Genomicus v16.03 - PhyloView of PHYA (AT1G09570) since Magnoliophyta

Reference Gene Name: PHYA (AT1G09570) Ensembl

Phytozome

Tair

Reference Species : Arabidopsis thaliana Plantlist

Tropicos

Root Species : Magnoliophyta (~163 million years)Tropicos

×2 ÷2

A more recent version of genomicus is available here

Magnoliophyta duplication node (click to collapse) Magnoliophyta (~163 My ago) Magnoliophyta duplication node (click to collapse) Magnoliophyta speciation node (click to collapse) Magnoliophyta (~163 My ago) Dicotyledones speciation node (click to collapse) Dicotyledones (~110 My ago) rosids speciation node (click to collapse) rosids (~110 My ago) - block_23 TreeBeST000017.D.a.b TreeBeST001008.B.a.a.a.b TreeBeST005789 TreeBeST002449.B TreeBeST000711.B.a.b.b.b.a.b.b.b.b.b TreeBeST000692.K TreeBeST001409.A.a TreeBeST000345.B.a TreeBeST000602.P TreeBeST000322.J TreeBeST001312.D TreeBeST007403 TreeBeST008171 TreeBeST006618 TreeBeST000501.E TreeBeST008792.J TreeBeST001418.B.a TreeBeST000800.K eurosids speciation node (click to collapse) eurosids (~107 My ago) - block_19 TreeBeST001008.B.a.a.a.b TreeBeST005789 TreeBeST000407.G TreeBeST002449.B TreeBeST000711.B.a.b.b.b.a.b.b.b.b.b TreeBeST000692.K TreeBeST001409.A.a TreeBeST000345.B.a TreeBeST000602.P TreeBeST000322.J TreeBeST001312.D TreeBeST007403.b TreeBeST007403.a.a TreeBeST008171 TreeBeST006618 TreeBeST000501.E TreeBeST008792.J TreeBeST000164.F TreeBeST008837.G Anc arath cacao speciation node (click to collapse) Anc arath cacao (~90 My ago) - block_7 TreeBeST008806.D TreeBeST008806.E.a TreeBeST008806.G.b.a TreeBeST008806.G.b.b.a.a TreeBeST008792.J TreeBeST000501.E TreeBeST006618 TreeBeST007403.a.b TreeBeST007403.b TreeBeST000602.P TreeBeST008803.N TreeBeST000692.I TreeBeST004966.b TreeBeST002449.B TreeBeST000407.G TreeBeST002650.B TreeBeST000404.Y.a.a.b Brassicales speciation node (click to collapse) Brassicales - block_176 TreeBeST002650.B TreeBeST002449.B TreeBeST004966.b TreeBeST001409.A.a TreeBeST003756.A.b.b.b.b.b.c TreeBeST000345.B.a TreeBeST000602.P TreeBeST007403.b Brassicaceae speciation node (click to collapse) Brassicaceae (~16 My ago) - block_1 TreeBeST008318 TreeBeST000743.C TreeBeST003756.A.b.b.b.b.a.a TreeBeST008586.B.b.b.b.b.b.b.b.a.a TreeBeST000658.G.a TreeBeST004843.k TreeBeST000257.L.a.a.c Camelineae speciation node (click to collapse) Camelineae - block_9 TreeBeST004843.k TreeBeST000658.G.a TreeBeST003756.A.b.b.b.b.a.a TreeBeST000743.C TreeBeST008318 Arabidopsis speciation node (click to collapse) Arabidopsis (~5 My ago) - block_1 TreeBeST000743.C TreeBeST008830.H.a Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:1 Arabidopsis lyrata subsp lyrata terminal node Arabidopsis lyrata subsp lyrata - Chr:1 471034 (fgenesh2_kg.1__988__AT1G09420.1) 471071 (fgenesh2_kg.1__1025__AT1G09700.1) Capsella rubella terminal node Capsella rubella - scaffold_1 Carubv10010860m.g Carubv10011205m.g Carubv10011324m.g Carubv10008488m.g Carubv10009604m.g Carubv10010985m.g Brassiceae speciation node (click to collapse) Brassiceae - block_1 TreeBeST004843.k TreeBeST000658.G.a TreeBeST008586.B.b.b.b.b.b.b.b.a.a TreeBeST003756.A.b.b.b.b.a.a TreeBeST000743.C TreeBeST008318 Eutremeae speciation node (click to collapse) Eutremeae - block_2 TreeBeST000366.C TreeBeST005708.B TreeBeST003650.B.a TreeBeST006776 TreeBeST000247.N.e TreeBeST002406.B.g TreeBeST003073.A.a.b.e.a TreeBeST003884.b TreeBeST008681.E.b TreeBeST008842.P TreeBeST000531.A.b.b TreeBeST000257.L.a.a.c TreeBeST004843.k TreeBeST000658.G.a TreeBeST008586.B.b.b.b.b.b.b.b.a.a TreeBeST008716.O.a.a.a.d TreeBeST001214.M.a TreeBeST002789.C.b Thellungiella parvula terminal node Thellungiella parvula - Chr:ch1-1 Tp1g08020 Tp1g08030 Tp1g08150 Tp1g08210 Tp1g08290 Tp1g08300 Tp1g08310 Tp1g08320 Thellungiella halophila terminal node Thellungiella halophila - scaffold_5 Thhalv10009464m.g Thhalv10009442m.g Thhalv10006949m.g Thhalv10009254m.g Thhalv10007777m.g Thhalv10007053m.g Thhalv10009352m.g Thhalv10007968m.g Brassica rapa subsp pekinensis duplication node (click to collapse) Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A06 Bra020028 (Bra020028) Bra020027 (Bra020027) Bra020026 (Bra020026) Bra020025 (Bra020025) Bra020012 (Bra020012) Bra019999 (Bra019999) Bra019998 (Bra019998) Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A09 Bra031687 (Bra031687) Bra031686 (Bra031686) Bra031685 (Bra031685) Bra031684 (Bra031684) Bra031683 (Bra031683) Bra031681 (Bra031681) Bra031680 (Bra031680) Bra031679 (Bra031679) Bra031677 (Bra031677) Bra031670 (Bra031670) Bra031664 (Bra031664) Bra031663 (Bra031663) Bra031662 (Bra031662) Bra031661 (Bra031661) Bra031660 (Bra031660) Bra031659 (Bra031659) Bra031658 (Bra031658) Bra031657 (Bra031657) Carica papaya terminal node Carica papaya - Chr:supercontig_48 evm.TU.supercontig_48.216 evm.TU.supercontig_48.221 evm.TU.supercontig_48.222 evm.TU.supercontig_48.223 evm.TU.supercontig_48.224 evm.TU.supercontig_48.225 evm.TU.supercontig_48.226 evm.TU.supercontig_48.227 evm.TU.supercontig_48.228 evm.TU.supercontig_48.229 evm.TU.supercontig_48.232 evm.TU.supercontig_48.233 evm.TU.supercontig_48.234 evm.TU.supercontig_48.235 evm.TU.supercontig_48.236 Theobroma cacao terminal node Theobroma cacao - Chr:Tc05 Tc05_g031770 Tc05_g031780 Tc05_g031790 Tc05_g031800 Tc05_g031810 Tc05_g031840 Tc05_g031850 Tc05_g031860 Tc05_g031870 Tc05_g031871 Tc05_g031872 Tc05_g031910 Tc05_g031911 Tc05_g031920 Tc05_g031930 Tc05_g031940 Tc05_g031950 Tc05_g031960 Tc05_g031970 Tc05_g031971 Tc05_g031972 Tc05_g031973 Tc05_g031980 Tc05_g031990 Tc05_g032000 Tc05_g032010 fabids speciation node (click to collapse) fabids (~100 My ago) - block_93 TreeBeST001409.A.a TreeBeST000345.B.a TreeBeST001312.D TreeBeST007403.b TreeBeST007403.a.a TreeBeST008171 Populus trichocarpa terminal node Populus trichocarpa - Chr:13 POPTRDRAFT_662504 (POPTR_0013s00200) POPTRDRAFT_570638 (POPTR_0013s00210) POPTRDRAFT_240151 (POPTR_0013s00230) POPTRDRAFT_823553 (POPTR_0013s00250) POPTR_0013s00260 POPTR_0013s00270 POPTRDRAFT_570648 (POPTR_0013s00300) XM_002319416.1 (POPTR_0013s00320) POPTR_0013s00330 POPTRDRAFT_570651 (POPTR_0013s00340) POPTRDRAFT_240188 (POPTR_0013s00350) POPTRDRAFT_570653 (POPTR_0013s00360) POPTRDRAFT_570654 (POPTR_0013s00370) Leguminosae speciation node (click to collapse) Leguminosae (~97 My ago) - block_122 TreeBeST001409.A.a TreeBeST000345.B.a TreeBeST001312.D TreeBeST007403.b Papilionoideae duplication node (click to collapse) Papilionoideae speciation node (click to collapse) Glycine max duplication node (click to collapse) Glycine max terminal node Glycine max - Chr:Gm03 GLYMA03G38460 GLYMA03G38480 GMA.32200 (GLYMA03G38490) GLYMA03G38500 GLYMA03G38510 GLYMA03G38520 GLYMA03G38530 GLYMA03G38540 GLYMA03G38550 GLYMA03G38560 GLYMA03G38570 GLYMA03G38581 GLYMA03G38591 GLYMA03G38600 GLYMA03G38610 GLYMA03G38640 GLYMA03G38690 GLYMA03G38701 GLYMA03G38711 GLYMA03G38720 GLYMA03G38730 GLYMA03G38740 GLYMA03G38750 GLYMA03G38760 Glycine max terminal node Glycine max - Chr:Gm19 GLYMA19G41060 GLYMA19G41080 GLYMA19G41090 GLYMA19G41100 GLYMA19G41111 GLYMA19G41120 GLYMA19G41130 GLYMA19G41141 GLYMA19G41150 GLYMA19G41160 GLYMA19G41171 GLYMA19G41181 GLYMA19G41190 GLYMA19G41200 GLYMA19G41230 GLYMA19G41270 GLYMA19G41275 GLYMA19G41280 GLYMA19G41287 GLYMA19G41294 GLYMA19G41302 GLYMA19G41310 SOYAP2 (GLYMA19G41320) GLYMA19G41330 GLYMA19G41350 Papilionoideae speciation node (click to collapse) Papilionoideae (~60 My ago) - block_229 TreeBeST008792.J.d TreeBeST000501.E.h TreeBeST006618.d TreeBeST008171 TreeBeST001312.D TreeBeST000602.P TreeBeST000345.B.a.d TreeBeST002650.B.b TreeBeST000404.Y.a.a.b TreeBeST006561.a TreeBeST001008.B.a.a.a.b Glycine max duplication node (click to collapse) Glycine max terminal node Glycine max - Chr:Gm10 GMA.12486 (GLYMA10G28030) GLYMA10G28035 GLYMA10G28040 GLYMA10G28051 GLYMA10G28060 GLYMA10G28070 GLYMA10G28075 GLYMA10G28080 GLYMA10G28091 GLYMA10G28100 GLYMA10G28110 GLYMA10G28130 GLYMA10G28140 GLYMA10G28150 GLYMA10G28180 FEN1 (GLYMA10G28200) GLYMA10G28211 GLYMA10G28220 GLYMA10G28240 GLYMA10G28265 GLYMA10G28260 GLYMA10G28270 GLYMA10G28300 GLYMA10G28310 GLYMA10G28320 Glycine max terminal node Glycine max - Chr:Gm20 GLYMA20G21970 GLYMA20G21983 GLYMA20G21996 GLYMA20G22010 GLYMA20G22020 GLYMA20G22030 GLYMA20G22040 GLYMA20G22050 GLYMA20G22070 GLYMA20G22090 GLYMA20G22110 GLYMA20G22120 GLYMA20G22130 GLYMA20G22140 GLYMA20G22150 GLYMA20G22170 GLYMA20G22190 GLYMA20G22200 GLYMA20G22240 GLYMA20G22255 GLYMA20G22270 GLYMA20G22311 GLYMA20G22331 GLYMA20G22351 GLYMA20G22370 GLYMA20G22380 Lotus japonicus terminal node Lotus japonicus - Chr:chr5.CM0048 chr5.CM0048.40.r2.d chr5.CM0048.50.r2.d chr5.CM0048.70.r2.d chr5.CM0048.90.r2.d chr5.CM0048.100.r2.d chr5.CM0048.110.r2.d chr5.CM0048.140.r2.m chr5.CM0048.160.r2.m chr5.CM0048.170.r2.m chr5.CM0048.180.r2.m