Reference Gene Name: TUBB1 (GRMZM2G164696) Ensembl Phytozome
Reference Species : Zea mays Plantlist Tropicos
Root Species : Magnoliophyta (~163 million years)Tropicos 		Magnoliophyta Link Wikipedia to Zea mays Link Ensembl
×2 ÷2 Center the view on the reference gene Shift 1 gene on the left Shift 5 genes on the left Shift 1 gene on the right Shift 5 genes on the right Zoom out Show 1 less gene on each side Show 1 more gene on each side Show half the number of genes on each side Show twice more genes on each side Zoom in

A more recent version of genomicus is available here

 
Magnoliophyta duplication node (click to collapse) Magnoliophyta (~163 My ago) Click to show this node (Magnoliophyta) Magnoliophyta duplication node (click to collapse) Click to show this node (Magnoliophyta) Magnoliophyta duplication node (click to collapse) Click to show this node (Magnoliophyta) Magnoliophyta duplication node (click to collapse) Click to show this node (Magnoliophyta) Magnoliophyta duplication node (click to collapse) Click to hide this line (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Magnoliophyta (~163 My ago) Click to hide this line (Commelinids) Commelinids speciation node (click to collapse) Commelinids (~100 My ago) Click to hide this line (Poaceae) Poaceae speciation node (click to collapse) Poaceae (~41 My ago) - block_4 TreeBeST008660.E.d TreeBeST001476.B EPlGT00140000007314.B TreeBeST001285.B TreeBeST008785.G.b.b.a.b.b TreeBeST000890.F.c.b TreeBeST002065.d.a TreeBeST000142.G TreeBeST000597.F.g.a TreeBeST000283.N.l.a TreeBeST008918.E.h.b TreeBeST008785.G.b.b.b.b.b.b.a.a TreeBeST003874.B TreeBeST000603.C.c.a TreeBeST001826.C TreeBeST006752 TreeBeST004962 TreeBeST000338.C.b TreeBeST005876.d TreeBeST000262.H.a TreeBeST002996 TreeBeST008599.D.a TreeBeST001568.B.d Click to hide this line (Panicoideae) Panicoideae speciation node (click to collapse) Panicoideae - block_1 TreeBeST001476.B EPlGT00140000007314.B TreeBeST001285.B TreeBeST008785.G.b.b.a.b.b TreeBeST000890.F.c.b TreeBeST002065.d.a TreeBeST000142.G TreeBeST000283.N.l.a TreeBeST008918.E.h.b TreeBeST008785.G.b.b.b.a.b TreeBeST008785.G.b.b.b.b.b.b.a.a TreeBeST003874.B TreeBeST001678.R TreeBeST008584.G.d.b TreeBeST001826.C TreeBeST004962 TreeBeST000338.C.b TreeBeST000189.G TreeBeST005876.d TreeBeST000262.H.a Click to hide this line (Andropogoneae) Andropogoneae speciation node (click to collapse) Andropogoneae (~9 My ago) - block_1 TreeBeST005876.d TreeBeST000189.G TreeBeST000338.C.b TreeBeST001826.C TreeBeST008584.G.d.b TreeBeST001678.R.a TreeBeST003874.B TreeBeST008785.G.b.b.b.b.b.b.a.a TreeBeST008785.G.b.b.b.a.b TreeBeST008918.E.h.b TreeBeST000283.N.l.a TreeBeST000142.G TreeBeST002065.d.a TreeBeST000890.F.c.b TreeBeST008785.G.b.b.a.b.b EPlGT00140000007314.B TreeBeST001476.B TreeBeST008660.E.d.a Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:1 Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:1 SB01G050180 (Sb01g050180) SB01G050190 (Sb01g050190) SB01G050200 (Sb01g050200) SB01G050210 (Sb01g050210) SB01G050190 (Sb01g050220) SB01G050230 (Sb01g050230) SB01G050240 (Sb01g050240) Sb01g050250 SB01G050270 (Sb01g050270) SB01G050285 (Sb01g050285) SB01G050300 (Sb01g050300) SB01G050320 (Sb01g050320) SB01G050336 (Sb01g050336) SB01G050340 (Sb01g050340) SB01G050343 (Sb01g050343) SB01G050346 (Sb01g050346) SB01G050350 (Sb01g050350) SB01G050400 (Sb01g050400) SB01G050410 (Sb01g050410) Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - scaffold_9 Si036293m.g Si037106m.g Si034582m.g Si038117m.g Si039870m.g Si039613m.g Si035973m.g Si037932m.g Si034173m.g Si039060m.g Si034951m.g Si038316m.g Si040285m.g Si036654m.g Si037023m.g Si035591m.g Si033833m.g Si039096m.g Si036411m.g Si036404m.g Si038847m.g Si040588m.g Si037161m.g Click to hide this line (BEP clade) BEP clade speciation node (click to collapse) BEP clade (~40 My ago) - block_4 TreeBeST008660.E.d TreeBeST001476.B EPlGT00140000007314.B TreeBeST005235 TreeBeST008785.G.b.b.a.b.b TreeBeST000890.F.c.b TreeBeST002065.d.a TreeBeST000142.G TreeBeST000597.F.g.a TreeBeST000283.N.l.a TreeBeST008918.E.h.b TreeBeST008785.G.b.b.b.a.a TreeBeST008785.G.b.b.b.b.b.b.a.a TreeBeST003874.B TreeBeST001678.L.b TreeBeST001804.B.c TreeBeST000603.C.c.a TreeBeST001826.C TreeBeST006752 TreeBeST004962 TreeBeST000338.C.b TreeBeST009538.K Click to show this node (Pooideae) Pooideae speciation node (click to collapse) Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:1 psbD (BRADI1G78076) psbC (BRADI1G78082) BRADI1G78120 BRADI1G78130 BRADI1G78140 BRADI1G78160 BRADI1G78165 BRADI1G78170 BRADI1G78200 BRADI1G78245 BRADI1G78260 BRADI1G78270 BRADI1G78300 BRADI1G78310 BRADI1G78320 BRADI1G78330 BRADI1G78340 BRADI1G78350 Click to hide this line (Oryza) Oryza speciation node (click to collapse) Oryza (~40 My ago) - block_4 EPlGT00140000007314.B TreeBeST005235 TreeBeST001285.B TreeBeST008785.G.b.b.a.b.a.b.a TreeBeST008785.G.b.b.a.b.a.a.a.b TreeBeST000890.F.c.b TreeBeST002065.d.a TreeBeST000142.G TreeBeST008835.C.f.a.a.a.b.a.b.a.b.a.a.b TreeBeST008835.C.f.a.a.a.b.a.b.a.b.a.a.a TreeBeST008918.E.h.b EPlGT00140000017504 TreeBeST008785.G.b.b.b.a.a EPlGT00140000008878.D TreeBeST008785.G.b.b.b.b.b.b.a.a TreeBeST003874.B.k.a TreeBeST001678.L.b TreeBeST001804.B.c TreeBeST001826.C TreeBeST006752 TreeBeST004962 Click to hide this line (Oryza sativa) Oryza sativa speciation node (click to collapse) Oryza sativa - block_7 TreeBeST001678.L.b TreeBeST003874.B.k.a TreeBeST008785.G.b.b.b.b.b.b.a.a EPlGT00140000008878.D TreeBeST008785.G.b.b.b.a.a EPlGT00140000017504 TreeBeST008918.E.h.b TreeBeST008835.C.f.a.a.a.b.a.b.a.b.a.a.a TreeBeST008835.C.f.a.a.a.b.a.b.a.b.a.a.b EPlGT00140000013234 EPlGT00140000026161 TreeBeST000225.H.e EPlGT00140000000429.G.b.b TreeBeST000142.G EPlGT00140000034821 TreeBeST002065.d.a TreeBeST000890.F.c.b TreeBeST001285.B TreeBeST005235.c EPlGT00140000007314.B TreeBeST001476.B.j Click to hide this line (Oryza sativa Indica Group) Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:3 OS03G0102700 (BGIOSGA011657) OsI_09628 (BGIOSGA011658) OsI_09629 (BGIOSGA011659) LTP1 (BGIOSGA011660) OsI_09631 (BGIOSGA011661) OsI_09632 (BGIOSGA011662) OsI_09633 (BGIOSGA011621) OsI_09634 (BGIOSGA011620) OsI_09635 (BGIOSGA011663) OsI_09638 (BGIOSGA011666) OsI_09639 (BGIOSGA011619) OsI_09640 (BGIOSGA011618) OsI_09641 (BGIOSGA011617) OS03G0105700 (BGIOSGA011616) OsI_09645 (BGIOSGA011668) OS03G0106200 (BGIOSGA011613) OSJNBA0009C08.14 (BGIOSGA011611) OsI_09650 (BGIOSGA011669) OS03G0106800 (BGIOSGA011610) OsI_09652 (BGIOSGA011609) OsI_09653 (BGIOSGA011608) OSJNBA0009C08.16 (BGIOSGA011670) OsI_09655 (BGIOSGA011607) Click to hide this line (Oryza sativa Japonica Group) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:3 LOC_Os03g01380 LOC_Os03g01390 LOC_Os03g01400 LOC_Os03g01410 LOC_Os03g01420 LOC_Os03g01430 LOC_Os03g01436 LOC_Os03g01442 LOC_Os03g01450 LOC_Os03g01460 LOC_Os03g01470 LOC_Os03g01480 LOC_Os03g01490 LOC_Os03g01500 LOC_Os03g01520 LOC_Os03g01540 LOC_Os03g01560 LOC_Os03g01580 LOC_Os03g01600 LOC_Os03g01610 LOC_Os03g01614 LOC_Os03g01620 LOC_Os03g01630 LOC_Os03g01640 LOC_Os03g01650 Click to hide this line (Oryza glaberrima) Oryza glaberrima terminal node Oryza glaberrima - Chr:3 ORGLA03G0000600 ORGLA03G0000700 ORGLA03G0000800 ORGLA03G0000900 ORGLA03G0001000 ORGLA03G0001100 ORGLA03G0001200 ORGLA03G0001300 ORGLA03G0001400 ORGLA03G0001500 ORGLA03G0001600 ORGLA03G0001700 ORGLA03G0001800 ORGLA03G0002200 ORGLA03G0002500 ORGLA03G0002600 ORGLA03G0002800 ORGLA03G0002900 ORGLA03G0003000 ORGLA03G0003100 ORGLA03G0003200 Click to hide this line (Musa acuminata subsp malaccensis) Musa acuminata subsp malaccensis terminal node Musa acuminata subsp malaccensis - Chr:4 GSMUA_Achr4G11830_001 GSMUA_Achr4G11840_001 GSMUA_Achr4G11850_001 GSMUA_Achr4G11860_001 GSMUA_Achr4G11870_001 GSMUA_Achr4G11880_001 GSMUA_Achr4G11890_001 GSMUA_Achr4G11900_001 GSMUA_Achr4G11910_001 GSMUA_Achr4G11920_001 GSMUA_Achr4G11930_001 GSMUA_Achr4G11940_001 GSMUA_Achr4G11950_001 GSMUA_Achr4G11960_001 GSMUA_Achr4G11970_001 GSMUA_Achr4G11990_001 GSMUA_Achr4G12000_001 GSMUA_Achr4G12010_001 GSMUA_Achr4G12020_001 GSMUA_Achr4G12030_001 GSMUA_Achr4G12040_001 GSMUA_Achr4G12050_001 GSMUA_Achr4G12060_001 GSMUA_Achr4G12070_001 GSMUA_Achr4G12080_001 GSMUA_Achr4G12090_001 GSMUA_Achr4G12100_001 GSMUA_Achr4G12110_001 GSMUA_Achr4G12120_001 GSMUA_Achr4G12130_001 Click to hide this line (Dicotyledones) Dicotyledones speciation node (click to collapse) Dicotyledones (~110 My ago) - block_185 TreeBeST000207.F TreeBeST001756.D TreeBeST000848.H TreeBeST004672.B TreeBeST001100.A.a.b.b TreeBeST000525.F TreeBeST001480.D.b TreeBeST003760 TreeBeST008624.L.b TreeBeST000843.D TreeBeST008575.J TreeBeST001795.B TreeBeST008581.F.a.a TreeBeST005718.A TreeBeST001547.G TreeBeST008886.N TreeBeST005968 Click to show this node (Solanum) Solanum duplication node (click to collapse) Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum (~3 My ago) - block_25 TreeBeST008761.N.a.a.a TreeBeST001425.A.a TreeBeST007239 TreeBeST000262.Q.a TreeBeST007846 TreeBeST000262.Q.b.a TreeBeST000262.Q.b.b.a TreeBeST000091.E.a.a.a TreeBeST000036.P.a.a.a TreeBeST001541.A.b TreeBeST000022.DB.g TreeBeST000959.J.a TreeBeST000197.DB TreeBeST003424.B TreeBeST002155.A.a.a.b.b.b TreeBeST001226.C TreeBeST001100.A.a.b.b.a TreeBeST003064.a.a TreeBeST001036.A.b.b.a.a.b.b TreeBeST008624.L.b.a TreeBeST008575.J.a TreeBeST001795.B TreeBeST000267.G.b.b.a.b.b TreeBeST000267.G.b.b.a.a TreeBeST008581.F.a.a TreeBeST005718.A TreeBeST008910.M TreeBeST001547.G TreeBeST008886.O TreeBeST008886.N Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch06 PGSC0003DMG400004163 (PGSC0003DMG400004163) PGSC0003DMG400004162 (PGSC0003DMG400004162) PGSC0003DMG400041025 (PGSC0003DMG400041025) PGSC0003DMG400026869 (PGSC0003DMG400026869) PGSC0003DMG400019952 (PGSC0003DMG400019952) PGSC0003DMG401020840 (PGSC0003DMG401020840) PGSC0003DMG402020840 (PGSC0003DMG402020840) PGSC0003DMG403020840 (PGSC0003DMG403020840) PGSC0003DMG404020840 (PGSC0003DMG404020840) PGSC0003DMG400020844 (PGSC0003DMG400020844) PGSC0003DMG400020845 (PGSC0003DMG400020845) PGSC0003DMG400020846 (PGSC0003DMG400020846) PGSC0003DMG400020847 (PGSC0003DMG400020847) PGSC0003DMG400020848 (PGSC0003DMG400020848) PGSC0003DMG400020849 (PGSC0003DMG400020849) PGSC0003DMG400020842 (PGSC0003DMG400020842) PGSC0003DMG400020855 (PGSC0003DMG400020855) PGSC0003DMG400020843 (PGSC0003DMG400020843) PGSC0003DMG400020851 (PGSC0003DMG400020851) PGSC0003DMG400038646 (PGSC0003DMG400038646) PGSC0003DMG400020852 (PGSC0003DMG400020852) PGSC0003DMG400020835 (PGSC0003DMG400020835) PGSC0003DMG400020834 (PGSC0003DMG400020834) PGSC0003DMG400020833 (PGSC0003DMG400020833) PGSC0003DMG400020832 (PGSC0003DMG400020832) PGSC0003DMG400020825 (PGSC0003DMG400020825) PGSC0003DMG400020831 (PGSC0003DMG400020831) PGSC0003DMG400020824 (PGSC0003DMG400020824) PGSC0003DMG400020830 (PGSC0003DMG400020830) PGSC0003DMG400042351 (PGSC0003DMG400042351) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:6 Solyc06g005760.1 Solyc06g005770.1 Solyc06g005780.1 Solyc06g005790.2 Solyc06g005800.2 Solyc06g005810.2 Solyc06g005820.2 Solyc06g005830.1 Solyc06g005840.2 Solyc06g005850.2 Solyc06g005860.1 Solyc06g005870.1 Solyc06g005880.2 Solyc06g005890.2 Solyc06g005900.2 Solyc06g005920.1 Solyc06g005930.1 Solyc06g005940.2 Solyc06g005950.2 Solyc06g005960.2 Solyc06g005970.2 Solyc06g005980.2 Solyc06g005990.2 Solyc06g006000.2 Solyc06g006010.1 Solyc06g006020.1 Solyc06g006030.1 Solyc06g006040.1 Solyc06g006050.1 Solyc06g006060.1 Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum (~3 My ago) - block_7 TreeBeST000843.D TreeBeST008624.L.b.b TreeBeST003760 TreeBeST002891.A TreeBeST002425.B TreeBeST001480.D.b TreeBeST003174.A TreeBeST008794.H.a TreeBeST008794.H.b.a.b TreeBeST008794.H.b.a.a TreeBeST000525.F TreeBeST001100.A.a.b.b.b TreeBeST004672.B TreeBeST000979.A.a TreeBeST000848.H TreeBeST002718.B.a TreeBeST000297.I TreeBeST001457.A.a TreeBeST001457.A.b TreeBeST001855.A TreeBeST000946.E.b.b.b TreeBeST000946.E.b.a TreeBeST008609.D.a.a.a TreeBeST008802.C.a TreeBeST009595.D.a TreeBeST000022.DB.h TreeBeST004684.A.a TreeBeST006813.b TreeBeST008648.G Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch06 PGSC0003DMG400030336 (PGSC0003DMG400030336) PGSC0003DMG400030485 (PGSC0003DMG400030485) PGSC0003DMG400030337 (PGSC0003DMG400030337) PGSC0003DMG400030426 (PGSC0003DMG400030426) PGSC0003DMG400030427 (PGSC0003DMG400030427) PGSC0003DMG400030338 (PGSC0003DMG400030338) PGSC0003DMG400030339 (PGSC0003DMG400030339) PGSC0003DMG400030340 (PGSC0003DMG400030340) PGSC0003DMG400030341 (PGSC0003DMG400030341) PGSC0003DMG400037544 (PGSC0003DMG400037544) PGSC0003DMG400030343 (PGSC0003DMG400030343) PGSC0003DMG400030428 (PGSC0003DMG400030428) PGSC0003DMG400030429 (PGSC0003DMG400030429) PGSC0003DMG400030430 (PGSC0003DMG400030430) PGSC0003DMG400030344 (PGSC0003DMG400030344) PGSC0003DMG400030432 (PGSC0003DMG400030432) PGSC0003DMG400030345 (PGSC0003DMG400030345) PGSC0003DMG400030433 (PGSC0003DMG400030433) PGSC0003DMG400030434 (PGSC0003DMG400030434) PGSC0003DMG400030346 (PGSC0003DMG400030346) PGSC0003DMG400030435 (PGSC0003DMG400030435) PGSC0003DMG400030436 (PGSC0003DMG400030436) PGSC0003DMG400030437 (PGSC0003DMG400030437) PGSC0003DMG400030438 (PGSC0003DMG400030438) PGSC0003DMG400030347 (PGSC0003DMG400030347) PGSC0003DMG400030348 (PGSC0003DMG400030348) PGSC0003DMG400030439 (PGSC0003DMG400030439) PGSC0003DMG400030486 (PGSC0003DMG400030486) PGSC0003DMG400030440 (PGSC0003DMG400030440) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:6 Solyc06g076490.2 Solyc06g076500.1 Solyc06g076510.2 HSP17.7 (Solyc06g076520.1) Solyc06g076530.1 SL20.1SHSP (Solyc06g076540.1) Solyc06g076550.2 HSP17.6 (Solyc06g076560.1) SL20.0SHSP (Solyc06g076570.1) Solyc06g076580.1 Solyc06g076600.1 Solyc06g076610.2 Solyc06g076620.2 Solyc06g076630.2 Solyc06g076650.2 PCNA (Solyc06g076660.2) Solyc06g076670.2 Solyc06g076680.2 Solyc06g076690.2 Solyc06g076700.1 Solyc06g076710.1 Solyc06g076740.1 Solyc06g076750.2 Solyc06g076760.1 Solyc06g076770.2 Solyc06g076780.2 Solyc06g076790.1 Solyc06g076800.2 Solyc06g076810.1 Click to show this node (rosids) rosids speciation node (click to collapse) Click to show this node (eurosids) eurosids speciation node (click to collapse) Click to show this node (Anc arath cacao) Anc arath cacao speciation node (click to collapse) Click to hide this line (Brassicales) Brassicales speciation node (click to collapse) Brassicales - block_1055 TreeBeST000848.H.b Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae (~16 My ago) - block_4 TreeBeST000984.A.d.a.b.b.a.b.b TreeBeST008665.C.b.b.b.a.a TreeBeST002973.B.b.a TreeBeST000959.K TreeBeST000959.C.a.b TreeBeST001763.C.c TreeBeST000587.G.b.b.b TreeBeST000597.E TreeBeST000207.D.f TreeBeST004923 TreeBeST001541.A.b.a.b TreeBeST001457.A TreeBeST002137.B.b.a.b.b.b TreeBeST002718.G.c.b TreeBeST000848.H.b TreeBeST001538.A TreeBeST003064.b.c TreeBeST002123.A TreeBeST008794.E.b.a.a.a.b.a.b.d.b.b TreeBeST008598.G.b.h.b.a.a.b TreeBeST008598.G.b.h.b.a.b.a TreeBeST008598.G.b.h.b.a.b.b.a TreeBeST008598.G.b.h.a.a TreeBeST008598.G.b.g TreeBeST000843.D.a EPlGT00140000010525 TreeBeST008689.P.a.b TreeBeST000171.Q.b.b.a.f.b TreeBeST008581.D.a.a.b.a.b.a.b.b.b Click to hide this line (Camelineae) Camelineae speciation node (click to collapse) Camelineae - block_5 TreeBeST008581.D.a.a.a.d.a TreeBeST008581.D.a.a.a.d.b.b TreeBeST008581.D.a.a.a.d.b.a.a TreeBeST000171.Q.b.b.a.f.b TreeBeST008689.P.b TreeBeST008598.G.b.h.a.a.b TreeBeST008598.G.b.h.b.a.b.b.a TreeBeST008598.G.b.h.b.a.b.a TreeBeST008598.G.b.h.b.a.a.b TreeBeST008598.G.b.h.b.a.a.a TreeBeST008794.E.b.a.a.a.b.a.b.d.b.b TreeBeST002123.A TreeBeST003064.b.c TreeBeST001538.A TreeBeST000848.H.b TreeBeST002718.G.c.b TreeBeST002137.B.b.a.b.b.b TreeBeST001457.A TreeBeST001199.b.b.a.b.b.b.a.b.a.a.a.b.a TreeBeST001541.A.b.a.b TreeBeST004923 TreeBeST004514.B.a.a TreeBeST000207.D.f TreeBeST000597.E TreeBeST000587.G.b.b.b TreeBeST000959.C.a.b TreeBeST000959.K TreeBeST002973.B.b.a TreeBeST008665.C.b.b.b.a.a Click to hide this line (Capsella rubella) Capsella rubella terminal node Capsella rubella - scaffold_4 Carubv10023247m.g Carubv10023998m.g Carubv10024175m.g Carubv10024003m.g Carubv10023960m.g Carubv10023291m.g Carubv10024637m.g Carubv10025711m.g Carubv10023969m.g Carubv10024599m.g Carubv10024210m.g Carubv10023772m.g Carubv10024427m.g Carubv10024331m.g Carubv10023125m.g Carubv10025581m.g Carubv10023862m.g Carubv10024807m.g Carubv10024222m.g Carubv10024826m.g Carubv10025484m.g Carubv10024918m.g Carubv10025464m.g Carubv10024856m.g Carubv10022691m.g Carubv10022806m.g Carubv10024771m.g Carubv10025547m.g Carubv10023405m.g Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis (~5 My ago) - block_5 TreeBeST000442.A.f.b.b.c TreeBeST008575.J.f.a TreeBeST000843.D.a TreeBeST008598.G.b.g TreeBeST008598.G.b.h.a.b TreeBeST008598.G.b.h.a.a.b TreeBeST008598.G.b.h.b.a.b.b.a TreeBeST008598.G.b.h.b.a.b.a TreeBeST008598.G.b.h.b.a.a.b TreeBeST008598.G.b.h.b.a.a.a TreeBeST008794.E.b.a.a.a.b.a.b.d.b.b TreeBeST002123.A TreeBeST003064.b.c TreeBeST001538.A TreeBeST000848.H.b TreeBeST002718.G.c.a TreeBeST002137.B.b.a.b.b.b TreeBeST001457.A TreeBeST001199.b.b.a.b.b.b.a.b.a.a.a.b.a.d TreeBeST001541.A.b.a.b TreeBeST004923 TreeBeST004514.B.a.a TreeBeST000207.D.f TreeBeST000597.E TreeBeST000587.G.b.b.b TreeBeST001763.C.c TreeBeST000959.K TreeBeST002973.B.b.a TreeBeST008665.C.b.b.b.a.a.b Click to hide this line (Arabidopsis lyrata subsp lyrata) Arabidopsis lyrata subsp lyrata terminal node Arabidopsis lyrata subsp lyrata - Chr:4 320709 (fgenesh1_pm.C_scaffold_4000766) 481860 (fgenesh2_kg.4__920__AT2G29440.1) 481861 (fgenesh2_kg.4__921__AT2G29450.1) 320712 (fgenesh1_pm.C_scaffold_4000769) 320713 (fgenesh1_pm.C_scaffold_4000770) 933420 (scaffold_401408.1) 481863 (fgenesh2_kg.4__923__AT2G29470.1) 933422 (scaffold_401410.1) 481864 (fgenesh2_kg.4__924__AT2G29490.1) 320719 (fgenesh1_pm.C_scaffold_4000776) 481866 (fgenesh2_kg.4__926__AT2G29500.1) 481869 (fgenesh2_kg.4__929__AT2G29525.1) 933429 (scaffold_401417.1) 900722 (Al_scaffold_0004_1372) 900724 (Al_scaffold_0004_1374) 481872 (fgenesh2_kg.4__932__AT2G29570.1) 344719 (fgenesh1_pg.C_scaffold_4001061) 481873 (fgenesh2_kg.4__933__AT2G29590.1) 933437 (scaffold_401425.1) 320730 (fgenesh1_pm.C_scaffold_4000787) 900732 (Al_scaffold_0004_1382) 344726 (fgenesh1_pg.C_scaffold_4001068) 933443 (scaffold_401431.1) 481876 (fgenesh2_kg.4__936__AT2G29630.2) 481877 (fgenesh2_kg.4__937__AT2G29640.1) 481880 (fgenesh2_kg.4__940__AT2G29650.1) 481881 (fgenesh2_kg.4__941__AT2G29660.1) 933449 (scaffold_401437.1) 933450 (scaffold_401438.1) Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:2 MTPB1 (AT2G29410) GSTU7 (AT2G29420) AT2G29430 (AT2G29430) ATGSTU6 (AT2G29440) ATGSTU5 (AT2G29450) AT2G29452 (AT2G29452) GST22 (AT2G29460) ATGSTU3 (AT2G29470) ATGSTU2 (AT2G29480) ATGSTU1 (AT2G29490) AT2G29500 (AT2G29500) AtIPCS3 (AT2G29525) TIM10 (AT2G29530) ATRPAC14 (AT2G29540) ENOC (AT2G29560) PCNA2 (AT2G29570) AT2G29580 (AT2G29580) AT2G29590 (AT2G29590) AT2G29600 (AT2G29600) AT2G29605 (AT2G29605) AT2G29620 (AT2G29620) AT2G29628 (AT2G29628) THIC (AT2G29630) JOSL (AT2G29640) ANTR1 (AT2G29650) AT2G29654 (AT2G29654) AT2G29660 (AT2G29660) AT2G29670 (AT2G29670) AT2G29679 (AT2G29679) Click to hide this line (Brassiceae) Brassiceae speciation node (click to collapse) Brassiceae - block_5 TreeBeST008581.D.a.a.a.d TreeBeST008581.D.a.a.b.a.b.a.b.b.b.b.a TreeBeST000171.Q.b.b.a.f.b TreeBeST008689.P.a.b TreeBeST000843.D.a TreeBeST008598.G.b.g TreeBeST008598.G.b.h.a.a.d TreeBeST008598.G.b.h.b.a.b.b.a TreeBeST008598.G.b.h.b.a.b.a TreeBeST008598.G.b.h.b.a.a.b TreeBeST008794.E.b.a.a.a.b.a.b.d.b.b TreeBeST002123.A TreeBeST003064.b.c TreeBeST001538.A.c TreeBeST000848.H.b TreeBeST002718.G.c.b TreeBeST002137.B.b.a.b.b.b TreeBeST001457.A TreeBeST001541.A.b.a.b TreeBeST004923 TreeBeST004514.B.a.b TreeBeST000207.D.f TreeBeST000597.E.c TreeBeST000597.E.d TreeBeST000587.G.b.b.b TreeBeST001763.C.c TreeBeST000959.C.a.b TreeBeST000959.K TreeBeST002973.B.b.a Click to hide this line (Eutremeae) Eutremeae speciation node (click to collapse) Eutremeae - block_6 TreeBeST008665.C.b.b.b.a.a TreeBeST002973.B.b.a TreeBeST000959.K TreeBeST000959.C.a.b TreeBeST000587.G.b.b.b TreeBeST000597.E.d TreeBeST000597.E.c TreeBeST000207.D.f TreeBeST004514.B.a.b TreeBeST004923 TreeBeST001541.A.b.a.b TreeBeST001457.A TreeBeST002137.B.b.a.b.b.b TreeBeST002718.G.c.b TreeBeST000848.H.b TreeBeST001538.A.c TreeBeST003064.b.d TreeBeST001538.A.d TreeBeST003064.b.c TreeBeST002123.A TreeBeST008794.E.b.a.a.a.b.a.b.d.b.b TreeBeST000048.A.b.b.b.b.a.b.b.b.a.c.b TreeBeST005968 TreeBeST007433.a.b TreeBeST008899.D.g TreeBeST002981.b.b.a TreeBeST000127.KB.b.b TreeBeST003314.a.a.b.b.b TreeBeST000061.I.b.b.a.a Click to hide this line (Thellungiella parvula) Thellungiella parvula terminal node Thellungiella parvula - Chr:ch4-6 Tp4g12130 Tp4g12140 Tp4g12150 Tp4g12160 Tp4g12170 Tp4g12180 Tp4g12190 Tp4g12200 Tp4g12210 Tp4g12220 Tp4g12230 Tp4g12250 Tp4g12260 Tp4g12270 Tp4g12290 Tp4g12300 Tp4g12310 Tp4g12320 Tp4g12330 Tp4g12340 Tp4g12350 Tp4g12370 Tp4g12360 Tp4g12380 Tp4g12390 Tp4g12400 Tp4g12410 Tp4g12420 Tp4g12430 Click to hide this line (Thellungiella halophila) Thellungiella halophila terminal node Thellungiella halophila - scaffold_10 Thhalv10017639m.g Thhalv10016787m.g Thhalv10017210m.g Thhalv10017212m.g Thhalv10017875m.g Thhalv10017209m.g Thhalv10017840m.g Thhalv10017257m.g Thhalv10017193m.g Thhalv10017660m.g Thhalv10017313m.g Thhalv10017029m.g Thhalv10017490m.g Thhalv10017434m.g Thhalv10016594m.g Thhalv10017099m.g Thhalv10016591m.g Thhalv10017356m.g Thhalv10017594m.g Thhalv10017876m.g Thhalv10016370m.g Thhalv10017013m.g Thhalv10016491m.g Thhalv10016804m.g Thhalv10016175m.g Thhalv10017669m.g Thhalv10017528m.g Thhalv10016462m.g Thhalv10016540m.g Click to show this node (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis duplication node (click to collapse) Click to hide this line (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A05 Bra018364 (Bra018364) Bra018365 (Bra018365) Bra018366 (Bra018366) Bra018367 (Bra018367) Bra018368 (Bra018368) Bra018369 (Bra018369) Bra018370 (Bra018370) Bra018371 (Bra018371) Bra018372 (Bra018372) Bra018373 (Bra018373) Bra018374 (Bra018374) Bra018375 (Bra018375) Bra018376 (Bra018376) Bra018377 (Bra018377) Bra018378 (Bra018378) Bra018380 (Bra018380) Bra018381 (Bra018381) Bra018382 (Bra018382) Bra018383 (Bra018383) Bra018384 (Bra018384) Bra018385 (Bra018385) Bra018386 (Bra018386) Bra018387 (Bra018387) Bra018388 (Bra018388) Bra018389 (Bra018389) Bra018390 (Bra018390) Bra018391 (Bra018391) Bra018392 (Bra018392) Bra018393 (Bra018393) Bra018394 (Bra018394) Click to hide this line (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A04 Bra039972 (Bra039972) Bra039973 (Bra039973) Bra039974 (Bra039974) Bra039975 (Bra039975) Bra039976 (Bra039976) Bra039977 (Bra039977) Bra039978 (Bra039978) Bra039979 (Bra039979) Bra039980 (Bra039980) Bra039981 (Bra039981) Bra039982 (Bra039982) Bra039983 (Bra039983) Bra039984 (Bra039984) Bra039985 (Bra039985) Bra039986 (Bra039986) Bra039988 (Bra039988) Bra039989 (Bra039989) Bra039990 (Bra039990) Bra039991 (Bra039991) Bra039992 (Bra039992) Bra039993 (Bra039993) Bra039994 (Bra039994) Bra039995 (Bra039995) Bra039996 (Bra039996) Bra039997 (Bra039997) Bra039998 (Bra039998) Bra021599 (Bra021599) Bra021600 (Bra021600) Bra021601 (Bra021601) Click to hide this line (Carica papaya) Carica papaya terminal node Carica papaya - Chr:supercontig_112 evm.TU.supercontig_112.77 evm.TU.supercontig_112.78 evm.TU.supercontig_112.79 evm.TU.supercontig_112.80 evm.TU.supercontig_112.81 evm.TU.supercontig_112.82 evm.TU.supercontig_112.83 evm.TU.supercontig_112.84 evm.TU.supercontig_112.85 evm.TU.supercontig_112.86 evm.TU.supercontig_112.87 evm.TU.supercontig_112.88 evm.TU.supercontig_112.89 evm.TU.supercontig_112.90 evm.TU.supercontig_112.91 evm.TU.supercontig_112.93 evm.TU.supercontig_112.94 evm.TU.supercontig_112.95 evm.TU.supercontig_112.96 evm.TU.supercontig_112.97 Click to show this node (Magnoliophyta) Magnoliophyta duplication node (click to collapse) Click to hide this line (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Magnoliophyta (~163 My ago) Click to show this node (Commelinids) Commelinids speciation node (click to collapse) Click to show this node (Poaceae) Poaceae speciation node (click to collapse) Click to show this node (BEP clade) BEP clade speciation node (click to collapse) Click to show this node (Pooideae) Pooideae speciation node (click to collapse) Click to hide this line (Hordeum vulgare subsp vulgare) Hordeum vulgare subsp vulgare terminal node Hordeum vulgare subsp vulgare - Chr:4 MLOC_51915 MLOC_81773 MLOC_16300 MLOC_72818 MLOC_61795 MLOC_10843 MLOC_22160 MLOC_33809 MLOC_24239 MLOC_81936 MLOC_57352 MLOC_48416 MLOC_7409 Click to hide this line (Dicotyledones) Dicotyledones speciation node (click to collapse) Dicotyledones (~110 My ago) Click to show this node (Solanum) Solanum duplication node (click to collapse) Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum (~3 My ago) - block_11 TreeBeST008589.K.b.a.a.a TreeBeST000329.A.a.a TreeBeST000939.F.b.a TreeBeST005933 TreeBeST000895.B.a.b TreeBeST000895.B.a.a.b TreeBeST000808.A.b.a TreeBeST002476.B.c.a.a TreeBeST008802.C.b.a.a TreeBeST004692.b TreeBeST001855.B.a TreeBeST004090.b.a TreeBeST008587.N.a TreeBeST001720.A.b TreeBeST001720.A.a TreeBeST002155.A.a.a.a.a TreeBeST000525.D.a TreeBeST002123.B.a TreeBeST001036.A.a.b TreeBeST001480.B.a TreeBeST008598.F.b TreeBeST008764.A.b.a.b TreeBeST008764.A.b.a.a TreeBeST001143.D.b TreeBeST002773.C.b TreeBeST000403.Q.b TreeBeST000175.G.a.b.a.a.a.a.b TreeBeST008583.A.a.a.a.b.a TreeBeST000349.E EPlGT00160000039852.D Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch10 PGSC0003DMG400011097 (PGSC0003DMG400011097) PGSC0003DMG400011096 (PGSC0003DMG400011096) PGSC0003DMG402011095 (PGSC0003DMG402011095) PGSC0003DMG401011095 (PGSC0003DMG401011095) PGSC0003DMG400011093 (PGSC0003DMG400011093) PGSC0003DMG400011091 (PGSC0003DMG400011091) PGSC0003DMG400011019 (PGSC0003DMG400011019) PGSC0003DMG400011090 (PGSC0003DMG400011090) PGSC0003DMG400011018 (PGSC0003DMG400011018) PGSC0003DMG400011017 (PGSC0003DMG400011017) PGSC0003DMG400037745 (PGSC0003DMG400037745) PGSC0003DMG400038189 (PGSC0003DMG400038189) PGSC0003DMG400011089 (PGSC0003DMG400011089) PGSC0003DMG400041963 (PGSC0003DMG400041963) PGSC0003DMG400011016 (PGSC0003DMG400011016) PGSC0003DMG400011087 (PGSC0003DMG400011087) PGSC0003DMG400011015 (PGSC0003DMG400011015) PGSC0003DMG400011014 (PGSC0003DMG400011014) PGSC0003DMG400011086 (PGSC0003DMG400011086) PGSC0003DMG400011013 (PGSC0003DMG400011013) PGSC0003DMG400011012 (PGSC0003DMG400011012) PGSC0003DMG400011085 (PGSC0003DMG400011085) PGSC0003DMG400011084 (PGSC0003DMG400011084) PGSC0003DMG400011083 (PGSC0003DMG400011083) PGSC0003DMG400011011 (PGSC0003DMG400011011) PGSC0003DMG400011082 (PGSC0003DMG400011082) PGSC0003DMG400011081 (PGSC0003DMG400011081) PGSC0003DMG400011080 (PGSC0003DMG400011080) PGSC0003DMG400011079 (PGSC0003DMG400011079) PGSC0003DMG400011010 (PGSC0003DMG400011010) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:10 Solyc10g084870.1 Solyc10g084880.2 Solyc10g084890.1 Solyc10g084900.1 Solyc10g084910.1 Solyc10g084920.1 Solyc10g084930.1 Solyc10g084940.1 Solyc10g084950.1 Solyc10g084960.1 Solyc10g084970.1 Solyc10g084980.1 Solyc10g084990.1 Solyc10g085000.1 Solyc10g085010.1 Solyc10g085030.1 Solyc10g085040.1 Solyc10g085050.1 Solyc10g085060.1 Solyc10g085070.1 Solyc10g085080.1 Solyc10g085090.1 Solyc10g085100.1 Solyc10g085110.1 Solyc10g085120.1 Solyc10g085130.1 Solyc10g085140.1 Solyc10g085150.1 Solyc10g085160.1 Solyc10g085170.1 Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum (~3 My ago) - block_11 TreeBeST008589.M.a.b.b.b TreeBeST003740.B.b.a EPlGT00140000004828.l.a TreeBeST000707.B TreeBeST000707.C.a TreeBeST002155.A.a.a.a.b TreeBeST001100.B.a TreeBeST002123.B.b.a TreeBeST002217.A.c TreeBeST008794.J.b.b TreeBeST008860.B.a.a.a.b TreeBeST000243.C.a.b TreeBeST000409.B TreeBeST000107.S.a TreeBeST000639.F.b.a TreeBeST006605.b TreeBeST001776.A.b.b.a Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch10 PGSC0003DMG400044086 (PGSC0003DMG400044086) PGSC0003DMG400039407 (PGSC0003DMG400039407) PGSC0003DMG400019184 (PGSC0003DMG400019184) PGSC0003DMG400036930 (PGSC0003DMG400036930) PGSC0003DMG400037656 (PGSC0003DMG400037656) PGSC0003DMG400019127 (PGSC0003DMG400019127) PGSC0003DMG400019128 (PGSC0003DMG400019128) PGSC0003DMG400019129 (PGSC0003DMG400019129) PGSC0003DMG400019185 (PGSC0003DMG400019185) PGSC0003DMG400019186 (PGSC0003DMG400019186) PGSC0003DMG400019221 (PGSC0003DMG400019221) PGSC0003DMG402019187 (PGSC0003DMG402019187) PGSC0003DMG401019187 (PGSC0003DMG401019187) PGSC0003DMG400019222 (PGSC0003DMG400019222) PGSC0003DMG400019130 (PGSC0003DMG400019130) PGSC0003DMG400019132 (PGSC0003DMG400019132) PGSC0003DMG400019188 (PGSC0003DMG400019188) PGSC0003DMG400019189 (PGSC0003DMG400019189) PGSC0003DMG400019133 (PGSC0003DMG400019133) PGSC0003DMG400019134 (PGSC0003DMG400019134) PGSC0003DMG400019190 (PGSC0003DMG400019190) PGSC0003DMG400019135 (PGSC0003DMG400019135) PGSC0003DMG400019136 (PGSC0003DMG400019136) PGSC0003DMG400019137 (PGSC0003DMG400019137) PGSC0003DMG400019191 (PGSC0003DMG400019191) PGSC0003DMG400019192 (PGSC0003DMG400019192) PGSC0003DMG400019138 (PGSC0003DMG400019138) PGSC0003DMG400019139 (PGSC0003DMG400019139) PGSC0003DMG400019193 (PGSC0003DMG400019193) PGSC0003DMG400019140 (PGSC0003DMG400019140) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:10 Solyc10g086610.1 Solyc10g086620.1 Solyc10g086630.1 Solyc10g086640.1 Solyc10g086650.1 Solyc10g086660.1 Solyc10g086670.1 Solyc10g086680.1 Solyc10g086690.1 Solyc10g086700.1 Solyc10g086710.1 Solyc10g086720.1 Solyc10g086730.1 Solyc10g086740.1 Solyc10g086750.1 Solyc10g086770.1 Solyc10g086780.1 Click to hide this line (rosids) rosids speciation node (click to collapse) rosids (~110 My ago) Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:8 Vv08s0007g01480 Vv08s0007g01500 Vv08s0007g01510 Vv08s0007g01520 Vv08s0007g01530 Vv08s0007g01540 Vv08s0007g01550 Vv08s0007g01560 Vv08s0007g01570 Vv08s0007g01580 Vv08s0007g01590 Vv08s0007g01600 Vv08s0007g01610 Vv08s0007g01620 Vv08s0007g01640 Vv08s0007g01650 Vv08s0007g01660 Vv08s0007g01670 Vv08s0007g01680 Vv08s0007g01690 Vv08s0007g01700 Vv08s0007g01710 Vv08s0007g01720 Vv08s0007g01730 Vv08s0007g01740 Vv08s0007g01750 Vv08s0007g01760 Vv08s0007g01780 Vv08s0007g01790 Click to hide this line (eurosids) eurosids speciation node (click to collapse) eurosids (~107 My ago) - block_14 TreeBeST004684.A TreeBeST004514.A.b TreeBeST004514.B TreeBeST004514.A.a.b TreeBeST002299.A.b TreeBeST001906.A TreeBeST000297.I TreeBeST000197.DB TreeBeST003424.B TreeBeST000542.B.a.b TreeBeST000309.B.a TreeBeST002718.G TreeBeST002062.B.a TreeBeST001362.A.a.a TreeBeST004672.B TreeBeST001100.A.a.b.b TreeBeST000525.F TreeBeST008794.E.b.a.a.a.b.a.b TreeBeST001538.A TreeBeST003064.b TreeBeST000525.E.d TreeBeST002123.A TreeBeST000442.A.e.b.b.b.a.b TreeBeST000843.D EPlGT00140000010525 TreeBeST002205.C TreeBeST008689.P TreeBeST000171.Q.b.b.a Click to show this node (fabids) fabids speciation node (click to collapse) Click to show this node (Populus trichocarpa) Populus trichocarpa duplication node (click to collapse) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:1 POPTR_0001s25260 PTRMTP4.1 (POPTR_0001s25270) POPTRDRAFT_549119 (POPTR_0001s25280) POPTRDRAFT_172499 (POPTR_0001s25290) POPTR_0001s25300 POPTR_0001s25310 POPTR_0001s25320 POPTR_0001s25330 POPTRDRAFT_172496 (POPTR_0001s25350) POPTRDRAFT_829617 (POPTR_0001s25360) POPTR_0001s25370 POPTRDRAFT_641125 (POPTR_0001s25380) POPTRDRAFT_1067995 (POPTR_0001s25390) POPTRDRAFT_706064 (POPTR_0001s25400) POPTR_0001s25420 POPTRDRAFT_752084 (POPTR_0001s25430) POPTRDRAFT_815319 (POPTR_0001s25440) POPTRDRAFT_549107 (POPTR_0001s25450) POPTRDRAFT_641114 (POPTR_0001s25460) POPTR_0001s25470 POPTRDRAFT_829612 (POPTR_0001s25480) POPTRDRAFT_706048 (POPTR_0001s25490) POPTRDRAFT_815314 (POPTR_0001s25500) POPTR_0001s25510 POPTRDRAFT_172430 (POPTR_0001s25520) POPTRDRAFT_1067959 (POPTR_0001s25530) POPTR_0001s25540 POPTRDRAFT_797648 (POPTR_0001s25550) POPTRDRAFT_752071 (POPTR_0001s25560) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:9 POPTR_0009s04350 POPTRDRAFT_558005 (POPTR_0009s04360) POPTRDRAFT_821522 (POPTR_0009s04370) POPTRDRAFT_558003 (POPTR_0009s04380) POPTRDRAFT_768139 (POPTR_0009s04390) POPTRDRAFT_876072 (POPTR_0009s04400) POPTRDRAFT_723183 (POPTR_0009s04410) POPTRDRAFT_557998 (POPTR_0009s04430) POPTRDRAFT_768134 (POPTR_0009s04440) POPTRDRAFT_557996 (POPTR_0009s04450) POPTR_0009s04460 POPTR_0009s04470 POPTR_0009s04480 POPTRDRAFT_650201 (POPTR_0009s04490) POPTR_0009s04510 POPTR_0009s04520 POPTRDRAFT_650195 (POPTR_0009s04530) POPTR_0009s04540 POPTRDRAFT_833252 (POPTR_0009s04550) POPTRDRAFT_723146 (POPTR_0009s04560) POPTRDRAFT_650190 (POPTR_0009s04570) POPTRDRAFT_821509 (POPTR_0009s04580) POPTR_0009s04590 POPTRDRAFT_557976 (POPTR_0009s04600) POPTRDRAFT_557974 (POPTR_0009s04610) POPTRDRAFT_557973 (POPTR_0009s04620) POPTRDRAFT_1088232 (POPTR_0009s04630) POPTRDRAFT_833248 (POPTR_0009s04640) POPTRDRAFT_821505 (POPTR_0009s04650) Click to hide this line (Anc arath cacao) Anc arath cacao speciation node (click to collapse) Anc arath cacao (~90 My ago) - block_17 TreeBeST000442.A.e.b.b.b.a.b TreeBeST003760 TreeBeST001707.C TreeBeST002891.B TreeBeST002756.B TreeBeST008598.G.b TreeBeST008794.E.b.a.a.a.b.a.b TreeBeST002123.A TreeBeST000525.E.d TreeBeST003064.b TreeBeST001538.A TreeBeST000525.F TreeBeST001100.A.a.b.b TreeBeST004672.B TreeBeST001362.A.a.a TreeBeST002062.B.a TreeBeST002718.G TreeBeST000309.B.a TreeBeST000542.B.a.b TreeBeST003424.B TreeBeST000197.DB TreeBeST000297.I TreeBeST001756.D TreeBeST006181.A.b.a TreeBeST000207.F TreeBeST001855.A TreeBeST005420 TreeBeST008609.D.a.a.a TreeBeST008802.C.a Click to hide this line (Theobroma cacao) Theobroma cacao terminal node Theobroma cacao - Chr:Tc09 Tc09_g030460 Tc09_g030470 Tc09_g030480 Tc09_g030490 Tc09_g030500 Tc09_g030510 Tc09_g030520 Tc09_g030530 Tc09_g030531 Tc09_g030540 Tc09_g030550 Tc09_g030560 Tc09_g030570 Tc09_g030580 Tc09_g030590 Tc09_g030610 Tc09_g030620 Tc09_g030630 Tc09_g030640 Tc09_g030650 Tc09_g030670 Tc09_g030680 Tc09_g030690 Tc09_g030700 Tc09_g030710 Tc09_g030720 Tc09_g030730 Tc09_g030740 Tc09_g030750 Click to show this node (Brassicales) