OB10G24720 OB10G24730 OB10G24750 OB10G24760 OB10G24780 OB10G24800 OB10G24810 OB10G24820 OB10G24850 OB10G24860 OB10G24870 OB10G24880 OB10G24890 Click to hide this line (Poaceae) Poaceae speciation node (click to collapse) Poaceae Click to hide this line (BEP clade) BEP clade speciation node (click to collapse) BEP clade Click to hide this line (Pooideae) Pooideae speciation node (click to collapse) Pooideae Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:1 BRADI1G77957 BRADI1G77970 BRADI1G77980 BRADI1G77997 BRADI1G78010 BRADI1G78015 BRADI1G78020 BRADI1G78027 BRADI1G78040 BRADI1G78057 BRADI1G78070 psbD (BRADI1G78076) psbC (BRADI1G78082) BRADI1G78100 BRADI1G78110 BRADI1G78130 BRADI1G78140 BRADI1G78150 BRADI1G78160 BRADI1G78165 BRADI1G78170 BRADI1G78180 BRADI1G78190 BRADI1G78200 BRADI1G78210 BRADI1G78220 BRADI1G78230 Click to hide this line (Hordeum vulgare subsp. vulgare) Hordeum vulgare subsp. vulgare terminal node Hordeum vulgare subsp. vulgare - Chr:morex_scaffold_43083 MLOC_58889 MLOC_58890 Click to hide this line (Oryza) Oryza speciation node (click to collapse) Oryza Click to hide this line (Oryza sativa) Oryza sativa speciation node (click to collapse) Oryza sativa Click to hide this line (Oryza sativa Indica Group) Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:3 OSJNBA0009C08.11 (BGIOSGA011615) OsI_09645 (BGIOSGA011668) OSJNBA0009C08.12 (BGIOSGA011614) OS03G0106200 (BGIOSGA011613) OsI_09648 (BGIOSGA011612) OSJNBA0009C08.14 (BGIOSGA011611) OSJNBA0009C08.16 (BGIOSGA011670) OsI_09655 (BGIOSGA011607) OS03G0107000 (BGIOSGA011606) OsI_09657 (BGIOSGA011671) LSI2 (BGIOSGA011605) OS03G0107500 (BGIOSGA011673) OJ1384D03.4 (BGIOSGA011674) OsI_09663 (BGIOSGA011604) OsI_09664 (BGIOSGA011676) OS03G0107800 (BGIOSGA011603) OS03G0107900 (BGIOSGA011678) CDC25.2 (BGIOSGA011602) OsI_09669 (BGIOSGA011679) OJ1384D03.9 (BGIOSGA011680) OS03G0108400 (BGIOSGA011681) OS03G0108500 (BGIOSGA011600) OsI_09674 (BGIOSGA011682) Click to hide this line (Oryza sativa Japonica Group) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:3 LOC_Os03g01560 LOC_Os03g01570 LOC_Os03g01580 PAIR1 (LOC_Os03g01590) LOC_Os03g01600 LOC_Os03g01614 LOC_Os03g01620 LOC_Os03g01660 LOC_Os03g01670 LOC_Os03g01684 LOC_Os03g01700 LOC_Os03g01720 LOC_Os03g01730 LOC_Os03g01750 LOC_Os03g01760 LOC_Os03g01770 LOC_Os03g01780 LOC_Os03g01790 LOC_Os03g01810 LOC_Os03g01820 LOC_Os03g01830 LOC_Os03g01840 LOC_Os03g01850 LOC_Os03g01860 Click to hide this line (Oryza glaberrima) Oryza glaberrima terminal node Oryza glaberrima - Chr:3 ORGLA03G0002100 ORGLA03G0002200 ORGLA03G0002300 ORGLA03G0002400 ORGLA03G0002500 ORGLA03G0002600 ORGLA03G0002700 ORGLA03G0002800 ORGLA03G0003100 ORGLA03G0003300 ORGLA03G0003400 ORGLA03G0003500 ORGLA03G0003700 ORGLA03G0003800 ORGLA03G0004000 ORGLA03G0004100 ORGLA03G0004200 ORGLA03G0004300 ORGLA03G0004500 ORGLA03G0004600 ORGLA03G0004700 ORGLA03G0004800 ORGLA03G0004900 ORGLA03G0005000 ORGLA03G0005100 Click to hide this line (Oryza brachyantha) Oryza brachyantha terminal node Oryza brachyantha - Chr:3 OB03G10400 OB03G10410 OB03G10420 OB03G10430 OB03G10440 OB03G10450 OB03G10460 OB03G10470 OB03G10480 OB03G10510 OB03G10520 OB03G10530 OB03G10540 OB03G10560 OB03G10570 OB03G10580 OB03G10600 OB03G10610 OB03G10620 OB03G10630 OB03G10640 OB03G10650 OB03G10670 OB03G10680 OB03G10690 OB03G10710 Click to hide this line (Panicoideae) Panicoideae speciation node (click to collapse) Panicoideae Click to show this node (Andropogoneae) Andropogoneae duplication node (click to collapse) Click to hide this line (Andropogoneae) Andropogoneae speciation node (click to collapse) Andropogoneae Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:1 SB01G050030 (Sb01g050030) SB01G050040 (Sb01g050040) SB01G050050 (Sb01g050050) SB01G050060 (Sb01g050060) SB01G050080 (Sb01g050080) SB01G050085 (Sb01g050085) SB01G050090 (Sb01g050090) SB01G050092 (Sb01g050092) SB01G050095 (Sb01g050095) SB01G050097 (Sb01g050097) SB01G050100 (Sb01g050100) SB01G050110 (Sb01g050110) Sb01g050120 SB01G050150 (Sb01g050150) SB01G050160 (Sb01g050160) SB01G050163 (Sb01g050163) SB01G050166 (Sb01g050166) SB01G050170 (Sb01g050170) Sb01g050250 SB01G050260 (Sb01g050260) SB01G050270 (Sb01g050270) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:9 GRMZM2G393334 GRMZM2G092497 GRMZM2G092456 GRMZM2G436703 GRMZM2G037327 GRMZM2G037193 GRMZM5G831393 GRMZM2G148057 GRMZM2G449359 GRMZM2G110258 GRMZM2G110236 GRMZM2G110116 GRMZM2G109987 GRMZM5G847608 GRMZM2G165939 GRMZM2G413334 GRMZM5G871180 GRMZM2G413362 GRMZM2G113245 GRMZM2G113267 GRMZM2G171089 AC190533.4_FG006 GRMZM2G055785 GRMZM2G055862 GRMZM2G354746 GRMZM2G055899 GRMZM2G354851 GRMZM2G515450 GRMZM5G860824 Click to show this node (Andropogoneae) Andropogoneae speciation node (click to collapse) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:1 TUBB1 (GRMZM2G164696) GRMZM5G831937 GRMZM2G703466 AC195844.2_FG003 GRMZM2G114469 GRMZM2G114459 GRMZM2G458423 GRMZM5G820530 GRMZM2G109725 GRMZM2G411063 GRMZM2G410990 ZmLsi2 (GRMZM2G158378) AC196173.3_FG001 GRMZM2G137296 GRMZM2G459354 GRMZM2G028870 GRMZM2G052546 GRMZM2G120584 GRMZM2G120610 GRMZM2G035377 GRMZM2G085691 GRMZM2G085824 GRMZM2G085827 GRMZM2G085872 GRMZM2G086242 GRMZM2G085885 GRMZM2G086269 GRMZM2G042552 GRMZM2G042539 Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - scaffold_9 Si038740m.g Si034592m.g Si037301m.g Si038672m.g Si036073m.g Si039279m.g Si034810m.g Si038007m.g Si035828m.g Si035550m.g Si037977m.g Si036653m.g Si036488m.g Si035505m.g Si034532m.g Si036468m.g Si036293m.g Si034582m.g Si038117m.g Si035973m.g Si037932m.g Si038664m.g Si034173m.g Si033838m.g Si035956m.g Click to show this node (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis duplication node (click to collapse) Click to show this node (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis duplication node (click to collapse) Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:8 GSMUA_Achr8G11420_001 GSMUA_Achr8G11430_001 GSMUA_Achr8G11440_001 GSMUA_Achr8G11450_001 GSMUA_Achr8G11460_001 GSMUA_Achr8G11470_001 GSMUA_Achr8G11480_001 GSMUA_Achr8G11490_001 GSMUA_Achr8G11500_001 GSMUA_Achr8G11520_001 GSMUA_Achr8G11530_001 GSMUA_Achr8G11540_001 GSMUA_Achr8G11550_001 GSMUA_Achr8G11560_001 GSMUA_Achr8G11580_001 GSMUA_Achr8G11590_001 GSMUA_Achr8G11600_001 GSMUA_Achr8G11610_001 GSMUA_Achr8G11620_001 GSMUA_Achr8G11630_001 GSMUA_Achr8G11640_001 GSMUA_Achr8G11650_001 GSMUA_Achr8G11660_001 GSMUA_Achr8G11670_001 GSMUA_Achr8G11680_001 GSMUA_Achr8G11690_001 GSMUA_Achr8G11700_001 GSMUA_Achr8G11710_001 GSMUA_Achr8G11720_001 Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:11 GSMUA_Achr11G21750_001 GSMUA_Achr11G21760_001 GSMUA_Achr11G21770_001 GSMUA_Achr11G21780_001 GSMUA_Achr11G21790_001 GSMUA_Achr11G21800_001 GSMUA_Achr11G21810_001 GSMUA_Achr11G21820_001 GSMUA_Achr11G21830_001 GSMUA_Achr11G21840_001 GSMUA_Achr11G21850_001 GSMUA_Achr11G21860_001 GSMUA_Achr11G21870_001 GSMUA_Achr11G21880_001 GSMUA_Achr11G21890_001 GSMUA_Achr11G21910_001 GSMUA_Achr11G21920_001 GSMUA_Achr11G21930_001 GSMUA_Achr11G21940_001 GSMUA_Achr11G21950_001 GSMUA_Achr11G21960_001 GSMUA_Achr11G21970_001 GSMUA_Achr11G21980_001 GSMUA_Achr11G21990_001 GSMUA_Achr11G22000_001 GSMUA_Achr11G22010_001 GSMUA_Achr11G22020_001 GSMUA_Achr11G22030_001 GSMUA_Achr11G22040_001 GSMUA_Achr11G22050_001 Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:4 GSMUA_Achr4G29190_001 GSMUA_Achr4G29200_001 GSMUA_Achr4G29210_001 GSMUA_Achr4G29220_001 GSMUA_Achr4G29230_001 GSMUA_Achr4G29240_001 GSMUA_Achr4G29250_001 GSMUA_Achr4G29260_001 GSMUA_Achr4G29270_001 GSMUA_Achr4G29280_001 GSMUA_Achr4G29290_001 GSMUA_Achr4G29300_001 GSMUA_Achr4G29310_001 GSMUA_Achr4G29320_001 GSMUA_Achr4G29330_001 GSMUA_Achr4G29350_001 GSMUA_Achr4G29360_001 GSMUA_Achr4G29370_001 GSMUA_Achr4G29380_001 GSMUA_Achr4G29390_001 GSMUA_Achr4G29400_001 GSMUA_Achr4G29410_001 GSMUA_Achr4G29420_001 GSMUA_Achr4G29430_001 GSMUA_Achr4G29440_001 GSMUA_Achr4G29450_001 GSMUA_Achr4G29460_001 GSMUA_Achr4G29470_001 GSMUA_Achr4G29480_001 GSMUA_Achr4G29490_001 Click to show this node (core eudicotyledons) core eudicotyledons duplication node (click to collapse) Click to show this node (core eudicotyledons) core eudicotyledons duplication node (click to collapse) Click to hide this line (core eudicotyledons) core eudicotyledons speciation node (click to collapse) core eudicotyledons Click to hide this line (rosids) rosids speciation node (click to collapse) rosids Click to hide this line (fabids) fabids speciation node (click to collapse) fabids Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm10 GLYMA10G06990 GLYMA10G07005 GLYMA10G07020 GLYMA10G07030 GLYMA10G07050 GLYMA10G07060 GLYMA10G07075 GLYMA10G07090 GLYMA10G07110 GLYMA10G07120 GLYMA10G07133 GLYMA10G07146 GLYMA10G07160 GLYMA10G07170 GLYMA10G07180 GLYMA10G07220 GLYMA10G07230 GLYMA10G07240 GLYMA10G07251 GLYMA10G07260 GLYMA10G07270 GLYMA10G07280 GLYMA10G07290 GLYMA10G07300 GLYMA10G07320 GLYMA10G07340 GLYMA10G07351 GLYMA10G07360 GLYMA10G07381 Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm13 GLYMA13G20920 GLYMA13G20930 GLYMA13G20940 GLYMA13G20950 GMA.29279 (GLYMA13G20960) GLYMA13G20970 GLYMA13G20980 GLYMA13G20990 GLYMA13G21010 GLYMA13G21020 GLYMA13G21030 GLYMA13G21050 GLYMA13G21056 GLYMA13G21063 GLYMA13G21070 GLYMA13G21096 GLYMA13G21120 GLYMA13G21131 GLYMA13G21140 GLYMA13G21155 GLYMA13G21170 GLYMA13G21180 GLYMA13G21190 GLYMA13G21200 GLYMA13G21211 GLYMA13G21220 GLYMA13G21230 GLYMA13G21240 GLYMA13G21250 Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:6 POPTRDRAFT_589531 (POPTR_0006s12050) POPTR_0006s12060 POPTRDRAFT_589529 (POPTR_0006s12080) POPTRDRAFT_916054 (POPTR_0006s12090) POPTRDRAFT_589527 (POPTR_0006s12100) POPTRDRAFT_589526 (POPTR_0006s12110) POPTRDRAFT_676122 (POPTR_0006s12120) POPTR_0006s12130 POPTRDRAFT_589523 (POPTR_0006s12140) COMTL4 (POPTR_0006s12160) POPTRDRAFT_916479 (POPTR_0006s12170) POPTR_0006s12180 POPTR_0006s12190 POPTRDRAFT_589514 (POPTR_0006s12220) POPTRDRAFT_676110 (POPTR_0006s12230) XM_002326181.1 (POPTR_0006s12240) POPTR_0006s12250 POPTRDRAFT_781150 (POPTR_0006s12260) POPTRDRAFT_781149 (POPTR_0006s12270) POPTRDRAFT_589509 (POPTR_0006s12280) POPTRDRAFT_836244 (POPTR_0006s12290) POPTRDRAFT_282262 (POPTR_0006s12300) POPTRDRAFT_667866 (POPTR_0006s12310) POPTR_0006s12320 POPTRDRAFT_676092 (POPTR_0006s12330) POPTR_0006s12340 POPTRDRAFT_589502 (POPTR_0006s12350) Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:8 Vv08s0007g04350 Vv08s0007g04360 Vv08s0007g04370 Vv08s0007g04380 Vv08s0007g04390 Vv08s0007g04400 Vv08s0007g04430 Vv08s0007g04440 Vv08s0007g04460 Vv08s0007g04470 Vv08s0007g04480 Vv08s0007g04490 Vv08s0007g04500 Vv08s0007g04520 Vv08s0007g04540 Vv08s0007g04550 Vv08s0007g04560 Vv08s0007g04570 Vv08s0007g04580 Vv08s0007g04590 Vv08s0007g04600 Vv08s0007g04610 Vv08s0007g04620 Vv08s0007g04630 Vv08s0007g04650 Vv08s0007g04670 Vv08s0007g04680 Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch09 PGSC0003DMG400012982 (PGSC0003DMG400012982) PGSC0003DMG400012989 (PGSC0003DMG400012989) PGSC0003DMG400046725 (PGSC0003DMG400046725) PGSC0003DMG400043255 (PGSC0003DMG400043255) PGSC0003DMG400044414 (PGSC0003DMG400044414) PGSC0003DMG400043714 (PGSC0003DMG400043714) PGSC0003DMG400046284 (PGSC0003DMG400046284) PGSC0003DMG400039322 (PGSC0003DMG400039322) PGSC0003DMG400034995 (PGSC0003DMG400034995) PGSC0003DMG400003904 (PGSC0003DMG400003904) PGSC0003DMG400003880 (PGSC0003DMG400003880) PGSC0003DMG400036652 (PGSC0003DMG400036652) PGSC0003DMG400003879 (PGSC0003DMG400003879) PGSC0003DMG400043390 (PGSC0003DMG400043390) PGSC0003DMG400003902 (PGSC0003DMG400003902) PGSC0003DMG400003901 (PGSC0003DMG400003901) PGSC0003DMG400003878 (PGSC0003DMG400003878) PGSC0003DMG400043520 (PGSC0003DMG400043520) PGSC0003DMG400003877 (PGSC0003DMG400003877) PGSC0003DMG400003910 (PGSC0003DMG400003910) PGSC0003DMG400003909 (PGSC0003DMG400003909) PGSC0003DMG400003908 (PGSC0003DMG400003908) PGSC0003DMG402003900 (PGSC0003DMG402003900) PGSC0003DMG401003900 (PGSC0003DMG401003900) PGSC0003DMG402003899 (PGSC0003DMG402003899) PGSC0003DMG401003899 (PGSC0003DMG401003899) PGSC0003DMG400003874 (PGSC0003DMG400003874) PGSC0003DMG400003898 (PGSC0003DMG400003898) PGSC0003DMG400003873 (PGSC0003DMG400003873) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:9 Solyc09g008380.2 Solyc09g008390.1 Solyc09g008400.2 Solyc09g008410.2 Solyc09g008420.2 Solyc09g008430.2 Solyc09g008440.1 Solyc09g008450.2 Solyc09g008460.2 Solyc09g008470.2 Solyc09g008480.2 Solyc09g008490.2 Solyc09g008500.1 Solyc09g008510.1 Solyc09g008520.2 Solyc09g008540.1 Solyc09g008550.2 Solyc09g008560.2 Solyc09g008590.2 Solyc09g008600.2 Solyc09g008610.2 Solyc09g008620.1 Solyc09g008630.2 Solyc09g008640.1 Solyc09g008650.2 Solyc09g008660.2 TD (Solyc09g008670.2) Solyc09g008680.2 Solyc09g008690.1 Solyc09g008700.1 Click to hide this line (core eudicotyledons) core eudicotyledons speciation node (click to collapse) core eudicotyledons Click to hide this line (rosids) rosids speciation node (click to collapse) rosids Click to hide this line (fabids) fabids speciation node (click to collapse) fabids Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:8 POPTRDRAFT_563663 (POPTR_0008s02830) POPTR_0008s02840 POPTR_0008s02850 POPTR_0008s02860 POPTR_0008s02870 POPTR_0008s02880 POPTR_0008s02890 POPTR_0008s02900 POPTR_0008s02910 POPTR_0008s02920 POPTR_0008s02930 POPTR_0008s02940 POPTR_0008s02950 POPTR_0008s02960 POPTR_0008s02970 POPTR_0008s02990 POPTR_0008s03000 POPTR_0008s03010 POPTR_0008s03020 POPTR_0008s03030 POPTR_0008s03040 POPTR_0008s03050 HTB902 (POPTR_0008s03060) POPTR_0008s03070 POPTRDRAFT_765221 (POPTR_0008s03080) POPTRDRAFT_765222 (POPTR_0008s03090) POPTRDRAFT_765223 (POPTR_0008s03100) POPTRDRAFT_563656 (POPTR_0008s03110) POPTRDRAFT_563662 (POPTR_0008s03120) POPTR_0008s03130 Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm10 GLYMA10G34090 GLYMA10G34100 GLYMA10G34110 GLYMA10G34120 GLYMA10G34130 GLYMA10G34141 GLYMA10G34150 GLYMA10G34161 GLYMA10G34170 GLYMA10G34180 GLYMA10G34190 GLYMA10G34205 GLYMA10G34220 GMA.56499 (GLYMA10G34231) GLYMA10G34240 LGB1 (GLYMA10G34260) GLYMA10G34270 GLYMA10G34275 GLYMA10G34280 LBA (GLYMA10G34290) GLYMA10G34301 GLYMA10G34310 GLYMA10G34320 GLYMA10G34340 GLYMA10G34350 GLYMA10G34360 GLYMA10G34370 GLYMA10G34380 GLYMA10G34390 GLYMA10G34410 Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:13 Vv13s0019g05240 Vv13s0019g05250 Vv13s0019g05260 Vv13s0019g05270 Vv13s0019g05280 Vv13s0019g05290 Vv13s0019g05300 Vv13s0019g05310 Vv13s0019g05320 Vv13s0019g05340 Vv13s0019g05350 Vv13s0019g05360 Vv13s0019g05370 Vv13s0019g05380 Vv13s0019g05390 Vv13s0074g00010 Vv13s0074g00030 Vv13s0074g00040 Vv13s0074g00050 Vv13s0074g00060 Vv13s0074g00070 Vv13s0074g00080 Vv13s0074g00090 Vv13s0074g00100 Vv13s0074g00110 Vv13s0074g00130 Vv13s0074g00140 Vv13s0074g00150 Vv13s0074g00160 Vv13s0074g00170 Click to show this node (Solanum) Solanum speciation node (click to collapse) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:11 Solyc11g007750.1 PDK1 (Solyc11g007760.1) Solyc11g007770.1 Solyc11g007780.1 Solyc11g007790.1 Solyc11g007800.1 Solyc11g007810.1 Solyc11g007820.1 PTPKIS1 (Solyc11g007830.1) Solyc11g007840.1 Solyc11g007850.1 Solyc11g007860.1 Solyc11g007870.1 Solyc11g007880.1 Solyc11g007890.1 Solyc11g007910.1 H2B-3 (Solyc11g007920.1) Solyc11g007930.1 Solyc11g007940.1 Solyc11g007950.1 Solyc11g007960.1 Solyc11g007970.1 Solyc11g007980.1 MDH (Solyc11g007990.1) Solyc11g008000.1 Solyc11g008010.1 Solyc11g008020.1 Solyc11g008030.1 Solyc11g008040.1 Solyc11g008050.1 Click to show this node (core eudicotyledons) core eudicotyledons speciation node (click to collapse) Click to show this node (rosids) rosids speciation node (click to collapse) Click to show this node (fabids) fabids speciation node (click to collapse) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:6 POPTR_0006s12060 POPTRDRAFT_589529 (POPTR_0006s12080) POPTRDRAFT_916054 (POPTR_0006s12090) POPTRDRAFT_589527 (POPTR_0006s12100) POPTRDRAFT_589526 (POPTR_0006s12110) POPTRDRAFT_676122 (POPTR_0006s12120) POPTR_0006s12130 POPTRDRAFT_589523 (POPTR_0006s12140) COMTL4 (POPTR_0006s12160) POPTRDRAFT_916479 (POPTR_0006s12170) POPTR_0006s12180 POPTR_0006s12190 POPTRDRAFT_589514 (POPTR_0006s12220) POPTRDRAFT_676110 (POPTR_0006s12230) XM_002326181.1 (POPTR_0006s12240) POPTR_0006s12250 POPTRDRAFT_781150 (POPTR_0006s12260) POPTRDRAFT_781149 (POPTR_0006s12270) POPTRDRAFT_589509 (POPTR_0006s12280) POPTRDRAFT_836244 (POPTR_0006s12290) POPTRDRAFT_282262 (POPTR_0006s12300) POPTRDRAFT_667866 (POPTR_0006s12310) POPTR_0006s12320 POPTRDRAFT_676092 (POPTR_0006s12330) POPTR_0006s12340 POPTRDRAFT_589502 (POPTR_0006s12350) POPTRDRAFT_826454 (POPTR_0006s12360) Click to hide this line (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Magnoliophyta Click to hide this line (core eudicotyledons) core eudicotyledons speciation node (click to collapse) core eudicotyledons Click to hide this line (rosids) rosids speciation node (click to collapse) rosids Click to hide this line (fabids) fabids speciation node (click to collapse) fabids Click to show this node (Populus trichocarpa) Populus trichocarpa duplication node (click to collapse) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:5 POPTRDRAFT_209688 (POPTR_0005s16300) POPTRDRAFT_209684 (POPTR_0005s16310) POPTRDRAFT_818500 (POPTR_0005s16320) POPTRDRAFT_760850 (POPTR_0005s16330) POPTRDRAFT_760849 (POPTR_0005s16340) POPTRDRAFT_559165 (POPTR_0005s16350) POPTR_0005s16360 POPTR_0005s16370 POPTRDRAFT_831485 (POPTR_0005s16380) POPTRDRAFT_760845 (POPTR_0005s16390) POPTR_0005s16400 POPTRDRAFT_716554 (POPTR_0005s16410) POPTRDRAFT_559157 (POPTR_0005s16420) POPTRDRAFT_651341 (POPTR_0005s16430) POPTRDRAFT_651340 (POPTR_0005s16440) POPTRDRAFT_818495 (POPTR_0005s16460) POPTRDRAFT_559152 (POPTR_0005s16470) POPTRDRAFT_760836 (POPTR_0005s16480) POPTRDRAFT_801228 (POPTR_0005s16490) POPTR_0005s16500 POPTRDRAFT_760832 (POPTR_0005s16510) POPTR_0005s16520 POPTRDRAFT_760831 (POPTR_0005s16530) POPTRDRAFT_559146 (POPTR_0005s16540) POPTRDRAFT_651320 (POPTR_0005s16550) POPTR_0005s16560 POPTR_0005s16570 POPTRDRAFT_716542 (POPTR_0005s16580) POPTRDRAFT_209602 (POPTR_0005s16590) POPTRDRAFT_818490 (POPTR_0005s16600) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:2 SHMT4 (POPTR_0002s09080) POPTRDRAFT_754653 (POPTR_0002s09090) POPTRDRAFT_754654 (POPTR_0002s09100) POPTRDRAFT_710235 (POPTR_0002s09110) POPTRDRAFT_816316 (POPTR_0002s09120) POPTR_0002s09130 POPTRDRAFT_754658 (POPTR_0002s09140) POPTRDRAFT_816318 (POPTR_0002s09150) POPTRDRAFT_1071665 (POPTR_0002s09160) POPTR_0002s09170 POPTRDRAFT_643701 (POPTR_0002s09180) POPTRDRAFT_410339 (POPTR_0002s09190) POPTR_0002s09200 POPTRDRAFT_710171 (POPTR_0002s09210) POPTRDRAFT_551532 (POPTR_0002s09220) POPTRDRAFT_754667 (POPTR_0002s09240) POPTRDRAFT_643710 (POPTR_0002s09250) POPTRDRAFT_551536 (POPTR_0002s09260) POPTR_0002s09270 POPTRDRAFT_551538 (POPTR_0002s09280) POPTRDRAFT_643714 (POPTR_0002s09290) POPTRDRAFT_830213 (POPTR_0002s09300) POPTRDRAFT_551540 (POPTR_0002s09310) POPTRDRAFT_551541 (POPTR_0002s09320) POPTRDRAFT_830215 (POPTR_0002s09330) POPTRDRAFT_643728 (POPTR_0002s09340) POPTRDRAFT_551545 (POPTR_0002s09350) POPTR_0002s09360 POPTR_0002s09370 POPTRDRAFT_754682 (POPTR_0002s09380) Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm04 GLYMA04G11616 GLYMA04G11628 GLYMA04G11640 GLYMA04G11730 GLYMA04G11776 GLYMA04G11823 GLYMA04G11870 GLYMA04G11890 GLYMA04G11941 GLYMA04G11991 GLYMA04G12040 GLYMA04G12052 GLYMA04G12064 GLYMA04G12077 GLYMA04G12090 GLYMA04G12110 GLYMA04G12120 GLYMA04G12130 GLYMA04G12143 GLYMA04G12156 GLYMA04G12170 GLYMA04G12180 GLYMA04G12191 GLYMA04G12200 GLYMA04G12220 GLYMA04G12230 GLYMA04G12240 GLYMA04G12256 GLYMA04G12273 GLYMA04G12290 Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm06 GLYMA06G11050 GLYMA06G11060 GLYMA06G11070 GLYMA06G11081 GLYMA06G11090 GLYMA06G11110 GLYMA06G11120 GLYMA06G11131 GLYMA06G11140 GLYMA06G11150 GLYMA06G11161 GLYMA06G11171 GLYMA06G11181 GLYMA06G11190 GLYMA06G11210 GLYMA06G11225 GLYMA06G11230 GLYMA06G11240 GLYMA06G11250 GLYMA06G11260 GLYMA06G11270 GLYMA06G11280 GLYMA06G11290 GLYMA06G11300 GLYMA06G11310 GLYMA06G11320 GLYMA06G11330 GLYMA06G11340 GLYMA06G11351 GLYMA06G11361 Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:18 Vv18s0001g04380 Vv18s0001g04400 Vv18s0001g04420 Vv18s0001g04440 Vv18s0001g04470 Vv18s0001g04500 Vv18s0001g04520 Vv18s0001g04540 Vv18s0001g04580 Vv18s0001g04590 Vv18s0001g04600 Vv18s0001g04610 Vv18s0001g04630 Vv18s0001g04640 Vv18s0001g04660 Vv18s0001g04700 Vv18s0001g04730 Vv18s0001g04750 Vv18s0001g04760 Vv18s0001g04770 Vv18s0001g04790 Vv18s0001g04800 Vv18s0001g04810 Vv18s0001g04850 Vv18s0001g04860 Vv18s0001g04880 Vv18s0001g04890 Vv18s0001g04910 Vv18s0001g04920 Vv18s0001g04930 Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis Click to hide this line (Arabidopsis lyrata subsp. lyrata) Arabidopsis lyrata subsp. lyrata terminal node Arabidopsis lyrata subsp. lyrata - Chr:1 XM_002893156.1 (scaffold_102482.1) XM_002893157.1 (scaffold_102483.1) XM_002893158.1 (fgenesh2_kg.1__2386__AT1G21970.1) XM_002893159.1 (Al_scaffold_0001_2303) XM_002890436.1 (fgenesh2_kg.1__2387__AT1G21980.1) XM_002890437.1 (scaffold_102488.1) XM_002890438.1 (fgenesh2_kg.1__2388__AT1G22010.1) XM_002893160.1 (fgenesh2_kg.1__2389__AT1G22015.1) XM_002890439.1 (fgenesh2_kg.1__2390__AT1G22020.1) XM_002893161.1 (Al_scaffold_0001_2309) XM_002890440.1 (fgenesh1_pm.C_scaffold_1001872) XM_002890441.1 (fgenesh2_kg.1__2392__AT1G22040.1) XM_002890442.1 (fgenesh2_kg.1__2393__AT1G22050.1) XM_002893162.1 (scaffold_102497.1) XM_002890443.1 (scaffold_102498.1) XM_002890444.1 (scaffold_102500.1) XM_002890445.1 (fgenesh2_kg.1__2395__AT1G22070.1) XM_002890446.1 (scaffold_102502.1) XM_002890447.1 (Al_scaffold_0001_2316) XM_002893164.1 (fgenesh1_pm.C_scaffold_1001878) XM_002893165.1 (fgenesh2_kg.1__2398__AT1G22110.1) XM_002893166.1 (fgenesh1_pm.C_scaffold_1001880) XM_002893167.1 (Al_scaffold_0001_2320) XM_002893168.1 (Al_scaffold_0001_2321) XM_002890448.1 (fgenesh1_pm.C_scaffold_1001883) XM_002890449.1 (fgenesh1_pg.C_scaffold_1002023) XM_002890450.1 (fgenesh2_kg.1__2403__AT1G22160.1) XM_002890451.1 (fgenesh2_kg.1__2404__AT1G22170.1) XM_002893169.1 (scaffold_102513.1) XM_002890452.1 (fgenesh2_kg.1__2408__AT1G22190.1) Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:1 AT1G21930 (AT1G21930) AT1G21940 (AT1G21940) AT1G21950 (AT1G21950) AT1G21960 (AT1G21960) LEC1 (AT1G21970) AT1G21975 (AT1G21975) PIP5K1 (AT1G21980) AT1G21990 (AT1G21990) AT1G22000 (AT1G22000) AT1G22010 (AT1G22010) DD46 (AT1G22015) SHM6 (AT1G22020) AT1G22030 (AT1G22030) AT1G22040 (AT1G22040) MUB6 (AT1G22050) AT1G22065 (AT1G22065) AT1G22067 (AT1G22067) TGA3 (AT1G22070) AT1G22080 (AT1G22080) emb2204 (AT1G22090) AT1G22100 (AT1G22100) AT1G22110 (AT1G22110) AT1G22120 (AT1G22120) AGL104 (AT1G22130) AT1G22140 (AT1G22140) SULTR1;3 (AT1G22150) AT1G22160 (AT1G22160) AT1G22170 (AT1G22170) AT1G22180 (AT1G22180) AT1G22190 (AT1G22190) Click to hide this line (Brassica rapa subsp. pekinensis) Brassica rapa subsp. pekinensis terminal node Brassica rapa subsp. pekinensis - Chr:A05 Bra031377 (Bra031377) Bra031376 (Bra031376) Bra031375 (Bra031375) Bra031374 (Bra031374) Bra031373 (Bra031373) Bra031372 (Bra031372) Bra031371 (Bra031371) Bra031370 (Bra031370) Bra031369 (Bra031369) Bra031368 (Bra031368) Bra031367 (Bra031367) Bra031366 (Bra031366) Bra031365 (Bra031365) Bra031364 (Bra031364) Bra031363 (Bra031363) Bra031361 (Bra031361) Bra031360 (Bra031360) Bra031359 (Bra031359) Bra031358 (Bra031358) Bra031357 (Bra031357) Bra031356 (Bra031356) Bra031355 (Bra031355) Bra031354 (Bra031354) Bra031353 (Bra031353) Bra031352 (Bra031352) Bra031351 (Bra031351) Bra031350 (Bra031350) Bra031349 (Bra031349) Bra031348 (Bra031348) Bra031347 (Bra031347) Click to show this node (Solanum) Solanum speciation node (click to collapse) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:4 Solyc04g072480.2 Solyc04g072490.2 Solyc04g072500.1 Solyc04g072510.2 Solyc04g072520.1 Solyc04g072530.2 Solyc04g072540.2 Solyc04g072550.1 Solyc04g072560.2 SERK1 (Solyc04g072570.2) Solyc04g072580.1 Solyc04g072590.1 Solyc04g072600.1 Solyc04g072610.2 Solyc04g072620.1 Solyc04g072640.2 Solyc04g072650.1 Solyc04g072660.2 Solyc04g072670.2 Solyc04g072680.1 Solyc04g072690.2 Solyc04g072700.2 Solyc04g072710.1 Solyc04g072720.2 Solyc04g072730.1 Solyc04g072740.2 Solyc04g072750.2 Solyc04g072760.2 Solyc04g072770.2 Solyc04g072780.2 Click to hide this line (commelinids) commelinids speciation node (click to collapse) commelinids Click to show this node (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis duplication node (click to collapse) Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:10 GSMUA_Achr10G25700_001 GSMUA_Achr10G25710_001 GSMUA_Achr10G25720_001 GSMUA_Achr10G25730_001 GSMUA_Achr10G25740_001 GSMUA_Achr10G25750_001 GSMUA_Achr10G25760_001 GSMUA_Achr10G25770_001 GSMUA_Achr10G25780_001 GSMUA_Achr10G25790_001 GSMUA_Achr10G25800_001 GSMUA_Achr10G25810_001 GSMUA_Achr10G25820_001 GSMUA_Achr10G25830_001 GSMUA_Achr10G25840_001 GSMUA_Achr10G25860_001 GSMUA_Achr10G25870_001 GSMUA_Achr10G25880_001 GSMUA_Achr10G25890_001 GSMUA_Achr10G25900_001 GSMUA_Achr10G25910_001 GSMUA_Achr10G25920_001 GSMUA_Achr10G25930_001 GSMUA_Achr10G25940_001 GSMUA_Achr10G25950_001 GSMUA_Achr10G25960_001 GSMUA_Achr10G25970_001 GSMUA_Achr10G25980_001 GSMUA_Achr10G25990_001 GSMUA_Achr10G26000_001 Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:7 GSMUA_Achr7G11510_001 GSMUA_Achr7G11520_001 GSMUA_Achr7G11530_001 GSMUA_Achr7G11540_001 GSMUA_Achr7G11550_001 GSMUA_Achr7G11560_001 GSMUA_Achr7G11570_001 GSMUA_Achr7G11580_001 GSMUA_Achr7G11590_001 GSMUA_Achr7G11600_001 GSMUA_Achr7G11610_001 GSMUA_Achr7G11620_001 GSMUA_Achr7G11630_001 GSMUA_Achr7G11640_001 GSMUA_Achr7G11650_001 GSMUA_Achr7G11670_001 GSMUA_Achr7G11680_001 GSMUA_Achr7G11690_001 GSMUA_Achr7G11700_001 GSMUA_Achr7G11710_001 GSMUA_Achr7G11720_001 GSMUA_Achr7G11730_001 GSMUA_Achr7G11740_001 GSMUA_Achr7G11750_001 GSMUA_Achr7G11760_001 GSMUA_Achr7G11770_001 GSMUA_Achr7G11780_001 GSMUA_Achr7G11790_001 GSMUA_Achr7G11800_001 GSMUA_Achr7G11810_001 Click to hide this line (Poaceae) Poaceae speciation node (click to collapse) Poaceae Click to hide this line (BEP clade) BEP clade speciation node (click to collapse) BEP clade Click to hide this line (Pooideae) Pooideae speciation node (click to collapse) Pooideae Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:3 BRADI3G03160 BRADI3G03170 BRADI3G03180 BRADI3G03185 BRADI3G03187 BRADI3G03192 BRADI3G03200 BRADI3G03210 BRADI3G03220 BRADI3G03230 BRADI3G03240 BRADI3G03250 BRADI3G03260 BRADI3G03270 BRADI3G03280 BRADI3G03295 BRADI3G03300 BRADI3G03310 BRADI3G03317 BRADI3G03330 BRADI3G03340 BRADI3G03350 BRADI3G03360 BRADI3G03370 BRADI3G03380 BRADI3G03390 BRADI3G03400 BRADI3G03407 BRADI3G03420 BRADI3G03430 Click to hide this line (Hordeum vulgare subsp. vulgare) Hordeum vulgare subsp. vulgare terminal node Hordeum vulgare subsp. vulgare - Chr:morex_scaffold_45852 Click to hide this line (Oryza) Oryza speciation node (click to collapse) Oryza Click to hide this line (Oryza sativa) Oryza sativa speciation node (click to collapse) Oryza sativa Click to hide this line (Oryza sativa Indica Group) Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:10 OsI_33215 (BGIOSGA032076) OS10G0361350 (BGIOSGA032765) OSJNBA0058E19.13 (BGIOSGA032766) OSJNBA0073L01.4 (BGIOSGA032767) OHK3 (BGIOSGA032075) OsI_33220 (BGIOSGA032768) OsI_33221 (BGIOSGA032074) OSJNBA0073L01.8 (BGIOSGA032769) OSJNBA0073L01.11 (BGIOSGA032073) OS10G0363100 (BGIOSGA032770) OsI_33225 (BGIOSGA032771) OS10G0363300 (BGIOSGA032772) OS10G0363500 (BGIOSGA032773) OsI_33228 (BGIOSGA032072) OSJNBA0073L01.3 (BGIOSGA032774) OsI_33231 (BGIOSGA032070) OsI_33232 (BGIOSGA032775) OSJNBB0089F16.6 (BGIOSGA032776) OS10G0364900 (BGIOSGA032777) OsI_33235 (BGIOSGA032778) OsI_33236 (BGIOSGA032779) OsI_33237 (BGIOSGA032780) OSJNBB0089F16.16 (BGIOSGA032069) OsI_33239 (BGIOSGA032781) OS10G0365800 (BGIOSGA032782) OsI_33241 (BGIOSGA032783) OSJNBB0089F16.20 (BGIOSGA032068) OS10G0366400 (BGIOSGA032784) OsI_33244 (BGIOSGA032067) OsI_33245 (BGIOSGA032066) Click to hide this line (Oryza sativa Japonica Group) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:10 LOC_Os10g21784 LOC_Os10g21790 LOC_Os10g21800 LOC_Os10g21810 LOC_Os10g21820 LOC_Os10g21830 LOC_Os10g21840 LOC_Os10g21850 LOC_Os10g21860 LOC_Os10g21870 LOC_Os10g21880 LOC_Os10g21890 LOC_Os10g21910 LOC_Os10g21920 LOC_Os10g21930 LOC_Os10g21950 LOC_Os10g21956 LOC_Os10g21962 LOC_Os10g21970 LOC_Os10g21980 LOC_Os10g21990 LOC_Os10g22000 LOC_Os10g22010 LOC_Os10g22020 LOC_Os10g22030 LOC_Os10g22039 LOC_Os10g22050 LOC_Os10g22060 LOC_Os10g22070 LOC_Os10g22080 Click to hide this line (Oryza glaberrima) Oryza glaberrima terminal node Oryza glaberrima - Chr:10 ORGLA10G0058500 ORGLA10G0058600 ORGLA10G0058700 ORGLA10G0058800 ORGLA10G0058900 ORGLA10G0059000 ORGLA10G0059100 ORGLA10G0059200 ORGLA10G0059300 ORGLA10G0059400 ORGLA10G0059500 ORGLA10G0059600 ORGLA10G0059700 ORGLA10G0059800 ORGLA10G0059900 ORGLA10G0060100 ORGLA10G0060200 ORGLA10G0060300 ORGLA10G0060400 ORGLA10G0060500 ORGLA10G0060600 ORGLA10G0060700 ORGLA10G0060800 ORGLA10G0060900 ORGLA10G0061000 ORGLA10G0061100 ORGLA10G0061200 ORGLA10G0061300 ORGLA10G0061400 ORGLA10G0061500 Click to hide this line (Oryza brachyantha) Oryza brachyantha terminal node Oryza brachyantha - Chr:10 OB10G15580 OB10G15590 OB10G15600 OB10G15610 OB10G15620 OB10G15630 OB10G15640 OB10G15650 OB10G15660 OB10G15670 OB10G15680 OB10G15690 OB10G15700 OB10G15710 OB10G15720 OB10G15740 OB10G15750 OB10G15760 OB10G15770 OB10G15780 OB10G15790 OB10G15800 OB10G15810 OB10G15820 OB10G15830 OB10G15840 OB10G15850 OB10G15860 OB10G15870 OB10G15880 Click to hide this line (Panicoideae) Panicoideae speciation node (click to collapse) Panicoideae Click to hide this line (Andropogoneae) Andropogoneae speciation node (click to collapse) Andropogoneae Click to show this node (Zea mays) Zea mays duplication node (click to collapse) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:3 GRMZM2G309479 GRMZM5G839699 GRMZM5G813403 GRMZM2G361475 GRMZM2G061446 GRMZM5G843368 GRMZM2G454124 GRMZM2G103342 GRMZM2G171484 GRMZM2G171478 GRMZM2G171430 GRMZM5G861681 GRMZM2G171390 GRMZM2G179465 GRMZM2G136687 GRMZM2G136635 GRMZM2G565784 GRMZM2G016368 GRMZM2G016382 GRMZM5G886909 GRMZM2G481548 GRMZM2G060536 GRMZM2G060540 AC182110.4_FG002 GRMZM2G123805 GRMZM2G059730 GRMZM2G059711 L-FNRII (GRMZM2G059083) GRMZM2G059642 Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:3 GRMZM5G893075 GRMZM2G309479 GRMZM5G839699 GRMZM5G813403 GRMZM2G361475 GRMZM2G061446 GRMZM5G843368 GRMZM2G454124 GRMZM2G103342 GRMZM2G171484 GRMZM2G171478 GRMZM2G171430 GRMZM5G861681 GRMZM2G171390 GRMZM2G179465 GRMZM2G136687 GRMZM2G136635 GRMZM2G565784 GRMZM2G016368 GRMZM2G016382 GRMZM5G886909 GRMZM2G481548 GRMZM2G060536 GRMZM2G060540 AC182110.4_FG002 GRMZM2G123805 GRMZM2G059730 GRMZM2G059711 L-FNRII (GRMZM2G059083) Click to show this node (Sorghum bicolor) Sorghum bicolor duplication node (click to collapse) Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:3 SB03G046510 (Sb03g046510) SB03G046520 (Sb03g046520) SB03G046530 (Sb03g046530) SB03G046540 (Sb03g046540) SB03G046545 (Sb03g046545) SB03G046550 (Sb03g046550) SB03G046560 (Sb03g046560) SB03G046570 (Sb03g046570) Sb03g046580 SB03G046590 (Sb03g046590) SB03G046600 (Sb03g046600) SB03G046610 (Sb03g046610) SB03G046613 (Sb03g046613) SB03G046616 (Sb03g046616) SB03G046640 (Sb03g046640) SB03G046650 (Sb03g046650) SB03G046660 (Sb03g046660) SB03G046670 (Sb03g046670) SB03G046680 (Sb03g046680) SB03G046690 (Sb03g046690) SB03G046700 (Sb03g046700) SB03G046710 (Sb03g046710) SB03G046720 (Sb03g046720) SB03G046730 (Sb03g046730) SB03G046740 (Sb03g046740) SB03G046750 (Sb03g046750) SB03G046760 (Sb03g046760) SB03G046762 (Sb03g046762) SB03G046765 (Sb03g046765) Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:3 SB03G046500 (Sb03g046500) SB03G046510 (Sb03g046510) SB03G046520 (Sb03g046520) SB03G046530 (Sb03g046530) SB03G046540 (Sb03g046540) SB03G046545 (Sb03g046545) SB03G046550 (Sb03g046550) SB03G046560 (Sb03g046560) SB03G046570 (Sb03g046570) Sb03g046580 SB03G046590 (Sb03g046590) SB03G046600 (Sb03g046600) SB03G046610 (Sb03g046610) SB03G046613 (Sb03g046613) SB03G046616 (Sb03g046616) SB03G046640 (Sb03g046640) SB03G046650 (Sb03g046650) SB03G046660 (Sb03g046660) SB03G046670 (Sb03g046670) SB03G046680 (Sb03g046680) SB03G046690 (Sb03g046690) SB03G046700 (Sb03g046700) SB03G046710 (Sb03g046710) SB03G046720 (Sb03g046720) SB03G046730 (Sb03g046730) SB03G046740 (Sb03g046740) SB03G046750 (Sb03g046750) SB03G046760 (Sb03g046760) SB03G046762 (Sb03g046762) Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - scaffold_9 Si035052m.g Si039551m.g Si040265m.g Si038999m.g Si040365m.g Si039902m.g Si037411m.g Si040755m.g Si040825m.g Si039273m.g Si038319m.g Si037658m.g Si038828m.g Si039254m.g Si037122m.g Si035485m.g Si040448m.g Si035290m.g Si039534m.g Si033837m.g Si033958m.g Si039230m.g Si040280m.g Si039829m.g Si038580m.g Si035516m.g Si039211m.g Si036265m.g Si036071m.g Si038757m.g Click to show this node (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Click to show this node (commelinids) commelinids speciation node (click to collapse) Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:9 GSMUA_Achr9G21670_001 GSMUA_Achr9G21680_001 GSMUA_Achr9G21690_001 GSMUA_Achr9G21700_001 GSMUA_Achr9G21710_001 GSMUA_Achr9G21720_001 GSMUA_Achr9G21730_001 GSMUA_Achr9G21740_001 GSMUA_Achr9G21750_001 GSMUA_Achr9G21760_001 GSMUA_Achr9G21770_001 GSMUA_Achr9G21780_001 GSMUA_Achr9G21790_001 GSMUA_Achr9G21800_001 GSMUA_Achr9G21810_001 GSMUA_Achr9G21840_001 GSMUA_Achr9G21850_001 GSMUA_Achr9G21860_001 GSMUA_Achr9G21870_001 GSMUA_Achr9G21880_001 GSMUA_Achr9G21890_001 GSMUA_Achr9G21900_001 GSMUA_Achr9G21910_001 GSMUA_Achr9G21920_001 GSMUA_Achr9G21930_001 GSMUA_Achr9G21940_001 GSMUA_Achr9G21950_001 GSMUA_Achr9G21960_001 GSMUA_Achr9G21970_001 Click to hide this line (Physcomitrella patens subsp. patens) Physcomitrella patens subsp. patens terminal node Physcomitrella patens subsp. patens - Chr:DS545037.1 PP1S148_31V6 PP1S148_34V6 A9T0W7_PHYPA (PP1S148_36V6) PP1S148_40V6 PP1S148_42V6 A9T0X1_PHYPA (PP1S148_43V6) PP1S148_45V6 PP1S148_48V6 PP1S148_50V6 A9T0X3_PHYPA (PP1S148_49V6) A9T0X4_PHYPA (PP1S148_51V6) A9T0X5_PHYPA (PP1S148_55V6) PP1S148_56V6 A9T0X8_PHYPA (PP1S148_58V6) PP1S148_59V6 PP1S148_61V6 PP1S148_63V6 A9T0Y1_PHYPA (PP1S148_65V6) PP1S148_66V6 A9T0Y3_PHYPA (PP1S148_67V6) A9T0Y5_PHYPA (PP1S148_71V6) PP1S148_73V6 PP1S148_74V6 PP1S148_79V6 PP1S148_82V6 PP1S148_83V6 PP1S148_84V6 PP1S148_87V6 PP1S148_90V6 A9T0Z4_PHYPA (PP1S148_92V6) Click to show this node (Opisthokonta) Opisthokonta speciation node (click to collapse) Click to show this node (Coelomata) Coelomata speciation node (click to collapse) Click to show this node (Ecdysozoa) Ecdysozoa speciation node (click to collapse) Click to show this node (Drosophila melanogaster) Drosophila melanogaster duplication node (click to collapse) Click to show this node (Drosophila melanogaster) Drosophila melanogaster duplication node (click to collapse) Click to hide this line (Drosophila melanogaster) Drosophila melanogaster terminal node Drosophila melanogaster - Chr:3R CG34292 (FBgn0085321) spz (FBgn0003495) CG14257 (FBgn0039479) Cpr97Ea (FBgn0039480) Cpr97Eb (FBgn0039481) CG14258 (FBgn0039482) CG14259 (FBgn0039483) eater (FBgn0243514) CG17189 (FBgn0039485) CG6074 (FBgn0039486) gb (FBgn0039487) CG5815 (FBgn0027574) CG6066 (FBgn0039488) CG5880 (FBgn0039489) CG6051 (FBgn0039492) Men-b (FBgn0029155) grass (FBgn0039494) CG5909 (FBgn0039495) CG31065 (FBgn0051065) CG34293 (FBgn0085322) spn-D (FBgn0003482) Ser (FBgn0004197) CG34006 (FBgn0054006) CG42813 (FBgn0261995) CG42814 (FBgn0261996) CG31064 (FBgn0051064) CG31068 (FBgn0051068) DNApol-alpha73 (FBgn0005696) CG17991 (FBgn0039498) Click to hide this line (Drosophila melanogaster) Drosophila melanogaster terminal node Drosophila melanogaster - Chr:YHet kl-5 (FBgn0001315) kl-3 (FBgn0001314) kl-2 (FBgn0001313) Ppr-Y (FBgn0046697) Pp1-Y2 (FBgn0046698) CG41503 (FBgn0085787) Click to hide this line (Drosophila melanogaster) Drosophila melanogaster terminal node Drosophila melanogaster - Chr:3R Nep5 (FBgn0039478) CG34292 (FBgn0085321) spz (FBgn0003495) CG14257 (FBgn0039479) Cpr97Ea (FBgn0039480) Cpr97Eb (FBgn0039481) CG14258 (FBgn0039482) CG14259 (FBgn0039483) eater (FBgn0243514) CG17189 (FBgn0039485) CG6074 (FBgn0039486) gb (FBgn0039487) CG5815 (FBgn0027574) CG6066 (FBgn0039488) CG5880 (FBgn0039489) CG6051 (FBgn0039492) Men-b (FBgn0029155) grass (FBgn0039494) CG5909 (FBgn0039495) CG31065 (FBgn0051065) CG34293 (FBgn0085322) spn-D (FBgn0003482) Ser (FBgn0004197) CG34006 (FBgn0054006) CG42813 (FBgn0261995) CG42814 (FBgn0261996) CG31064 (FBgn0051064) CG31068 (FBgn0051068) DNApol-alpha73 (FBgn0005696) GRMZM2G424595 GRMZM2G117833 GRMZM2G090029 SB01G030060 (Sb01g030060) Si040208m.g BRADI3G32670 OSJNBA0001O14.8 (BGIOSGA031468) LOC_Os10g39920 ORGLA10G0126400 OB10G24700 GRMZM2G019353 BRADI1G78050 OS03G0107700 (BGIOSGA011675) OsI_09665 (BGIOSGA011677) LOC_Os03g01740 ORGLA03G0003900 OB03G10590 SB01G050130 (Sb01g050130) GRMZM2G413337 Si039635m.g GRMZM2G177400 SB01G030010 (Sb01g030010) GRMZM5G832453 GRMZM2G178481 GRMZM2G464885 SB01G029980 (Sb01g029980) Si036544m.g BRADI3G32760 OsI_34552 (BGIOSGA031465) OS10G0547950 (BGIOSGA031464) OSJNBA0082M15.7 (BGIOSGA031463) LOC_Os10g40000 LOC_Os10g40020 LOC_Os10g40030 ORGLA10G0127300 ORGLA10G0127500 ORGLA10G0127600 OB10G24770 GRMZM2G128577 SB01G029950 (Sb01g029950) SB01G029960 (Sb01g029960) Si039101m.g GRMZM5G801247 GRMZM2G017011 SB01G030090 (Sb01g030090) Si037746m.g BRADI3G32620 OSJNBA0001O14.14 (BGIOSGA033401) LOC_Os10g39890 ORGLA10G0126100 OB10G24670 POPTRDRAFT_589530 (POPTR_0006s12070) Vv08s0007g04410 Vv08s0007g04450 PGSC0003DMG400012983 (PGSC0003DMG400012983) POPTRDRAFT_589530 (POPTR_0006s12070) GRMZM5G899428 SB01G030110 (Sb01g030110) Si039039m.g OSJNBA0001O14.23 (BGIOSGA033399) LOC_Os10g39870 ORGLA10G0125700 OB10G24660 GRMZM2G177391 BRADI3G32810 OSIPA (BGIOSGA033408) LOC_Os10g40090 ORGLA10G0128100 OB10G24830 GRMZM2G020852 EXPB1 (GRMZM2G146551) GRMZM2G181202 BRADI1G78120 OsI_09650 (BGIOSGA011669) OS03G0106800 (BGIOSGA011610) OsI_09652 (BGIOSGA011609) OsI_09653 (BGIOSGA011608) LOC_Os03g01610 LOC_Os03g01630 LOC_Os03g01640 LOC_Os03g01650 ORGLA03G0002900 ORGLA03G0003000 ORGLA03G0003200 OB03G10490 OB03G10500 SB01G050180 (Sb01g050180) SB01G050190 (Sb01g050190) SB01G050200 (Sb01g050200) SB01G050210 (Sb01g050210) SB01G050190 (Sb01g050220) SB01G050230 (Sb01g050230) SB01G050240 (Sb01g050240) Si037106m.g Si039870m.g Si039613m.g GRMZM2G117840 EPlGT00160000044453.A EPlGT00160000044453.A EPlGT00160000044453.A.a.a EPlGT00160000044453.A.a.a EPlGT00160000044453.A.a.a.d EPlGT00160000044453.A.a.a.d EPlGT00160000044453.A.a.a.d GRMZM2G028033 SB01G030020 (Sb01g030020) Si039617m.g EPlGT00160000044453.A.a.a.d EPlGT00160000044453.A.a.a.d.a BRADI3G32710 MLOC_12244 MLOC_53357 EPlGT00160000044453.A.a.a.d EPlGT00160000044453.A.a.a.d OsI_34549 (BGIOSGA031467) LOC_Os10g39950 ORGLA10G0126900 OB10G24740 GSMUA_Achr8G11570_001 GSMUA_Achr11G21900_001 GSMUA_Achr4G29340_001 EPlGT00160000044453.A.a.a.e.a EPlGT00160000044453.A.a.a.e.a EPlGT00160000044453.A.a.a.e.a GLYMA10G07190 GLYMA13G21083 POPTRDRAFT_589516 (POPTR_0006s12200) POPTRDRAFT_826464 (POPTR_0006s12210) Vv08s0007g04510 EPlGT00160000044453.A.a.a.e.a PGSC0003DMG400003903 (PGSC0003DMG400003903) Solyc09g008530.1 EPlGT00160000044453.A.a.a.e.b EPlGT00160000044453.A.a.a.e.b EPlGT00160000044453.A.a.a.e.b POPTR_0008s02980 GLYMA10G34250 Vv13s0019g05400 Solyc11g007900.1 POPTRDRAFT_589516 (POPTR_0006s12200) POPTRDRAFT_826464 (POPTR_0006s12210) PP1S148_60V6 CG5882 (FBgn0039490) CG6059 (FBgn0039491) Ory (FBgn0046323) CG5882 (FBgn0039490) CG6059 (FBgn0039491) GRMZM2G336077 EPlGT00160000044453.A.a.a.c EPlGT00160000044453.A.a.a.c EPlGT00160000044453.A.a.a.c BRADI1G78090 MLOC_58892 EPlGT00160000044453.A.a.a.c EPlGT00160000044453.A.a.a.c OS03G0107400 (BGIOSGA011672) LOC_Os03g01710 ORGLA03G0003600 OB03G10550 EPlGT00160000044453.A.a.a.c EPlGT00160000044453.A.a.a.c.a SB01G050140 (Sb01g050140) GRMZM2G113163 GRMZM2G329177 Si033916m.g EPlGT00160000044453.A.a.b EPlGT00160000044453.A.a.b EPlGT00160000044453.A.a.b EPlGT00160000044453.A.a.b POPTR_0005s16450 POPTRDRAFT_643708 (POPTR_0002s09230) GLYMA04G12100 GLYMA06G11220 Vv18s0001g04680 EPlGT00160000044453.A.a.b EPlGT00160000044453.A.a.b XM_002893163.1 (scaffold_102499.1) AT1G22060 (AT1G22060) Bra031362 (Bra031362) Solyc04g072630.2 EPlGT00160000044453.A.a.b GSMUA_Achr10G25850_001 GSMUA_Achr7G11660_001 EPlGT00160000044453.A.a.b EPlGT00160000044453.A.a.b EPlGT00160000044453.A.a.b BRADI3G03290 MLOC_61771 EPlGT00160000044453.A.a.b EPlGT00160000044453.A.a.b OS10G0363700 (BGIOSGA032071) LOC_Os10g21940 ORGLA10G0060000 OB10G15730 EPlGT00160000044453.A.a.b EPlGT00160000044453.A.a.b GRMZM2G179421 GRMZM2G302913 GRMZM2G179421 GRMZM2G302913 SB03G046620 (Sb03g046620) SB03G046630 (Sb03g046630) SB03G046620 (Sb03g046620) SB03G046630 (Sb03g046630) Si033857m.g GSMUA_Achr9G21820_001 GSMUA_Achr9G21830_001 GRMZM2G005480 GRMZM2G177407 GRMZM5G895423 GRMZM2G143082 GRMZM2G469371 SB01G030040 (Sb01g030040) Si037410m.g BRADI3G32700 MLOC_53358 OsI_34539 (BGIOSGA033400) OsI_34548 (BGIOSGA033405) LOC_Os10g39936 ORGLA10G0126700 GRMZM5G852014 GRMZM2G113761 Si039252m.g OSJNBA0001O14.5 (BGIOSGA033397) LOC_Os10g39840 ORGLA10G0125400 OB10G24630 BRADI1G77990 OS03G0108300 (BGIOSGA011601) LOC_Os03g01800 ORGLA03G0004400 OB03G10660 SB01G050070 (Sb01g050070) GRMZM2G388684 Si038925m.g AC205537.3_FG005 GRMZM2G028001 GRMZM2G143202 SB01G030050 (Sb01g030050) Si035021m.g BRADI3G32690 OS10G0546600 (BGIOSGA033404) LOC_Os10g39930 ORGLA10G0126500 OB10G24710 GLYMA10G07210 GLYMA13G21110 CYP97C4 (POPTR_0006s12150) Vv08s0007g04530 CYP97C4 (POPTR_0006s12150) AC205537.3_FG003 GRMZM2G046848 OS10G0548300 (BGIOSGA031460) LOC_Os10g40060 ORGLA10G0127900 GSMUA_Achr8G11510_001 BRADI3G32787 BRADI3G32800 OS10G0548700 (BGIOSGA031459) OSJNBA0082M15.19 (BGIOSGA031457) LOC_Os10g40100 ORGLA10G0128200 ORGLA10G0128400 OB10G24840 GRMZM2G090100 SB01G030070 (Sb01g030070) Si034014m.g BRADI3G32660 OS10G0546300 (BGIOSGA033403) LOC_Os10g39910 ORGLA10G0126300 OB10G24690 GRMZM2G019430 GRMZM2G132144 GRMZM2G117804 SB01G029920 (Sb01g029920) GRMZM2G141254 GRMZM2G398825 SB01G029925 (Sb01g029925) Si033941m.g BRADI3G32780 OsI_34556 (BGIOSGA031461) LOC_Os10g40050 ORGLA10G0127800 OB10G24790 GRMZM2G304132 SB01G029930 (Sb01g029930) Si038681m.g BRADI3G32770 OSJNBA0082M15.6 (BGIOSGA031462) LOC_Os10g40040 ORGLA10G0127700