chr5.CM0048.190.r2.m chr5.CM0048.240.r2.m chr5.CM0048.250.r2.m chr5.CM0048.260.r2.m chr5.CM0048.280.r2.m chr5.CM0048.330.r2.d chr5.CM0048.340.r2.d chr5.CM0048.350.r2.d chr5.CM0048.360.r2.d chr5.CM0048.380.r2.d chr5.CM0048.390.r2.d chr5.CM0048.400.r2.d chr5.CM0048.410.r2.d chr5.CM0048.430.r2.d Rosaceae speciation node (click to collapse) Rosaceae - block_11 TreeBeST002650.B TreeBeST005789 TreeBeST000407.G TreeBeST002449.B TreeBeST004966.b TreeBeST001409.A.a TreeBeST003756.A.b.b.b.b.b TreeBeST000345.B.a TreeBeST000602.P TreeBeST000322.J TreeBeST007403.a.a TreeBeST008171 TreeBeST007403.a.b TreeBeST006618 TreeBeST000501.E TreeBeST008792.J Prunus persica terminal node Prunus persica - scaffold_6 ppa007447m.g ppa001546m.g ppa002860m.g ppa000924m.g ppa000992m.g ppa018586m.g ppa000921m.g ppa025198m.g ppa008917m.g ppa001778m.g ppa006241m.g ppa025329m.g ppa021623m.g ppa021432m.g ppa012278m.g ppa017094m.g ppa007475m.g ppa018162m.g ppb014879m.g ppa006114m.g ppa013857m.g ppa014548m.g ppa021267m.g ppa022799m.g ppa019749m.g ppa020330m.g Fragaria vesca terminal node Fragaria vesca - Chr:LG6 gene00293-v1.0-hybrid gene00294-v1.0-hybrid gene00295-v1.0-hybrid gene00296-v1.0-hybrid gene00297-v1.0-hybrid gene00298-v1.0-hybrid gene00299-v1.0-hybrid gene00253-v1.0-hybrid gene22941-v1.0-hybrid gene22942-v1.0-hybrid gene22943-v1.0-hybrid gene22944-v1.0-hybrid gene22945-v1.0-hybrid gene22946-v1.0-hybrid gene22947-v1.0-hybrid gene22952-v1.0-hybrid gene22953-v1.0-hybrid gene22954-v1.0-hybrid gene33989-v1.0-hybrid gene22955-v1.0-hybrid gene22956-v1.0-hybrid gene22957-v1.0-hybrid gene22958-v1.0-hybrid gene22959-v1.0-hybrid gene22960-v1.0-hybrid gene33990-v1.0-hybrid Vitis vinifera terminal node Vitis vinifera - Chr:14 Vv14s0060g00010 Vv14s0060g00040 Vv14s0060g00050 Vv14s0060g00060 Vv14s0060g00070 Vv14s0060g00080 Vv14s0060g00090 Vv14s0060g00110 Vv14s0060g00150 Vv14s0060g00160 Vv14s0060g00170 Vv14s0060g00200 Vv14s0060g00210 Vv14s0060g00220 Vv14s0060g00250 Vv14s0060g00270 Vv14s0060g00280 Vv14s0060g00290 Solanum speciation node (click to collapse) Solanum (~3 My ago) - block_312 Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch10 PGSC0003DMG400009752 (PGSC0003DMG400009752) PGSC0003DMG400009754 (PGSC0003DMG400009754) PGSC0003DMG400009753 (PGSC0003DMG400009753) PGSC0003DMG400044702 (PGSC0003DMG400044702) PGSC0003DMG400018974 (PGSC0003DMG400018974) PGSC0003DMG400018975 (PGSC0003DMG400018975) PGSC0003DMG400018978 (PGSC0003DMG400018978) PGSC0003DMG400044506 (PGSC0003DMG400044506) PGSC0003DMG400046613 (PGSC0003DMG400046613) PGSC0003DMG400018977 (PGSC0003DMG400018977) PGSC0003DMG400047089 (PGSC0003DMG400047089) PGSC0003DMG400042286 (PGSC0003DMG400042286) PGSC0003DMG400046994 (PGSC0003DMG400046994) PGSC0003DMG400044675 (PGSC0003DMG400044675) PGSC0003DMG400036134 (PGSC0003DMG400036134) PGSC0003DMG400039246 (PGSC0003DMG400039246) PGSC0003DMG400040719 (PGSC0003DMG400040719) PGSC0003DMG400004327 (PGSC0003DMG400004327) PGSC0003DMG400004326 (PGSC0003DMG400004326) PGSC0003DMG400036106 (PGSC0003DMG400036106) PGSC0003DMG400037003 (PGSC0003DMG400037003) PGSC0003DMG400040476 (PGSC0003DMG400040476) PGSC0003DMG400040181 (PGSC0003DMG400040181) PGSC0003DMG400004325 (PGSC0003DMG400004325) PGSC0003DMG400004329 (PGSC0003DMG400004329) PGSC0003DMG400004324 (PGSC0003DMG400004324) PGSC0003DMG400004328 (PGSC0003DMG400004328) PGSC0003DMG400046320 (PGSC0003DMG400046320) PGSC0003DMG400011765 (PGSC0003DMG400011765) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:10 Solyc10g044490.1 Solyc10g044500.1 Solyc10g044510.1 SEND33 (Solyc10g044520.1) Solyc10g044530.1 Solyc10g044540.1 Solyc10g044550.1 Solyc10g044560.1 Solyc10g044580.1 Solyc10g044600.1 Solyc10g044610.1 Solyc10g044620.1 Solyc10g044630.1 Solyc10g044640.1 Solyc10g044660.1 Solyc10g044690.1 Solyc10g044700.1 Solyc10g044710.1 Solyc10g044720.1 Solyc10g044730.1 Solyc10g044740.1 Solyc10g044750.1 Solyc10g044770.1 Solyc10g044780.1 Solyc10g044790.1 Solyc10g044800.1 Solyc10g044810.1 Solyc10g044820.1 Solyc10g044830.1 Commelinids speciation node (click to collapse) Commelinids (~100 My ago) Musa acuminata subsp malaccensis duplication node (click to collapse) Musa acuminata subsp malaccensis terminal node Musa acuminata subsp malaccensis - Chr:5 GSMUA_Achr5G27160_001 GSMUA_Achr5G27170_001 GSMUA_Achr5G27180_001 GSMUA_Achr5G27190_001 GSMUA_Achr5G27200_001 GSMUA_Achr5G27210_001 GSMUA_Achr5G27220_001 GSMUA_Achr5G27230_001 GSMUA_Achr5G27240_001 GSMUA_Achr5G27250_001 GSMUA_Achr5G27260_001 GSMUA_Achr5G27270_001 GSMUA_Achr5G27280_001 GSMUA_Achr5G27290_001 GSMUA_Achr5G27300_001 GSMUA_Achr5G27320_001 GSMUA_Achr5G27330_001 GSMUA_Achr5G27340_001 GSMUA_Achr5G27350_001 GSMUA_Achr5G27360_001 GSMUA_Achr5G27370_001 GSMUA_Achr5G27380_001 GSMUA_Achr5G27390_001 GSMUA_Achr5G27400_001 GSMUA_Achr5G27410_001 GSMUA_Achr5G27420_001 GSMUA_Achr5G27430_001 GSMUA_Achr5G27440_001 GSMUA_Achr5G27450_001 GSMUA_Achr5G27460_001 Musa acuminata subsp malaccensis terminal node Musa acuminata subsp malaccensis - Chr:8 GSMUA_Achr8G05980_001 GSMUA_Achr8G05990_001 GSMUA_Achr8G06000_001 GSMUA_Achr8G06010_001 GSMUA_Achr8G06020_001 GSMUA_Achr8G06030_001 GSMUA_Achr8G06040_001 GSMUA_Achr8G06050_001 GSMUA_Achr8G06060_001 GSMUA_Achr8G06070_001 GSMUA_Achr8G06080_001 GSMUA_Achr8G06090_001 GSMUA_Achr8G06100_001 GSMUA_Achr8G06110_001 GSMUA_Achr8G06120_001 GSMUA_Achr8G06140_001 GSMUA_Achr8G06150_001 GSMUA_Achr8G06160_001 GSMUA_Achr8G06170_001 GSMUA_Achr8G06180_001 GSMUA_Achr8G06190_001 GSMUA_Achr8G06200_001 GSMUA_Achr8G06220_001 GSMUA_Achr8G06230_001 GSMUA_Achr8G06240_001 GSMUA_Achr8G06250_001 GSMUA_Achr8G06260_001 GSMUA_Achr8G06270_001 GSMUA_Achr8G06280_001 Poaceae duplication node (click to collapse) Poaceae duplication node (click to collapse) Poaceae speciation node (click to collapse) Poaceae (~41 My ago) - block_8 TreeBeST006361 TreeBeST009511.N TreeBeST002848.b TreeBeST008755.J.c.a TreeBeST009538.R TreeBeST000915.K.a TreeBeST002593.A TreeBeST009531.J.b.a EPlGT00140000000990.C TreeBeST003780 TreeBeST001179.C.c TreeBeST009552.Q TreeBeST000662.U.a TreeBeST008609.M TreeBeST000434.H.j.a.a TreeBeST000010.Y.a TreeBeST000010.Y.b TreeBeST000093.A TreeBeST003219.B.c TreeBeST000327.L.a TreeBeST008835.C.f.a.a.a.b.a.a.a.a TreeBeST004420 TreeBeST000060.X TreeBeST008685.O.a TreeBeST001237.E.j TreeBeST001425.B TreeBeST000013.K.e.b TreeBeST000801.C TreeBeST000612.E TreeBeST001254.A BEP clade speciation node (click to collapse) BEP clade (~40 My ago) - block_7 TreeBeST001254.A TreeBeST000612.E TreeBeST000801.C TreeBeST000013.K.e.b TreeBeST001425.B TreeBeST001237.E.j TreeBeST008685.O.a TreeBeST000060.X TreeBeST004420 TreeBeST008835.C.f.a.a.a.b.a.a.a.a TreeBeST000327.L.a TreeBeST003219.B.c TreeBeST000093.A TreeBeST000010.Y.b TreeBeST000010.Y.a TreeBeST000434.H.j.a.a TreeBeST008609.M TreeBeST000662.U.a TreeBeST009552.Q TreeBeST003201.F TreeBeST001179.C.c TreeBeST003780 EPlGT00140000000990.C TreeBeST009531.J.b.a TreeBeST002593.A TreeBeST000915.K.a TreeBeST009538.R TreeBeST008755.J.c.a TreeBeST002848.b TreeBeST009511.N Pooideae duplication node (click to collapse) Pooideae speciation node (click to collapse) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:1 BRADI1G10360 BRADI1G10370 BRADI1G10380 BRADI1G10390 BRADI1G10400 BRADI1G10410 BRADI1G10420 BRADI1G10430 BRADI1G10440 BRADI1G10447 BRADI1G10460 BRADI1G10470 BRADI1G10480 BRADI1G10490 BRADI1G10500 BRADI1G10530 BRADI1G10540 BRADI1G10550 BRADI1G10560 BRADI1G10567 BRADI1G10580 BRADI1G10590 BRADI1G10600 BRADI1G10610 BRADI1G10620 BRADI1G10630 BRADI1G10640 BRADI1G10650 BRADI1G10660 Pooideae speciation node (click to collapse) Pooideae - block_52 TreeBeST006361 TreeBeST009511.N TreeBeST002848.b TreeBeST008755.J.c.a TreeBeST009538.R.i TreeBeST000915.K.a TreeBeST002593.A EPlGT00140000000990.C TreeBeST003780 TreeBeST001179.C.c TreeBeST003201.F TreeBeST009552.Q TreeBeST000662.U.a TreeBeST008609.M TreeBeST000434.H.j.a.a TreeBeST000010.Y.a TreeBeST000093.A TreeBeST003219.B.c TreeBeST000327.L.a TreeBeST008835.C.f.a.a.a.b.a.a.a.a TreeBeST004420 TreeBeST008685.O.a TreeBeST001425.B TreeBeST000013.K.e.b TreeBeST000801.C TreeBeST001254.A TreeBeST002325.D TreeBeST003575.E TreeBeST001141.F Brachypodium distachyon terminal node Brachypodium distachyon - Chr:1 BRADI1G10370 BRADI1G10380 BRADI1G10390 BRADI1G10400 BRADI1G10410 BRADI1G10420 BRADI1G10430 BRADI1G10440 BRADI1G10447 BRADI1G10460 BRADI1G10470 BRADI1G10480 BRADI1G10490 BRADI1G10500 BRADI1G10530 BRADI1G10540 BRADI1G10550 BRADI1G10560 BRADI1G10567 BRADI1G10580 BRADI1G10590 BRADI1G10600 BRADI1G10610 BRADI1G10620 BRADI1G10630 BRADI1G10640 BRADI1G10650 BRADI1G10660 BRADI1G10670 Hordeum vulgare subsp vulgare terminal node Hordeum vulgare subsp vulgare - Chr:4 MLOC_81970 MLOC_36451 MLOC_52920 MLOC_10389 MLOC_54877 MLOC_72842 MLOC_75143 MLOC_13289 MLOC_74741 MLOC_72162 MLOC_21478 MLOC_36949 MLOC_70989 MLOC_70988 MLOC_55034 MLOC_44256 MLOC_59158 MLOC_59159 MLOC_66880 MLOC_68493 MLOC_68494 MLOC_63737 MLOC_63735 MLOC_63736 MLOC_70444 MLOC_64735 MLOC_57872 MLOC_70277 MLOC_74226 MLOC_57218 Oryza speciation node (click to collapse) Oryza (~40 My ago) - block_1 TreeBeST008755.J.c.a TreeBeST009538.R.k.a TreeBeST000915.K.a TreeBeST002593.A.g.a TreeBeST009531.J.b.a EPlGT00140000027073 EPlGT00140000000990.C EPlGT00140000023733 TreeBeST003780 TreeBeST001179.C.c TreeBeST003201.F TreeBeST009552.Q TreeBeST000662.U.a TreeBeST008609.M TreeBeST000434.H.j.a.a TreeBeST000010.Y.b TreeBeST000093.A TreeBeST003219.B.c EPlGT00140000023919 TreeBeST001616.E.b TreeBeST000327.L.a TreeBeST008835.C.f.a.a.a.b.a.a.a.a TreeBeST004420 TreeBeST000060.X TreeBeST008776.O.b.b.b TreeBeST008685.O.a TreeBeST001237.E.j TreeBeST001425.B TreeBeST000013.K.e.b TreeBeST003208.B.a.b Oryza sativa speciation node (click to collapse) Oryza sativa - block_9 TreeBeST009538.R.k.a TreeBeST000915.K.a TreeBeST002593.A.g.a TreeBeST009531.J.b.a EPlGT00140000027073 EPlGT00140000000990.C EPlGT00140000023733 TreeBeST003780 TreeBeST001179.C.c TreeBeST003201.F TreeBeST000884.E.h.b.a.a.b.a.a TreeBeST009552.Q TreeBeST000662.U.a TreeBeST008609.M TreeBeST000434.H.j.a.a TreeBeST000010.Y.b TreeBeST000093.A TreeBeST003219.B.c EPlGT00140000023919 TreeBeST001616.E.b TreeBeST000327.L.a TreeBeST008835.C.f.a.a.a.b.a.a.a.a TreeBeST004420 TreeBeST000060.X TreeBeST008776.O.b.b.b TreeBeST008685.O.a TreeBeST001237.E.j TreeBeST001425.B TreeBeST000013.K.e.b TreeBeST003208.B.a.b Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:3 OASB2 (BGIOSGA009914) BGIOSGA013463 OS03G0718200 (BGIOSGA009913) OS03G0718500 (BGIOSGA013464) OsJ_12365 (BGIOSGA009912) OS03G0718600 (BGIOSGA009911) B1377B10.1 (BGIOSGA013465) OS03G0719000 (BGIOSGA009910) OsI_13308 (BGIOSGA013466) B1377B10.4 (BGIOSGA013467) B1377B10.5 (BGIOSGA009909) OS03G0719400 (BGIOSGA009908) OsI_13312 (BGIOSGA013468) OsI_13313 (BGIOSGA013469) OS03G0719500 (BGIOSGA009907) B1377B10.9 (BGIOSGA009905) OSPTR1 (BGIOSGA009904) OsI_13318 (BGIOSGA009903) B1377B10.13 (BGIOSGA013470) OsI_13320 (BGIOSGA013471) OSJNBA0031O09.05 (BGIOSGA013472) OsI_13322 (BGIOSGA009902) OS03G0721200 (BGIOSGA013473) OSJNBA0031O09.02 (BGIOSGA009901) B1377B10.21 (BGIOSGA009900) B1377B10.22 (BGIOSGA013474) B1377B10.23 (BGIOSGA009899) OsI_13328 (BGIOSGA013475) NM_001057641.1 (BGIOSGA013476) OsI_13330 (BGIOSGA009898) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:3 LOC_Os03g50850 LOC_Os03g50860 LOC_Os03g50870 LOC_Os03g50880 LOC_Os03g50885 LOC_Os03g50900 LOC_Os03g50920 LOC_Os03g50940 LOC_Os03g50960 LOC_Os03g50970 LOC_Os03g50980 LOC_Os03g50990 LOC_Os03g51000 LOC_Os03g51010 LOC_Os03g51020 LOC_Os03g51040 LOC_Os03g51050 LOC_Os03g51060 LOC_Os03g51080 LOC_Os03g51090 LOC_Os03g51100 LOC_Os03g51110 LOC_Os03g51120 LOC_Os03g51140 LOC_Os03g51150 LOC_Os03g51160 LOC_Os03g51170 LOC_Os03g51180 LOC_Os03g51190 LOC_Os03g51200 Oryza glaberrima terminal node Oryza glaberrima - Chr:Oglab03_unplaced058 ORGLA03G0408600 ORGLA03G0408700 ORGLA03G0408800 ORGLA03G0408900 ORGLA03G0409000 ORGLA03G0409100 ORGLA03G0409200 ORGLA03G0409300 ORGLA03G0409400 ORGLA03G0409500 ORGLA03G0409600 ORGLA03G0409700 ORGLA03G0409800 ORGLA03G0409900 ORGLA03G0410000 ORGLA03G0410200 ORGLA03G0410300 ORGLA03G0410400 ORGLA03G0410500 ORGLA03G0410600 ORGLA03G0410700 ORGLA03G0410800 ORGLA03G0410900 ORGLA03G0411000 ORGLA03G0411100 ORGLA03G0411200 ORGLA03G0411300 ORGLA03G0411400 ORGLA03G0411500 ORGLA03G0411600 Oryza brachyantha terminal node Oryza brachyantha - Chr:3 OB03G39070 OB03G39080 OB03G39090 OB03G39100 OB03G39110 OB03G39120 OB03G39130 OB03G39140 OB03G39150 OB03G39160 OB03G39170 OB03G39180 OB03G39190 OB03G39200 OB03G39210 OB03G39230 OB03G39240 OB03G39250 OB03G39260 OB03G39270 OB03G39280 OB03G39290 OB03G39300 OB03G39310 OB03G39320 OB03G39330 OB03G39340 OB03G39350 OB03G39360 OB03G39370 Panicoideae speciation node (click to collapse) Panicoideae - block_1 TreeBeST009511.N TreeBeST002848.b TreeBeST008755.J.c.a TreeBeST009538.R.m TreeBeST000915.K.a TreeBeST002593.A TreeBeST009531.J.b.a EPlGT00140000000990.C TreeBeST003780 TreeBeST001179.C.c TreeBeST003201.E TreeBeST009552.Q.e TreeBeST000662.U.a TreeBeST008609.M TreeBeST000434.H.j.a.a TreeBeST000010.Y.a TreeBeST000010.Y.b TreeBeST000093.A TreeBeST003219.B.c TreeBeST000327.L.a TreeBeST008835.C.f.a.a.a.b.a.a.a.a TreeBeST004420 TreeBeST000060.X TreeBeST008685.O.a TreeBeST001237.E.j TreeBeST001425.B TreeBeST000013.K.e.b TreeBeST000801.C TreeBeST000612.E TreeBeST001254.A Andropogoneae duplication node (click to collapse) Andropogoneae speciation node (click to collapse) Andropogoneae (~9 My ago) - block_1 TreeBeST004671.A TreeBeST000013.K.e.b.a TreeBeST001425.B TreeBeST001237.E.j TreeBeST008685.O.a.a TreeBeST000060.X.c TreeBeST004420 TreeBeST008835.C.f.a.a.a.b.a.a.a.a TreeBeST000327.L.a TreeBeST003219.B.c TreeBeST000093.A.i TreeBeST000010.Y.b TreeBeST000093.A.j TreeBeST000010.Y.a TreeBeST000434.H.j.a.a TreeBeST008609.M.b TreeBeST008609.M.a TreeBeST000662.U.a TreeBeST009552.Q.e TreeBeST003201.E.a TreeBeST001179.C.c TreeBeST003780.f EPlGT00140000000990.C TreeBeST009531.J.b.a TreeBeST002593.A TreeBeST000915.K.a TreeBeST009538.R.m TreeBeST008755.J.c.a TreeBeST002848.b.a Sorghum bicolor duplication node (click to collapse) Sorghum bicolor terminal node Sorghum bicolor - Chr:1 SB01G009800 (Sb01g009800) SB01G009810 (Sb01g009810) SB01G009820 (Sb01g009820) SB01G009830 (Sb01g009830) SB01G009835 (Sb01g009835) SB01G009840 (Sb01g009840) SB01G009850 (Sb01g009850) SB01G009860 (Sb01g009860) SB01G009863 (Sb01g009863) SB01G009866 (Sb01g009866) SB01G009870 (Sb01g009870) SB01G009880 (Sb01g009880) SB01G009890 (Sb01g009890) SB01G009900 (Sb01g009900) SB01G009910 (Sb01g009910) SB01G009933 (Sb01g009933) SB01G009936 (Sb01g009936) SB01G009940 (Sb01g009940) SB01G009950 (Sb01g009950) SB01G009960 (Sb01g009960) SB01G009965 (Sb01g009965) SB01G009970 (Sb01g009970) SB01G009980 (Sb01g009980) SB01G009990 (Sb01g009990) SB01G009995 (Sb01g009995) SB01G010000 (Sb01g010000) SB01G010010 (Sb01g010010) SB01G010020 (Sb01g010020) SB01G010025 (Sb01g010025) Sorghum bicolor terminal node Sorghum bicolor - Chr:1 SB01G009810 (Sb01g009810) SB01G009820 (Sb01g009820) SB01G009830 (Sb01g009830) SB01G009835 (Sb01g009835) SB01G009840 (Sb01g009840) SB01G009850 (Sb01g009850) SB01G009860 (Sb01g009860) SB01G009863 (Sb01g009863) SB01G009866 (Sb01g009866) SB01G009870 (Sb01g009870) SB01G009880 (Sb01g009880) SB01G009890 (Sb01g009890) SB01G009900 (Sb01g009900) SB01G009910 (Sb01g009910) SB01G009933 (Sb01g009933) SB01G009936 (Sb01g009936) SB01G009940 (Sb01g009940) SB01G009950 (Sb01g009950) SB01G009960 (Sb01g009960) SB01G009965 (Sb01g009965) SB01G009970 (Sb01g009970) SB01G009980 (Sb01g009980) SB01G009990 (Sb01g009990) SB01G009995 (Sb01g009995) SB01G010000 (Sb01g010000) SB01G010010 (Sb01g010010) SB01G010020 (Sb01g010020) SB01G010025 (Sb01g010025) AC1 (Sb01g010030) Zea mays duplication node (click to collapse) Zea mays terminal node Zea mays - Chr:8 GRMZM2G119226 GRMZM2G088112 GRMZM2G388574 AC215311.3_FG002 GRMZM2G175398 GRMZM5G859431 GRMZM2G440803 GRMZM2G440820 GRMZM2G440855 GRMZM2G424682 GRMZM2G444567 GRMZM2G148156 AC203531.3_FG002 GRMZM2G095964 GRMZM2G111898 GRMZM2G111948 GRMZM2G120536 GRMZM2G127958 GRMZM2G127972 GRMZM2G081892 GRMZM2G407273 WIP1 (GRMZM2G156632) GRMZM2G156708 GRMZM2G156713 GRMZM2G456830 GRMZM2G450206 GRMZM2G450217 GRMZM2G450228 GRMZM2G131994 CRS2 (GRMZM2G132021) Zea mays terminal node Zea mays - Chr:5 GRMZM5G896650 GRMZM2G096591 GRMZM5G897022 GRMZM5G878347 GRMZM2G046055 GRMZM2G046050 GRMZM2G045955 AC216052.3_FG008 GRMZM2G045941 GRMZM2G045690 AC216052.3_FG004 GRMZM2G093139 GRMZM2G181000 GRMZM2G181002 GRMZM5G813740 GRMZM2G481305 GRMZM5G829476 GRMZM2G455869 GRMZM2G455874 GRMZM2G425236 GRMZM2G152328 GRMZM2G152548 GRMZM5G833140 GRMZM2G459543 AC209072.3_FG001 GRMZM2G131080 GRMZM2G158359 GRMZM2G408897 GRMZM5G859049 AC209072.3_FG011 Andropogoneae speciation node (click to collapse) Zea mays terminal node Zea mays - Chr:1 ZmHK1b1 (GRMZM2G155767) GRMZM2G046849 GRMZM2G046966 GRMZM2G511542 GRMZM2G348349 GRMZM2G047055 GRMZM2G423423 GRMZM2G059981 GRMZM2G059964 GRMZM2G359929 GRMZM2G518427 GRMZM2G073912 GRMZM5G863645 GRMZM5G865188 GRMZM2G015073 GRMZM5G867390 GRMZM2G050081 GRMZM5G862643 GRMZM5G813124 GRMZM2G349035 GRMZM2G583462 GRMZM5G826838 GRMZM5G848720 GRMZM5G825695 GRMZM2G423634 GRMZM2G556330 AC231640.1_FG009 GRMZM2G412814 GRMZM2G412793 GRMZM5G809482 Setaria italica terminal node Setaria italica - scaffold_9 Si035411m.g Si035791m.g Si034255m.g Si034136m.g Si039561m.g Si037973m.g Si039354m.g Si036818m.g Si040744m.g Si034811m.g Si039987m.g Si037256m.g Si036070m.g Si034833m.g Si036340m.g Si040351m.g Si038786m.g Si038436m.g Si040517m.g Si033999m.g Si036077m.g Si034805m.g Si038211m.g Si035144m.g Si040754m.g Si034686m.g Si038564m.g Si036975m.g Si040760m.g Si036200m.g Poaceae speciation node (click to collapse) Panicoideae speciation node (click to collapse) Setaria italica terminal node Setaria italica - scaffold_8 Si026652m.g Si027812m.g Si027906m.g Si027575m.g Si026986m.g Si027223m.g Si028634m.g Si026646m.g Si026572m.g Si028136m.g Si026570m.g Si026470m.g Si028167m.g Si025907m.g Si028279m.g Si027060m.g Si025997m.g Si028592m.g Si027974m.g Si025900m.g Si028139m.g Si028028m.g Si028610m.g Si027886m.g Si027198m.g Si026819m.g Si027019m.g Si026053m.g Si026215m.g Si025861m.g Poaceae speciation node (click to collapse) Panicoideae speciation node (click to collapse) Andropogoneae speciation node (click to collapse) Zea mays terminal node Zea mays - Chr:1 GRMZM2G552644 GRMZM2G417496 AC211222.2_FG001 GRMZM5G876602 GRMZM2G060943 GRMZM2G090657 AC211940.4_FG001 GRMZM2G002109 GRMZM2G002138 GRMZM2G002143 AC186525.4_FG005 bsd2 (GRMZM2G062788) AC199540.3_FG003 GRMZM2G062777 GRMZM2G088490 GRMZM2G179844 GRMZM5G832908 GRMZM2G480451 GRMZM2G129486 GRMZM2G560077 AC214634.3_FG003 GRMZM2G429807 GRMZM2G429759 GRMZM5G843186 GRMZM2G407382 AC186518.3_FG003 GRMZM2G179138 GRMZM2G179121 GRMZM2G179118 Magnoliophyta speciation node (click to collapse) Magnoliophyta (~163 My ago) - block_210 TreeBeST005411 Dicotyledones speciation node (click to collapse) Dicotyledones (~110 My ago) - block_39 TreeBeST008748.F.a TreeBeST000733.C.b TreeBeST008819.T TreeBeST000172.O TreeBeST005795 TreeBeST000858.C TreeBeST001153.D.c.b TreeBeST000663.I TreeBeST008777.M.a.b TreeBeST001111.A TreeBeST005816 TreeBeST005969 TreeBeST001150.B TreeBeST005411 TreeBeST008750.C.b.b TreeBeST005529.C TreeBeST002776.B TreeBeST006863 TreeBeST008095 TreeBeST002894.A TreeBeST000122.Z TreeBeST003772 TreeBeST000013.I TreeBeST001155.D.a TreeBeST000271.FB TreeBeST007016.B TreeBeST008594.M TreeBeST005168.a Solanum speciation node (click to collapse) Solanum (~3 My ago) - block_6 TreeBeST000858.C TreeBeST006323.a TreeBeST003309.A.a TreeBeST001153.D.c.b TreeBeST000663.I.b TreeBeST004418.a.b TreeBeST008610.A.b TreeBeST004012 EPlGT00160000041213 TreeBeST008777.M.a.b TreeBeST001111.A.a.b TreeBeST008872.A.a.a.a.b TreeBeST005969 TreeBeST001150.B TreeBeST005411 TreeBeST008803.F.a TreeBeST008750.C.b.b TreeBeST005529.C TreeBeST000743.E TreeBeST008929.GB TreeBeST004407.A TreeBeST002894.A.c TreeBeST000122.Z.a TreeBeST003772 TreeBeST003491.a EPlGT00140000027504.A TreeBeST000013.I TreeBeST001155.D.a.b Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch07 PGSC0003DMG402017380 (PGSC0003DMG402017380) PGSC0003DMG401017380 (PGSC0003DMG401017380) PGSC0003DMG400017379 (PGSC0003DMG400017379) PGSC0003DMG400017378 (PGSC0003DMG400017378) PGSC0003DMG400035925 (PGSC0003DMG400035925) PGSC0003DMG400034984 (PGSC0003DMG400034984) PGSC0003DMG400017403 (PGSC0003DMG400017403) PGSC0003DMG400017402 (PGSC0003DMG400017402) PGSC0003DMG400017401 (PGSC0003DMG400017401) PGSC0003DMG400017400 (PGSC0003DMG400017400) PGSC0003DMG400017399 (PGSC0003DMG400017399) PGSC0003DMG400017376 (PGSC0003DMG400017376) PGSC0003DMG400017375 (PGSC0003DMG400017375) PGSC0003DMG400017398 (PGSC0003DMG400017398) PGSC0003DMG400017397 (PGSC0003DMG400017397) PGSC0003DMG400017374 (PGSC0003DMG400017374) PGSC0003DMG400017373 (PGSC0003DMG400017373) PGSC0003DMG400017394 (PGSC0003DMG400017394) PGSC0003DMG400017370 (PGSC0003DMG400017370) PGSC0003DMG400036924 (PGSC0003DMG400036924) PGSC0003DMG400017393 (PGSC0003DMG400017393) PGSC0003DMG400017369 (PGSC0003DMG400017369) PGSC0003DMG400017368 (PGSC0003DMG400017368) PGSC0003DMG400037166 (PGSC0003DMG400037166) PGSC0003DMG400029184 (PGSC0003DMG400029184) PGSC0003DMG400029180 (PGSC0003DMG400029180) PGSC0003DMG400029183 (PGSC0003DMG400029183) PGSC0003DMG402029181 (PGSC0003DMG402029181) PGSC0003DMG400029182 (PGSC0003DMG400029182) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:7 Solyc07g045320.2 Solyc07g045330.2 Solyc07g045340.2 Solyc07g045350.2 Solyc07g045370.2 Solyc07g045380.2 Solyc07g045390.1 Solyc07g045400.1 Solyc07g045410.1 Solyc07g045420.2 Solyc07g045430.2 Solyc07g045440.1 Solyc07g045450.1 Solyc07g045460.2 Solyc07g045470.1 Solyc07g045490.1 Solyc07g045500.1 Solyc07g045510.2 Solyc07g045520.2 Solyc07g045530.1 Solyc07g045540.2 Solyc07g045550.1 Solyc07g045560.1 Solyc07g045570.1 Solyc07g045580.1 Solyc07g045590.1 Solyc07g045600.1 Solyc07g045610.1 Solyc07g047610.2 rosids speciation node (click to collapse) rosids (~110 My ago) - block_38 TreeBeST000360.D TreeBeST005065.A TreeBeST001116.F TreeBeST008748.F.a TreeBeST000733.C.b TreeBeST008819.T TreeBeST000172.O TreeBeST005795 TreeBeST000858.C TreeBeST002583.A.a TreeBeST001736.G TreeBeST001153.D.c.a TreeBeST005816 TreeBeST005411 TreeBeST008803.F.a TreeBeST008750.C.b.b TreeBeST005529.C TreeBeST002776.B.b TreeBeST006863 TreeBeST008095 TreeBeST002894.A TreeBeST000122.Z TreeBeST003772 TreeBeST000013.I TreeBeST001155.D.a TreeBeST000271.FB TreeBeST007016.B.a TreeBeST008594.M Vitis vinifera terminal node Vitis vinifera - Chr:12 Vv12s0057g00800 Vv12s0057g00810 Vv12s0057g00820 Vv12s0057g00860 Vv12s0057g00870 Vv12s0057g00880 Vv12s0057g00890 Vv12s0057g00900 Vv12s0057g00910 Vv12s0057g00920 Vv12s0057g00930 Vv12s0057g00940 Vv12s0057g00950 Vv12s0057g00960 Vv12s0057g00970 Vv12s0057g00990 Vv12s0057g01000 Vv12s0057g01010 Vv12s0057g01020 Vv12s0057g01030 Vv12s0057g01040 Vv12s0057g01050 Vv12s0057g01060 Vv12s0057g01070 Vv12s0057g01080 Vv12s0057g01090 Vv12s0057g01100 Vv12s0057g01110 Vv12s0057g01120 Vv12s0057g01130 eurosids speciation node (click to collapse) eurosids (~107 My ago) - block_12 TreeBeST008836.B.b TreeBeST008594.M TreeBeST005168.b TreeBeST004680.A.b TreeBeST000659.O.b TreeBeST000122.Z TreeBeST002894.A TreeBeST001016.A TreeBeST002776.B.a.b TreeBeST002776.B.b.a TreeBeST006863.d TreeBeST008095 TreeBeST005529.C TreeBeST008750.C.b.b TreeBeST008803.F.a TreeBeST005411 TreeBeST005816 TreeBeST001153.D.c.a TreeBeST001736.G TreeBeST000858.C.a.b TreeBeST005795 TreeBeST000172.O TreeBeST005802.a TreeBeST008819.T TreeBeST000733.C.b TreeBeST004660.B.b TreeBeST008748.F.a TreeBeST001116.F TreeBeST005065.A fabids speciation node (click to collapse) Leguminosae speciation node (click to collapse) Rosaceae speciation node (click to collapse) Rosaceae - block_4 TreeBeST008594.M TreeBeST008699.B.b TreeBeST005168.a TreeBeST004680.A.a TreeBeST000659.O.b TreeBeST003772 TreeBeST000122.Z TreeBeST002894.A TreeBeST001016.A TreeBeST002776.B.b.a TreeBeST006863.d TreeBeST000743.F TreeBeST005529.C TreeBeST008750.C.b.b TreeBeST008803.F.a TreeBeST005411 TreeBeST005816 TreeBeST001150.B TreeBeST005969 TreeBeST007828.M TreeBeST008872.A.a.b TreeBeST000456.B.a.a.a TreeBeST001111.A.d TreeBeST008777.M.a.b TreeBeST000663.I.c TreeBeST001153.A TreeBeST001736.G TreeBeST006323.d.a.a TreeBeST006323.d.a.b TreeBeST002583.A.a Prunus persica terminal node Prunus persica - scaffold_3 ppa015734m.g ppa010256m.g ppa013593m.g ppa006513m.g ppa002186m.g ppa007741m.g ppa008501m.g ppa007675m.g ppa012163m.g ppa019408m.g ppa020913m.g ppa013542m.g ppa022099m.g ppa024040m.g ppa007646m.g ppa001014m.g ppa002284m.g ppa012812m.g ppa003253m.g ppa025801m.g ppa004396m.g ppa009546m.g ppa001488m.g ppa024050m.g ppa022426m.g ppa012743m.g ppa002219m.g ppa013647m.g ppa003564m.g Fragaria vesca terminal node Fragaria vesca - Chr:LG6 gene15600-v1.0-hybrid gene15601-v1.0-hybrid gene15602-v1.0-hybrid gene15603-v1.0-hybrid gene15604-v1.0-hybrid gene15605-v1.0-hybrid gene15606-v1.0-hybrid gene15607-v1.0-hybrid gene15608-v1.0-hybrid gene15609-v1.0-hybrid gene15610-v1.0-hybrid gene15611-v1.0-hybrid gene15516-v1.0-hybrid gene15517-v1.0-hybrid gene15518-v1.0-hybrid gene15520-v1.0-hybrid gene15521-v1.0-hybrid gene15522-v1.0-hybrid gene15523-v1.0-hybrid gene15524-v1.0-hybrid gene15525-v1.0-hybrid gene15526-v1.0-hybrid gene15527-v1.0-hybrid gene15528-v1.0-hybrid gene15529-v1.0-hybrid gene15530-v1.0-hybrid gene15531-v1.0-hybrid gene15532-v1.0-hybrid gene35232-v1.0-hybrid gene15533-v1.0-hybrid Anc arath cacao speciation node (click to collapse) Anc arath cacao (~90 My ago) - block_23 TreeBeST008836.B.b TreeBeST008594.M TreeBeST005168.a TreeBeST005155.e.b TreeBeST005168.b TreeBeST004680.A.b TreeBeST000659.O.b TreeBeST000122.Z TreeBeST002894.A TreeBeST001016.A TreeBeST002776.B.a.b TreeBeST006863.d TreeBeST000743.F TreeBeST005529.C TreeBeST008803.F.a TreeBeST005411 TreeBeST005816 TreeBeST001150.B TreeBeST007828.M TreeBeST008872.A.a.b TreeBeST000456.B.a.a.a TreeBeST001111.A.d TreeBeST006323 TreeBeST002583.A.a TreeBeST000858.C.a.a TreeBeST005795 TreeBeST000172.O TreeBeST005802.a TreeBeST000733.C.b Brassicales speciation node (click to collapse) Carica papaya terminal node Carica papaya - Chr:supercontig_136 evm.TU.supercontig_136.10 evm.TU.supercontig_136.11 evm.TU.supercontig_136.12 evm.TU.supercontig_136.13 evm.TU.supercontig_136.14 evm.TU.supercontig_136.15 evm.TU.supercontig_136.17 evm.TU.supercontig_136.18 evm.TU.supercontig_136.20 evm.TU.supercontig_136.21 evm.TU.supercontig_136.22 evm.TU.supercontig_136.23 evm.TU.supercontig_136.24 evm.TU.supercontig_136.27 evm.TU.supercontig_136.28 evm.TU.supercontig_136.29 evm.TU.supercontig_136.30 evm.TU.supercontig_136.31 evm.TU.supercontig_136.32 evm.TU.supercontig_136.33 evm.TU.supercontig_136.34 evm.TU.supercontig_136.35 evm.TU.supercontig_136.36 evm.TU.supercontig_136.37 evm.TU.supercontig_136.38 evm.TU.supercontig_136.39 evm.TU.supercontig_136.40 Theobroma cacao terminal node Theobroma cacao - Chr:Tc01 Tc01_g018770 Tc01_g018780 Tc01_g018781 Tc01_g018790 Tc01_g018800 Tc01_g018801 Tc01_g018810 Tc01_g018820 Tc01_g018821 Tc01_g018822 Tc01_g018823 Tc01_g018824 Tc01_g018830 Tc01_g018840 Tc01_g018850 Tc01_g018870 Tc01_g018880 Tc01_g018890 Tc01_g018900 Tc01_g018901 Tc01_g018902 Tc01_g018910 Tc01_g018920 Tc01_g018921 Tc01_g018930 Tc01_g018931 Tc01_g018940 Tc01_g018950 Tc01_g018960 Tc01_g018970 Commelinids speciation node (click to collapse) Commelinids (~100 My ago) - block_395 TreeBeST005411 Poaceae duplication node (click to collapse) Poaceae speciation node (click to collapse) Poaceae (~41 My ago) - block_8 TreeBeST008967.C.d.a TreeBeST001661.H.a.b TreeBeST002090.C.d.a TreeBeST008737.Z TreeBeST008633.M TreeBeST009517.P TreeBeST000084.M TreeBeST000247.M.a.a TreeBeST000485.E.a TreeBeST008560.V.a TreeBeST009586.Q.a TreeBeST004921.a TreeBeST009561.G.e TreeBeST000937.F.d TreeBeST001582.B TreeBeST000665.d.a.a TreeBeST000401.P TreeBeST003124.D.b TreeBeST003772.g TreeBeST004889.i TreeBeST002776.B TreeBeST000019.I EPlGT00140000010577 TreeBeST009514.@B TreeBeST004535.B TreeBeST008860.G.g TreeBeST003260.c TreeBeST000590.C TreeBeST000022.IB BEP clade speciation node (click to collapse) BEP clade (~40 My ago) - block_7 TreeBeST000022.IB TreeBeST000590.C TreeBeST003260.c TreeBeST008860.G.g TreeBeST004535.B TreeBeST009514.@B EPlGT00140000010577 TreeBeST000019.I TreeBeST002776.B TreeBeST004889.i TreeBeST003772.g TreeBeST003124.D.b TreeBeST000401.P TreeBeST000665.d.a.a TreeBeST001582.B TreeBeST000937.F.d TreeBeST009561.G.e TreeBeST004921.a TreeBeST009586.Q.a TreeBeST008560.V.a TreeBeST000485.E.a TreeBeST000247.M.a.a TreeBeST000084.M TreeBeST009517.P TreeBeST008633.M TreeBeST008737.Z TreeBeST002090.C.d.a TreeBeST001661.H.a.b TreeBeST008967.C.d.a Pooideae speciation node (click to collapse) Pooideae - block_9 TreeBeST000022.GB.a TreeBeST000022.IB TreeBeST000590.C TreeBeST003260.c TreeBeST008860.G.g.a TreeBeST004535.B TreeBeST009514.@B EPlGT00140000010577 TreeBeST000019.I TreeBeST002776.B TreeBeST004889.i TreeBeST003772.g TreeBeST003124.D.a TreeBeST000401.P TreeBeST000665.d.a.a TreeBeST001582.B TreeBeST000937.F.d TreeBeST009561.G.e TreeBeST004921.a TreeBeST009586.Q.a TreeBeST008560.V.a TreeBeST000485.E.a TreeBeST000247.M.a.a.c TreeBeST000084.M TreeBeST009517.P TreeBeST008633.M TreeBeST008737.Z TreeBeST002090.C.d.a TreeBeST001661.H.a.b TreeBeST008967.C.d.a Brachypodium distachyon terminal node Brachypodium distachyon - Chr:1 BRADI1G08270 BRADI1G08280 BRADI1G08287 BRADI1G08294 BRADI1G08301 BRADI1G08310 BRADI1G08320 BRADI1G08326 BRADI1G08332 FUL1 (BRADI1G08340) BRADI1G08350 BRADI1G08357 BRADI1G08370 BRADI1G08380 BRADI1G08390 BRADI1G08410 BRADI1G08420 BRADI1G08430 BRADI1G08440 BRADI1G08450 BRADI1G08460 BRADI1G08470 BRADI1G08480 BRADI1G08490 BRADI1G08500 BRADI1G08510 BRADI1G08517 BRADI1G08530 BRADI1G08540 BRADI1G08550 Hordeum vulgare subsp vulgare terminal node Hordeum vulgare subsp vulgare - Chr:5 MLOC_34938 MLOC_53865 MLOC_18612 MLOC_1852 MLOC_59942 MLOC_59943 MLOC_27721 MLOC_64192 MLOC_56792 MLOC_56793 MLOC_57500 MLOC_64157 MLOC_54479 PCS2 (MLOC_55526) MLOC_55528 MLOC_54983 MLOC_57253 MLOC_16478 MLOC_54815 MLOC_5287 STK (MLOC_12295) PHO1 (MLOC_71287) MLOC_38381 MLOC_73266 MLOC_70960 MLOC_67511 MLOC_10398 MLOC_52881 CNGC2 (MLOC_4665) Oryza speciation node (click to collapse) Oryza (~40 My ago) - block_1 TreeBeST000084.M TreeBeST000247.M.a.a.e TreeBeST000485.E.b EPlGT00140000023523 EPlGT00140000033488 EPlGT00140000002251.b.a.a.b.a EPlGT00140000002251.b.a.a.a EPlGT00140000023951 TreeBeST008560.V.a TreeBeST009586.Q.a TreeBeST004921.a TreeBeST009561.G.e EPlGT00140000019909 TreeBeST000937.F.d TreeBeST001582.B EPlGT00140000029770 TreeBeST000665.d.a.a TreeBeST001989.A.j TreeBeST000401.P TreeBeST003124.D.b TreeBeST003772.g TreeBeST004889.i.b TreeBeST002776.B TreeBeST000019.I EPlGT00140000010577.b TreeBeST009514.@B TreeBeST004535.B TreeBeST008860.G.g TreeBeST003260.c.b Oryza sativa speciation node (click to collapse) Oryza sativa - block_9 TreeBeST000485.E.b EPlGT00140000034480 TreeBeST003752.E.a.a.a EPlGT00140000023523 EPlGT00140000033488 EPlGT00140000002251.b.a.a.b.a EPlGT00140000002251.b.a.a.a EPlGT00140000023951 TreeBeST008560.V.a TreeBeST009586.Q.a TreeBeST004921.a TreeBeST009561.G.e EPlGT00140000019909 TreeBeST000937.F.d TreeBeST001582.B EPlGT00140000029770 TreeBeST000665.d.a.a TreeBeST001989.A.j TreeBeST000401.P TreeBeST003124.D.b TreeBeST003772.g TreeBeST004889.i.b TreeBeST002776.B TreeBeST000019.I EPlGT00140000010577.b TreeBeST009514.@B TreeBeST004535.B TreeBeST008860.G.g TreeBeST003260.c.b TreeBeST000590.C Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:3 OS03G0749500 (BGIOSGA013563) OS03G0749800 (BGIOSGA009807) OSJNBA0047E24.28 (BGIOSGA013564) OSJNBA0047E24.27 (BGIOSGA009806) OsI_13520 (BGIOSGA009805) OS03G0750200 (BGIOSGA013565) OsI_13522 (BGIOSGA013566) OS03G0750700 (BGIOSGA009804) BGIOSGA009803 OsI_13525 (BGIOSGA009802) OSJNBA0047E24.19 (BGIOSGA013567) OsI_13527 (BGIOSGA013568) OSJNBA0047E24.17 (BGIOSGA009801) OSJNBA0032E21.12 (BGIOSGA013569) OSJNBA0032E21.09 (BGIOSGA013570) SPO11-1 (BGIOSGA013572) OJ1112_G08.8 (BGIOSGA009800) OSJNBA0047E24.6 (BGIOSGA009799) OSJNBA0032E21.07 (BGIOSGA013573) OJ1112_G08.11 (BGIOSGA013574) OJ1112_G08.12 (BGIOSGA013575) OsI_13538 (BGIOSGA009798) OS03G0753100 (BGIOSGA009797) OJ1112_G08.15 (BGIOSGA013576) OSJNBA0032E21.02 (BGIOSGA009796) OSJNBA0032E21.01 (BGIOSGA009795) OsI_13543 (BGIOSGA009794) OsI_13544 (BGIOSGA009793) OJ1112_G08.20 (BGIOSGA009792) OsI_13546 (BGIOSGA009791) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:3 LOC_Os03g53930 LOC_Os03g53939 LOC_Os03g53950 LOC_Os03g53960 LOC_Os03g53970 LOC_Os03g53980 LOC_Os03g53990 LOC_Os03g54000 LOC_Os03g54010 LOC_Os03g54020 LOC_Os03g54030 LOC_Os03g54040 LOC_Os03g54050 LOC_Os03g54063 LOC_Os03g54070 LOC_Os03g54091 LOC_Os03g54100 LOC_Os03g54114 LOC_Os03g54130 LOC_Os03g54150 LOC_Os03g54160 LOC_Os03g54170 LOC_Os03g54180 LOC_Os03g54190 LOC_Os03g54200 LOC_Os03g54210 LOC_Os03g54220 LOC_Os03g54230 LOC_Os03g54240 LOC_Os03g54244 Oryza glaberrima terminal node Oryza glaberrima - Chr:3 ORGLA03G0312800 ORGLA03G0312900 ORGLA03G0313000 ORGLA03G0313100 ORGLA03G0313200 ORGLA03G0313300 ORGLA03G0313400 ORGLA03G0313500 ORGLA03G0313600 ORGLA03G0313700 ORGLA03G0313800 ORGLA03G0313900 ORGLA03G0314000 ORGLA03G0314100 ORGLA03G0314200 ORGLA03G0314400 ORGLA03G0314500 ORGLA03G0314600 ORGLA03G0314700 ORGLA03G0314800 ORGLA03G0314900 ORGLA03G0315000 ORGLA03G0315100 ORGLA03G0315200 ORGLA03G0315300 ORGLA03G0315400 ORGLA03G0315500 ORGLA03G0315600 ORGLA03G0315700 ORGLA03G0315800 Oryza brachyantha terminal node Oryza brachyantha - Chr:3 OB03G41270 OB03G41280 OB03G41290 OB03G41300 OB03G41310 OB03G41320 OB03G41330 OB03G41340 OB03G41350 OB03G41360 OB03G41380 OB03G41390 OB03G41400 OB03G41410 OB03G41430 OB03G41440 OB03G41450 OB03G41460 OB03G41470 OB03G41480 OB03G41490 OB03G41500 OB03G41510 OB03G41520 OB03G41530 OB03G41540 OB03G41550 OB03G41560 OB03G41570 Panicoideae speciation node (click to collapse) Panicoideae - block_1 TreeBeST002090.C.d.a TreeBeST008737.Z TreeBeST008633.M TreeBeST009517.P TreeBeST000084.M TreeBeST000247.M.a.a.a EPlGT00140000017394 TreeBeST000247.M.a.a.b TreeBeST000485.E.a TreeBeST008560.V.a TreeBeST009586.Q.a TreeBeST004921.a TreeBeST009561.G.e TreeBeST000937.F.d.a TreeBeST001582.B TreeBeST000665.d.a.a TreeBeST002059.D.c TreeBeST000401.P TreeBeST003124.D.b TreeBeST003772.g TreeBeST004889.i TreeBeST002776.B TreeBeST000019.I EPlGT00140000010577 TreeBeST009514.@B.f TreeBeST004535.B TreeBeST008860.G.g TreeBeST003260.c TreeBeST000590.C Andropogoneae duplication node (click to collapse) Andropogoneae speciation node (click to collapse) Andropogoneae (~9 My ago) - block_1 TreeBeST003260.c TreeBeST002328.C.c TreeBeST008860.G.g TreeBeST004535.B TreeBeST009514.@B.f EPlGT00140000010577 TreeBeST000019.I TreeBeST002776.B TreeBeST004889.i.c TreeBeST003772.g TreeBeST003124.D.b TreeBeST000401.P TreeBeST002059.D.c.b TreeBeST000665.d.a.a.a TreeBeST000665.d.a.a.b TreeBeST001582.B TreeBeST000937.F.d.a TreeBeST009561.G.e TreeBeST004921.a TreeBeST009586.Q.a.a TreeBeST008560.V.a.a TreeBeST000485.E.b TreeBeST000247.M.a.a.b EPlGT00140000017394 TreeBeST000247.M.a.a.a TreeBeST000084.M TreeBeST009517.P TreeBeST008633.M TreeBeST008737.Z TreeBeST002090.C.d.a Sorghum bicolor terminal node Sorghum bicolor - Chr:1 SB01G007705 (Sb01g007705) 170F8.4 (Sb01g007710) 170F8.3 (Sb01g007720) 170F8.2 (Sb01g007730) 170F8.1 (Sb01g007740) SB01G007750 (Sb01g007750) SB01G007760 (Sb01g007760) CYB5 (Sb01g007770) SB01G007780 (Sb01g007780) SB01G007790 (Sb01g007790) SB01G007800 (Sb01g007800) Sb01g007810 SB01G007820 (Sb01g007820) SB01G007830 (Sb01g007830) SB01G007840 (Sb01g007840) SB01G007855 (Sb01g007855) SB01G007860 (Sb01g007860) SB01G007870 (Sb01g007870) SB01G007872 (Sb01g007872) SB01G007874 (Sb01g007874) SB01G007876 (Sb01g007876) SB01G007878 (Sb01g007878) SB01G007880 (Sb01g007880) SB01G007890 (Sb01g007890) SB01G007900 (Sb01g007900) SB01G007910 (Sb01g007910) SB01G007920 (Sb01g007920) SB01G007930 (Sb01g007930) SB01G007940 (Sb01g007940) SB01G007950 (Sb01g007950) Zea mays duplication node (click to collapse) Zea mays duplication node (click to collapse) Zea mays terminal node Zea mays - Chr:8 lcyE (GRMZM2G012966) GRMZM2G318121 GRMZM2G165454 GRMZM2G165428 GRMZM2G463133 GRMZM2G142987 AC196426.3_FG008 AC196426.3_FG007 GRMZM2G096655 AC201807.3_FG003 GRMZM2G539705 GRMZM2G395771 GRMZM2G096764 GRMZM2G050553 GRMZM2G027333 GRMZM2G501124 AC204393.3_FG005 AC204393.3_FG006 GRMZM2G144239 ZmGR2b (GRMZM2G142705) GRMZM2G114878 GRMZM2G114895 GRMZM2G420119 AC187087.4_FG003 GRMZM2G046037 AC187087.4_FG001 GRMZM5G898394 GRMZM2G054900 GRMZM2G054876 GRMZM5G836325 Zea mays terminal node Zea mays - Chr:7 GRMZM5G822679 GRMZM2G523818 GRMZM2G369277 GRMZM2G369284 GRMZM2G068006 GRMZM2G068008 GRMZM2G470010 GRMZM2G145654 GRMZM2G145633 GRMZM2G350205 GRMZM5G891809 GRMZM2G044060 GRMZM2G044174 AC204845.3_FG008 GRMZM2G044194 GRMZM2G509794 GRMZM2G438652 GRMZM2G006071 GRMZM2G008234 GRMZM2G008061 GRMZM2G007936 GRMZM2G456997 GRMZM2G457001 AC209793.3_FG003 GRMZM5G898390 GRMZM5G858923 GRMZM2G437187 AC195399.3_FG004 pr1 (GRMZM2G465226) GRMZM2G165108 Zea mays terminal node Zea mays - Chr:5 GRMZM2G072231 GRMZM5G883008 AC197034.3_FG010 GRMZM2G072071 GRMZM5G875251 GRMZM5G832630 GRMZM2G371942 Bk2L4 (GRMZM2G071970) GRMZM2G071917 GRMZM2G071745 m31 (GRMZM2G071620) m15 (GRMZM2G553379) GRMZM2G130065 GRMZM2G130053 GRMZM2G129913 AC191434.3_FG004 GRMZM2G129865 GRMZM2G432176 GRMZM2G129817 AC185628.3_FG010 GRMZM2G172132 GRMZM2G172043 GRMZM5G824862 gla3 (GRMZM2G473711) GRMZM2G473697 GRMZM5G894145 GRMZM2G172011 GRMZM2G171998 GRMZM2G171987 GRMZM5G886820 Andropogoneae speciation node (click to collapse) Zea mays terminal node Zea mays - Chr:1 GRMZM2G589058 GRMZM2G177867 GRMZM2G177928 GRMZM2G177974 GRMZM5G815323 GRMZM2G120484 GRMZM2G421500 GRMZM2G421491 GRMZM2G421498 AC205111.3_FG001 GRMZM2G058158 GRMZM2G516809 GRMZM2G058144 GRMZM2G058032 GRMZM5G843115 GRMZM2G357074 GRMZM2G083677 GRMZM2G464782 AC192452.3_FG005 GRMZM2G164249 GRMZM5G810254 GRMZM2G164233 AC192452.3_FG002 GRMZM2G032962 ZMM4 (GRMZM2G032339) AC186341.4_FG002 GRMZM2G316805 GRMZM2G087095 GRMZM2G513287 GRMZM2G021781 Setaria italica terminal node Setaria italica - scaffold_9 Si034278m.g Si038787m.g Si035820m.g Si035669m.g Si037994m.g PAP2 (Si037197m.g) Si039860m.g FUL1 (Si037627m.g) Si034953m.g Si036402m.g Si038527m.g Si037336m.g Si036417m.g Si036131m.g Si038380m.g Si038028m.g Si034803m.g Si034415m.g Si033905m.g Si038100m.g Si036087m.g Si034940m.g Si036007m.g Si033948m.g Si039703m.g Si037683m.g Si037215m.g Si034545m.g Si038457m.g Poaceae speciation node (click to collapse) Panicoideae speciation node (click to collapse) Andropogoneae speciation node (click to collapse) Zea mays duplication node (click to collapse) Zea mays terminal node Zea mays - Chr:2 GRMZM5G887364 GRMZM5G867802 GRMZM5G851531 GRMZM2G494478 GRMZM2G014400 GRMZM2G112954 GRMZM5G835362 GRMZM2G034927 GRMZM2G034764 GRMZM5G862554 GRMZM2G113848 AC206322.3_FG001 GRMZM2G403800 GRMZM2G105207 GRMZM2G105302 GRMZM2G351417 GRMZM2G003933 GRMZM5G881349 GRMZM2G003937 GRMZM2G129575 GRMZM2G454377 GRMZM2G454474 GRMZM2G454483 GRMZM2G575305 GRMZM2G321142 GRMZM2G021151 GRMZM2G019060 GRMZM2G028905 GRMZM5G808394 GRMZM2G090233 Zea mays terminal node Zea mays - Chr:7 AC199396.4_FG008 GRMZM2G095806 GRMZM2G472869 GRMZM2G148892 GRMZM2G148864 GRMZM2G450069 GRMZM2G162086 GRMZM2G162082 GRMZM2G162893 GRMZM2G015520 AC203770.3_FG004 GRMZM2G393455 GRMZM2G092131 GRMZM2G162167 GRMZM5G851999 GRMZM2G171884 GRMZM2G171871 AC216042.3_FG006 GRMZM5G815377 GRMZM2G357040 AC216042.3_FG004 GRMZM2G058208 GRMZM2G058173 URM1 (GRMZM2G179689) GRMZM2G046177 GRMZM2G046186 GRMZM5G829293 AC225348.3_FG002 GRF10 (GRMZM2G096709) GRMZM2G096824 Musa acuminata subsp malaccensis duplication node (click to collapse) Musa acuminata subsp malaccensis terminal node Musa acuminata subsp malaccensis - Chr:4 GSMUA_Achr4G32780_001 GSMUA_Achr4G32800_001 GSMUA_Achr4G32810_001 GSMUA_Achr4G32820_001 GSMUA_Achr4G32830_001 GSMUA_Achr4G32840_001 GSMUA_Achr4G32850_001 GSMUA_Achr4G32860_001 GSMUA_Achr4G32870_001 GSMUA_Achr4G32880_001 GSMUA_Achr4G32890_001 GSMUA_Achr4G32900_001 GSMUA_Achr4G32910_001 GSMUA_Achr4G32920_001 GSMUA_Achr4G32950_001 GSMUA_Achr4G32960_001 GSMUA_Achr4G32970_001 GSMUA_Achr4G32980_001 GSMUA_Achr4G32990_001 GSMUA_Achr4G33000_001 GSMUA_Achr4G33010_001 GSMUA_Achr4G33020_001 GSMUA_Achr4G33030_001 GSMUA_Achr4G33040_001 GSMUA_Achr4G33050_001 GSMUA_Achr4G33060_001 GSMUA_Achr4G33070_001 GSMUA_Achr4G33080_001 Musa acuminata subsp malaccensis terminal node Musa acuminata subsp malaccensis - Chr:6 GSMUA_Achr6G00010_001 GSMUA_Achr6G00020_001 GSMUA_Achr6G00030_001 GSMUA_Achr6G00040_001 GSMUA_Achr6G00050_001 GSMUA_Achr6G00060_001 GSMUA_Achr6G00070_001 GSMUA_Achr6G00090_001 GSMUA_Achr6G00100_001 GSMUA_Achr6G00110_001 GSMUA_Achr6G00120_001 GSMUA_Achr6G00130_001 GSMUA_Achr6G00140_001 GSMUA_Achr6G00150_001 GSMUA_Achr6G00160_001 GSMUA_Achr6G00170_001 GSMUA_Achr6G00180_001 GSMUA_Achr6G00190_001 GSMUA_Achr6G00200_001 GSMUA_Achr6G00210_001 GSMUA_Achr6G00230_001 Magnoliophyta speciation node (click to collapse) Magnoliophyta (~163 My ago) - block_210 TreeBeST005411 Commelinids speciation node (click to collapse) Musa acuminata subsp malaccensis terminal node Musa acuminata subsp malaccensis - Chr:4 GSMUA_Achr4G32800_001 GSMUA_Achr4G32810_001 GSMUA_Achr4G32820_001 GSMUA_Achr4G32830_001 GSMUA_Achr4G32840_001 GSMUA_Achr4G32850_001 GSMUA_Achr4G32860_001 GSMUA_Achr4G32870_001 GSMUA_Achr4G32880_001 GSMUA_Achr4G32890_001 GSMUA_Achr4G32900_001 GSMUA_Achr4G32910_001 GSMUA_Achr4G32920_001 GSMUA_Achr4G32950_001 GSMUA_Achr4G32960_001 GSMUA_Achr4G32970_001 GSMUA_Achr4G32980_001 GSMUA_Achr4G32990_001 GSMUA_Achr4G33000_001 GSMUA_Achr4G33010_001 GSMUA_Achr4G33020_001 GSMUA_Achr4G33030_001 GSMUA_Achr4G33040_001 GSMUA_Achr4G33050_001 GSMUA_Achr4G33060_001 GSMUA_Achr4G33070_001 GSMUA_Achr4G33080_001 GSMUA_Achr4G33090_001 Dicotyledones speciation node (click to collapse) rosids speciation node (click to collapse) eurosids speciation node (click to collapse) Anc arath cacao speciation node (click to collapse) Brassicales speciation node (click to collapse) Brassicales - block_278 TreeBeST005411 TreeBeST005816 TreeBeST007828.M TreeBeST008872.A.a.b TreeBeST000456.B.a.a.a TreeBeST002583.A.a TreeBeST000858.C.a.a TreeBeST005795 TreeBeST000172.O TreeBeST005802.a TreeBeST000230.G.a.b.a TreeBeST001383.E TreeBeST007206 Brassicaceae speciation node (click to collapse) Brassicaceae (~16 My ago) - block_7 TreeBeST001007.B TreeBeST000738.L.b TreeBeST009560.Y TreeBeST006062 TreeBeST006063.C TreeBeST001055.H.a.c TreeBeST000460.F.b TreeBeST006622.e TreeBeST000088.E.a.a TreeBeST000811.A.a.b.b.b.b TreeBeST000013.I.a TreeBeST000122.Z.c TreeBeST006863.d TreeBeST000743.F TreeBeST005969.c TreeBeST001505.A.b.a TreeBeST003453.F TreeBeST003453.H TreeBeST000205.B.a.a TreeBeST009543.X TreeBeST000010.AB.b.b.c TreeBeST006125.a.a TreeBeST005990 TreeBeST000212.N.b.a.b.b.b.a TreeBeST000775.G TreeBeST001095.I.b TreeBeST000155.E.c.a.b.b.b.e.a TreeBeST004004.B.a TreeBeST000164.A.b.a.a.a.a.a.b.a Camelineae speciation node (click to collapse) Camelineae - block_2 TreeBeST001007.B TreeBeST000738.L.b TreeBeST009560.Y TreeBeST006062 TreeBeST006063.C TreeBeST001055.H.a.c TreeBeST000460.F.b TreeBeST006622.e TreeBeST000088.E.a.a TreeBeST000811.A.a.b.b.b.b TreeBeST000013.I.a TreeBeST000122.Z.c TreeBeST006863.d TreeBeST000743.F TreeBeST005969.c TreeBeST001505.A.b.a TreeBeST003453.F TreeBeST000456.F.a.a.a.a TreeBeST000205.B.a.a TreeBeST009543.X TreeBeST000010.AB.b.b.c TreeBeST006125.a.a TreeBeST008796.A.b.b.a.a.a.a.e.b.b.a TreeBeST005990 TreeBeST000212.N.b.a.b.b.b.a TreeBeST000775.G TreeBeST001095.I.b TreeBeST000155.E.c.a.b.b.b.e.a TreeBeST004004.B.a Capsella rubella terminal node Capsella rubella - scaffold_7 Carubv10006570m.g Carubv10004266m.g Carubv10007070m.g Carubv10007822m.g Carubv10006786m.g Carubv10004456m.g Carubv10006399m.g Carubv10006381m.g Carubv10006771m.g Carubv10006985m.g Carubv10007264m.g Carubv10006281m.g Carubv10007225m.g Carubv10007424m.g Carubv10007573m.g Carubv10007578m.g Carubv10007233m.g Carubv10007000m.g Carubv10007413m.g Carubv10004025m.g Carubv10006217m.g Carubv10004896m.g Carubv10007326m.g Carubv10004066m.g Carubv10007851m.g Carubv10007675m.g Carubv10004715m.g Carubv10005757m.g Carubv10006459m.g Carubv10007261m.g Arabidopsis speciation node (click to collapse) Arabidopsis (~5 My ago) - block_10 TreeBeST001007.B TreeBeST000738.L.b TreeBeST009560.Y TreeBeST006062 TreeBeST006063.C TreeBeST008061 TreeBeST001055.H.a.c TreeBeST000460.F.b TreeBeST006622.e TreeBeST000088.E.a.a TreeBeST000013.I.a TreeBeST000122.Z.c TreeBeST006863.d TreeBeST000743.F TreeBeST005969.c TreeBeST001505.A.b.a TreeBeST003453.F TreeBeST000456.F.a.a.a.a TreeBeST000205.B.a.a TreeBeST009543.X TreeBeST000010.AB.b.b.c TreeBeST006125.a.a TreeBeST008796.A.b.b.a.a.a.a.e.b.b.a TreeBeST005990 TreeBeST000212.N.b.a.b.b.b.a TreeBeST000775.G TreeBeST001095.I.b TreeBeST000155.E.c.a.b.b.b.e.a TreeBeST004004.B.a Arabidopsis lyrata subsp lyrata terminal node Arabidopsis lyrata subsp lyrata - Chr:7 355565 (fgenesh1_pg.C_scaffold_7002738) 891177 (Al_scaffold_0007_3163) 493633 (fgenesh2_kg.7__3066__AT5G35750.1) 493634 (fgenesh2_kg.7__3067__AT5G35753.1) 891181 (Al_scaffold_0007_3167) 891182 (Al_scaffold_0007_3168) 947220 (scaffold_703449.1) 355570 (fgenesh1_pg.C_scaffold_7002743) 947222 (scaffold_703451.1) 891186 (Al_scaffold_0007_3172) 493636 (fgenesh2_kg.7__3069__AT5G35790.1) 947225 (scaffold_703454.1) 891189 (Al_scaffold_0007_3175) 947226 (scaffold_703455.1) 947229 (scaffold_703458.1) 891195 (Al_scaffold_0007_3181) 493638 (fgenesh2_kg.7__3071__AT5G35870.1) 355577 (fgenesh1_pg.C_scaffold_7002750) 355578 (fgenesh1_pg.C_scaffold_7002751) 947235 (scaffold_703464.1) 493640 (fgenesh2_kg.7__3073__AT5G43730.1) 891201 (Al_scaffold_0007_3187) 891202 (Al_scaffold_0007_3188) 947238 (scaffold_703467.1) 330218 (fgenesh1_pm.C_scaffold_7002445) 493643 (fgenesh2_kg.7__3076__AT5G35940.1) 891206 (Al_scaffold_0007_3192) 355584 (fgenesh1_pg.C_scaffold_7002757) 947242 (scaffold_703471.1) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:5 AT5G35698 (AT5G35698) FIM2 (AT5G35700) CYP71B8 (AT5G35715) AT5G35730 (AT5G35730) AT5G35732 (AT5G35732) AT5G35735 (AT5G35735) AT5G35737 (AT5G35737) AHK2 (AT5G35750) AT5G35753 (AT5G35753) AT5G35760 (AT5G35760) SAP (AT5G35770) G6PD1 (AT5G35790) AT5G35810 (AT5G35810) AT5G35830 (AT5G35830) AT5G35870 (AT5G35870) AT5G35890 (AT5G35890) LBD35 (AT5G35900) AT5G35910 (AT5G35910) CYP79A3P (AT5G35917) CYP79A4P (AT5G35920) AT5G35926 (AT5G35926) AT5G35930 (AT5G35930) AT5G35940 (AT5G35940) AT5G35945 (AT5G35945) AT5G35950 (AT5G35950) AT5G35960 (AT5G35960) AT5G35970 (AT5G35970) YAK1 (AT5G35980) AT5G35995 (AT5G35995) Brassiceae speciation node (click to collapse) Brassiceae - block_20 TreeBeST004004.B.a TreeBeST000155.E.c.a.b.b.b.e.a TreeBeST001095.I.b TreeBeST000775.G TreeBeST000212.N.b.a.b.b.b.a TreeBeST005990 TreeBeST006125.a.a TreeBeST000010.AB.b.b.c TreeBeST000010.AB.b.b.d TreeBeST009543.X TreeBeST000205.B.a.a.d TreeBeST003453.H TreeBeST003453.F TreeBeST001505.A.b.a TreeBeST005969.c TreeBeST000743.F TreeBeST006863.d TreeBeST000122.Z.c TreeBeST000013.I.a.b TreeBeST000811.A.a.b.b.b.b TreeBeST000088.E.a.a TreeBeST006622.e TreeBeST000460.F.b TreeBeST001055.H.a.c TreeBeST006063.C TreeBeST006062 TreeBeST009560.Y TreeBeST000738.L.b TreeBeST001007.B Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A05 Bra018555 (Bra018555) Bra018556 (Bra018556) Bra018557 (Bra018557) Bra018558 (Bra018558) Bra018559 (Bra018559) Bra018560 (Bra018560) Bra018561 (Bra018561) Bra018562 (Bra018562) Bra018563 (Bra018563) Bra039479 (Bra039479) Bra039480 (Bra039480) Bra039481 (Bra039481) Bra039482 (Bra039482) Bra039483 (Bra039483) Bra039484 (Bra039484) Bra039486 (Bra039486) Bra039487 (Bra039487) Bra039488 (Bra039488) Bra039489 (Bra039489) Bra039490 (Bra039490) Bra039491 (Bra039491) Bra039492 (Bra039492) Bra039493 (Bra039493) Bra039494 (Bra039494) Bra039495 (Bra039495) Bra039496 (Bra039496) Bra039497 (Bra039497) Bra039498 (Bra039498) Bra039499 (Bra039499) Bra039500 (Bra039500) Eutremeae speciation node (click to collapse) Eutremeae - block_21 TreeBeST008563.V.a.c TreeBeST001007.B TreeBeST000738.L.b TreeBeST009560.Y TreeBeST006062 TreeBeST006063.C TreeBeST001055.H.a.c TreeBeST000460.F.b TreeBeST006622.e TreeBeST000811.A.a.b.b.b.b TreeBeST000013.I.a.b TreeBeST000122.Z.c TreeBeST006863.d TreeBeST000743.F TreeBeST005969.c TreeBeST001505.A.b.a TreeBeST003453.F TreeBeST000205.B.a.a.d TreeBeST009543.X TreeBeST000010.AB.b.b.d TreeBeST006125.a.a TreeBeST005990 TreeBeST000775.G TreeBeST001095.I.b TreeBeST004004.B.a TreeBeST000164.A.b.a.a.a.a.a.b.a TreeBeST000041.I.b.b.b.c TreeBeST005461.B.d TreeBeST000859.D.b Thellungiella parvula duplication node (click to collapse) Thellungiella parvula terminal node Thellungiella parvula - Chr:ch7-2 Tp7g06120 Tp7g06130 Tp7g06140 Tp7g06150 Tp7g06160 Tp7g06170 Tp7g06180 Tp7g06190 Tp7g06200 Tp7g06210 Tp7g06220 Tp7g06230 Tp7g06240 Tp7g06250 Tp7g06260 Tp7g06290 Tp7g06300 Tp7g06310 Tp7g06320 Tp7g06330 Tp7g06340 Tp7g06350 Tp7g06360 Tp7g06370 Tp7g06380 Tp7g06390 Tp7g06400 Tp7g06410 Tp7g06420 Thellungiella parvula terminal node Thellungiella parvula - Chr:ch7-2 Tp7g06130 Tp7g06140 Tp7g06150 Tp7g06160 Tp7g06170 Tp7g06180 Tp7g06190 Tp7g06200 Tp7g06210 Tp7g06220 Tp7g06230 Tp7g06240 Tp7g06250 Tp7g06260 Tp7g06290 Tp7g06300 Tp7g06310 Tp7g06320 Tp7g06330 Tp7g06340 Tp7g06350 Tp7g06360 Tp7g06370 Tp7g06380 Tp7g06390 Tp7g06400 Tp7g06410 Tp7g06420 Thellungiella halophila terminal node Thellungiella halophila - scaffold_6 Thhalv10003712m.g Thhalv10004205m.g Thhalv10005586m.g Thhalv10004290m.g Thhalv10005561m.g Thhalv10005006m.g Thhalv10004660m.g Thhalv10004344m.g Thhalv10005424m.g Thhalv10003604m.g Thhalv10003611m.g Thhalv10005419m.g Thhalv10003545m.g Thhalv10003636m.g Thhalv10005712m.g Thhalv10003851m.g Thhalv10005699m.g Thhalv10005035m.g Thhalv10003738m.g Thhalv10003542m.g Thhalv10004354m.g Thhalv10005204m.g Thhalv10004243m.g Thhalv10003746m.g Thhalv10005664m.g Thhalv10005631m.g Thhalv10005525m.g Thhalv10005652m.g Thhalv10003827m.g Carica papaya terminal node Carica papaya - Chr:supercontig_136 evm.TU.supercontig_136.11 evm.TU.supercontig_136.12 evm.TU.supercontig_136.13 evm.TU.supercontig_136.14 evm.TU.supercontig_136.15 evm.TU.supercontig_136.17 evm.TU.supercontig_136.18 evm.TU.supercontig_136.20 evm.TU.supercontig_136.21 evm.TU.supercontig_136.22 evm.TU.supercontig_136.23 evm.TU.supercontig_136.24 evm.TU.supercontig_136.27 evm.TU.supercontig_136.28 evm.TU.supercontig_136.29 evm.TU.supercontig_136.30 evm.TU.supercontig_136.31 evm.TU.supercontig_136.32 evm.TU.supercontig_136.33 evm.TU.supercontig_136.34 evm.TU.supercontig_136.35 evm.TU.supercontig_136.36 evm.TU.supercontig_136.37 evm.TU.supercontig_136.38 evm.TU.supercontig_136.39 evm.TU.supercontig_136.40 evm.TU.supercontig_136.41 TreeBeST002231.D TreeBeST002231.D TreeBeST002231.D AT1G09665 (AT1G09665) 910676 (Al_scaffold_0001_930) Carubv10011501m.g TreeBeST002231.D Bra020002 (Bra020002) TreeBeST002003.F.c TreeBeST002003.F.c TreeBeST002003.F.c AT1G09640 (AT1G09640) 471063 (fgenesh2_kg.1__1017__AT1G09640.1) Carubv10009284m.g TreeBeST002003.F.c.a.b TreeBeST002003.F.c.a.b TreeBeST002003.F.c.b Tp1g08250 Thhalv10007759m.g Bra020005 (Bra020005) Bra031676 (Bra031676) TreeBeST002003.A.b.a Carubv10010723m.g TreeBeST002003.A.b.a Tp1g08260 Thhalv10009166m.g TreeBeST004898.b.f TreeBeST004898.b.f TreeBeST004898.b.f AT1G09645 (AT1G09645) 919723 (scaffold_101004.1) TreeBeST004898.b.f Bra020004 (Bra020004) TreeBeST000515.E.i TreeBeST000515.E.i TreeBeST000515.E.i AT1G09580 (AT1G09580) 471056 (fgenesh2_kg.1__1010__AT1G09580.1) Carubv10010159m.g TreeBeST000515.E.i.a TreeBeST000515.E.i.b TreeBeST000515.E.i.a Tp1g08190 Thhalv10008686m.g Bra020010 (Bra020010) Bra031678 (Bra031678) TreeBeST002190.A.b.b TreeBeST002190.A.b.b.b TreeBeST002190.A.b.b.b AT1G09620 (AT1G09620) 471060 (fgenesh2_kg.1__1014__AT1G09620.1) Carubv10008148m.g TreeBeST002190.A.b.b TreeBeST002190.A.b.b Tp1g08230 Thhalv10006633m.g Bra020007 (Bra020007) Bra031675 (Bra031675) TreeBeST009563.E.b.a TreeBeST009563.E.b.a AT1G09510 (AT1G09510) 471046 (fgenesh2_kg.1__1000__AT1G09510.1) Carubv10011960m.g TreeBeST009563.E.b.b.a.a 919704 (scaffold_100985.1) TreeBeST009563.E.b.b.a.a Tp1g08090 Tp1g08110 EPlGT00140000030561 AT1G09625 (AT1G09625) 919720 (scaffold_101001.1) AT1G09480 (AT1G09480) TreeBeST000287.Q.a.a TreeBeST000287.Q.a.a TreeBeST000287.Q.a.a TreeBeST000287.Q.a.a TreeBeST000287.Q.a.a.g.a.a AT1G09550 (AT1G09550) 311997 (fgenesh1_pm.C_scaffold_1000777) TreeBeST000287.Q.a.a POPTRDRAFT_240173 (POPTR_0013s00280) TreeBeST000287.Q.a.a GLYMA03G38650 GLYMA19G41240 TreeBeST000287.Q.a.a GLYMA10G28230 GLYMA20G22210 Vv14s0060g00230 Bra020015 (Bra020015) TreeBeST000274.G TreeBeST000274.G.g TreeBeST000274.G.g TreeBeST000274.G.g AT1G09440 (AT1G09440) 311987 (fgenesh1_pm.C_scaffold_1000767) Carubv10009469m.g TreeBeST000274.G.g.b Tp1g08050 Thhalv10007579m.g Bra020024 (Bra020024) Bra031665 (Bra031665) evm.TU.supercontig_48.217 TreeBeST000274.G.e TreeBeST000945.B.b.e TreeBeST000945.B.b.e TreeBeST000945.B.b.e AT1G09575 (AT1G09575) 910664 (Al_scaffold_0001_918) Carubv10009897m.g TreeBeST000945.B.b.e TreeBeST000945.B.b.e Tp1g08180 Thhalv10008337m.g Bra020011 (Bra020011) TreeBeST000076.G TreeBeST000076.G.e TreeBeST000076.G.e TreeBeST000076.G.e AT1G09460 (AT1G09460) 910654 (Al_scaffold_0001_908) Carubv10009486m.g TreeBeST000076.G.e Tp1g08070 Thhalv10008261m.g Bra020023 (Bra020023) evm.TU.supercontig_48.219 GLYMA03G38770 TreeBeST000076.G TreeBeST000076.K.b TreeBeST000076.K.b TreeBeST000076.K.b evm.TU.supercontig_136.19 TreeBeST000076.K TreeBeST000076.K MLOC_54984 TreeBeST000076.K OB03G41370 TreeBeST000076.K Si039775m.g GSMUA_Achr4G32790_001 GSMUA_Achr6G00220_001 GSMUA_Achr4G32790_001 TreeBeST000076.K.b TreeBeST000076.K.b TreeBeST000076.K.b 947216 (scaffold_703445.1) AT5G35740 (AT5G35740) TreeBeST000076.K.b TreeBeST000076.K.b Tp7g06430 Thhalv10005149m.g evm.TU.supercontig_136.19 TreeBeST000113.U.b TreeBeST000113.U.b TreeBeST000113.U.b TreeBeST000113.U.b TreeBeST000113.U.b.c.a.a.a TreeBeST000113.U.b.c.a.a.a TreeBeST000113.U.b.c.a.a.a MYB61 (AT1G09540) 919710 (scaffold_100991.1) Carubv10009497m.g TreeBeST000113.U.b.c.a.a.a Tp1g08140 Thhalv10008000m.g Bra031669 (Bra031669) TreeBeST000113.U.b TreeBeST000113.U.b MYB160 (GLYMA03G38660) GLYMA19G41250 TreeBeST000113.U.b.a GLYMA10G28250 MYB89 (GLYMA20G22230) chr5.CM0048.130.r2.m TreeBeST000113.U.b ppa019718m.g gene22961-v1.0-hybrid TreeBeST000113.U.a.b Bra020016 (Bra020016) Tc05_g031830 TreeBeST000113.U.a.b MYB216 (POPTR_0013s00290) chr5.CM0048.320.r2.d Vv14s0060g00240 TreeBeST000113.U.a.a.a.a PGSC0003DMG400015767 (PGSC0003DMG400015767) Solyc10g044680.1 TreeBeST008578.K TreeBeST008578.K.a.a TreeBeST008578.K.a.a TreeBeST008578.K.a.a GLP5 (AT1G09560) 910662 (Al_scaffold_0001_916) Carubv10010233m.g evm.TU.supercontig_48.230 TreeBeST008578.I.a TreeBeST008578.I.a TreeBeST008578.I.a TreeBeST008578.K.a.b TreeBeST008578.K.a.b Tp1g08160 Thhalv10008725m.g Bra020014 (Bra020014) Bra031671 (Bra031671) Tc05_g031880 TreeBeST008578.I.a POPTRDRAFT_834434 (POPTR_0013s00240) TreeBeST008578.I.a GMA.2470 (GLYMA03G38630) GLYMA19G41070 GLYMA19G41220 TreeBeST008578.I.a.h GMA.4401 (GLYMA10G28020) GLYMA10G28190 GLYMA20G22180 chr5.CM0048.210.r2.m chr5.CM0048.420.r2.d TreeBeST008578.I.a ppa011263m.g gene22950-v1.0-hybrid gene22951-v1.0-hybrid Vv14s0060g00120 TreeBeST002253.A.b TreeBeST002253.A.b TreeBeST002253.A.b TreeBeST002253.A.b ACLA-3 (AT1G09430) 471036 (fgenesh2_kg.1__990__AT1G09430.1) Carubv10009231m.g TreeBeST002253.A.b Tp1g08040 Thhalv10007711m.g GSMUA_Achr8G06210_001 PGSC0003DMG400029179 (PGSC0003DMG400029179) TreeBeST000252.I TreeBeST000252.I TreeBeST000252.I POC1 (AT1G09530) Carubv10008815m.g Bra020017 (Bra020017) TreeBeST000252.I TreeBeST000252.I GLYMA03G38675 GLYMA19G41261 TreeBeST000252.I TreeBeST000252.K TreeBeST000252.I.d TreeBeST000252.I.d TreeBeST000252.I.d 471048 (fgenesh2_kg.1__1002__AT1G09530.2) TreeBeST000252.I.d Tp1g08130 Thhalv10007343m.g Bra031668 (Bra031668) Tc05_g031820 TreeBeST000252.K POPTRDRAFT_662518 (POPTR_0013s00310) TreeBeST000252.K GLYMA10G28290 GLYMA20G22291 chr5.CM0048.80.r2.d TreeBeST000252.K TreeBeST000252.M ppa001899m.g Vv14s0060g00260 TreeBeST000081.@B TreeBeST000081.@B TreeBeST000081.@B AT1G09680 (AT1G09680) 919726 (scaffold_101007.1) Carubv10008618m.g TreeBeST000081.@B TreeBeST000081.@B Tp1g08270 Thhalv10007116m.g Bra020001 (Bra020001) TreeBeST000081.T.b.a.b.b.a Tc05_g031890 TreeBeST000081.T.b.a.b.b.a chr5.CM0048.220.r2.m TreeBeST000081.T.b.a.b.b.a ppa001925m.g gene22949-v1.0-hybrid TreeBeST000081.T.b.a.a Solyc07g047620.1 ppb017187m.g TreeBeST001901.A.c.a.d AT1G09590 (AT1G09590) 919727 (scaffold_101008.1) TreeBeST001213.D TreeBeST001213.D TreeBeST001213.D TreeBeST001213.D TreeBeST001213.D TreeBeST001213.D TreeBeST001213.D TreeBeST001213.D TreeBeST001213.D PHYA (AT1G09570) 471053 (fgenesh2_kg.1__1007__AT1G09570.1) Carubv10008141m.g TreeBeST001213.D TreeBeST001213.D Tp1g08170 Thhalv10006625m.g Bra020013 (Bra020013) Bra031672 (Bra031672) evm.TU.supercontig_48.231 Tc05_g031900 TreeBeST001213.D PHYA (POPTR_0013s00220) TreeBeST001213.D GLYMA03G38620 GLYMA19G41210 TreeBeST001213.D.d PHYA (GLYMA10G28170) PHYA (GLYMA20G22160) chr5.CM0048.230.r2.m TreeBeST001213.D ppa000643m.g gene22948-v1.0-hybrid PHYA (Vv14s0060g00100) TreeBeST001213.D PHYA (PGSC0003DMG400015766) PHYA (Solyc10g044670.1) TreeBeST001213.D GSMUA_Achr5G27310_001 GSMUA_Achr8G06130_001 TreeBeST001213.D.g.a TreeBeST001213.D.g.a BRADI1G10510 BRADI1G10520 TreeBeST001213.D.g.a.b BRADI1G10510 BRADI1G10520 PHYA (MLOC_81684) TreeBeST001213.D.g.a TreeBeST001213.D.g.a OsI_13315 (BGIOSGA009906) PHYA (LOC_Os03g51030) ORGLA03G0410100 OB03G39220 TreeBeST001213.D.g.a TreeBeST001213.D.g.a.d TreeBeST001213.D.g.a.c PHYA (Sb01g009920) SB01G009930 (Sb01g009930) PHYA (Sb01g009920) SB01G009930 (Sb01g009930) GRMZM2G111939 PHYA1 (GRMZM2G181028) phyA1 (GRMZM2G157727) Si033984m.g Si027327m.g GRMZM2G387155 TreeBeST001213.E TreeBeST001213.C TreeBeST001213.C TreeBeST001213.E TreeBeST001213.E PGSC0003DMG400017396 (PGSC0003DMG400017396) PHYF (Solyc07g045480.2) TreeBeST001213.C TreeBeST001213.E PHYC (Vv12s0057g00980) TreeBeST001213.E TreeBeST001213.C TreeBeST001213.E ppa000506m.g gene15519-v1.0-hybrid TreeBeST001213.E TreeBeST001213.C evm.TU.supercontig_136.25 evm.TU.supercontig_136.26 Tc01_g018860 TreeBeST001213.C TreeBeST001213.E TreeBeST001213.E.a TreeBeST001213.E.a TreeBeST001213.E.a BRADI1G08400 PHYC (MLOC_824) TreeBeST001213.E.a TreeBeST001213.E.a BGIOSGA013571 LOC_Os03g54084 ORGLA03G0314300 OB03G41420 TreeBeST001213.E.a TreeBeST001213.E.a.a PHYC (Sb01g007850) GRMZM2G027493 GRMZM2G345509 phyC2 (GRMZM2G129889) phyC1 (GRMZM2G057935) Si034030m.g GRMZM2G105312 GRMZM2G171949 GSMUA_Achr4G32930_001 GSMUA_Achr4G32940_001 GSMUA_Achr6G00080_001 TreeBeST001213.E TreeBeST001213.C GSMUA_Achr4G32930_001 GSMUA_Achr4G32940_001 TreeBeST001213.E TreeBeST001213.C TreeBeST001213.C TreeBeST001213.C Carubv10004031m.g TreeBeST001213.C 493637 (fgenesh2_kg.7__3070__AT5G35840.1) PHYC (AT5G35840) TreeBeST001213.C Bra039485 (Bra039485) TreeBeST001213.C Tp7g06270 Tp7g06280 Tp7g06270 Tp7g06280 Thhalv10003554m.g evm.TU.supercontig_136.25 evm.TU.supercontig_136.26 TreeBeST000421.L TreeBeST000421.L TreeBeST000421.L AT1G09660 (AT1G09660) 471067 (fgenesh2_kg.1__1021__AT1G09660.1) Carubv10009882m.g TreeBeST000421.L TreeBeST000421.L Thhalv10008323m.g Bra020003 (Bra020003) TreeBeST000611.D.a.b.b TreeBeST000611.D.a.b.b TreeBeST000611.D.a.b.b AT1G09610 (AT1G09610) 919718 (scaffold_100999.1) Carubv10011736m.g TreeBeST000611.D.a.b.b TreeBeST000611.D.a.b.b Tp1g08220 Thhalv10009538m.g TreeBeST003028.a TreeBeST003028.a.f TreeBeST003028.a.f TreeBeST003028.a.f.a AT1G09483 (AT1G09483) 471040 (fgenesh2_kg.1__994__AT1G09470.1) Carubv10009671m.g TreeBeST003028.a.f Tp1g08080 Thhalv10008143m.g Bra020022 (Bra020022) evm.TU.supercontig_48.220 TreeBeST003028.a TreeBeST009563.E.b.b.a.b.a TreeBeST009563.E.b.b.a.b.a TreeBeST009563.E.b.b.a.b.a.a AT1G09490 (AT1G09490) 471042 (fgenesh2_kg.1__996__AT1G09490.1) Carubv10009753m.g TreeBeST009563.E.b.b.a.b.a Tp1g08100 Thhalv10008138m.g Bra020021 (Bra020021) Bra020020 (Bra020020) Bra020019 (Bra020019) TreeBeST004338.A TreeBeST004338.A TreeBeST004338.A TreeBeST004338.A AT1G09450 (AT1G09450) 311988 (fgenesh1_pm.C_scaffold_1000768) Carubv10008644m.g TreeBeST004338.A Tp1g08060 Thhalv10007117m.g evm.TU.supercontig_48.218 GLYMA03G38780 TreeBeST008624.N TreeBeST008624.N TreeBeST008624.N RAB-A2A (AT1G09630) 919721 (scaffold_101002.1) Carubv10010267m.g TreeBeST008624.N TreeBeST008624.N Tp1g08240 Thhalv10008742m.g Bra020006 (Bra020006) TreeBeST001901.A.c.a TreeBeST001901.A.c.a TreeBeST001901.A.c.a.c AT1G09690 (AT1G09690) 471057 (fgenesh2_kg.1__1011__AT1G09590.1) Carubv10010498m.g Carubv10010433m.g TreeBeST001901.A.c.a TreeBeST001901.A.c.a Tp1g08200 Tp1g08280 Bra020009 (Bra020009) Bra020000 (Bra020000) Bra031682 (Bra031682) Bra031673 (Bra031673) Thhalv10008955m.g Thhalv10008951m.g AT1G09470 (AT1G09470) TreeBeST002820.B TreeBeST002820.B TreeBeST002820.B AT1G09520 (AT1G09520) 471047 (fgenesh2_kg.1__1001__AT1G09520.1) Carubv10012528m.g TreeBeST002820.B.b.b Tp1g08120 Thhalv10008580m.g Bra020018 (Bra020018) Bra031667 (Bra031667) TreeBeST002820.C TreeBeST001497.G.a.b.b.b.a AT1G09650 (AT1G09650) 471065 (fgenesh2_kg.1__1019__AT1G09650.1) TreeBeST009559.G.b.a TreeBeST009559.G.b.a AT1G09600 (AT1G09600) Bra020008 (Bra020008) Bra031674 (Bra031674) GRMZM2G418223 evm.TU.supercontig_136.16 evm.TU.supercontig_136.16 TreeBeST009563.E.b.b.b TreeBeST009563.E.b.b.b TreeBeST009563.E.b.b.b AT1G09500 (AT1G09500) 471045 (fgenesh2_kg.1__999__AT1G09500.1) Carubv10009736m.g TreeBeST009563.E.b.b.b.a Thhalv10008208m.g Bra031666 (Bra031666)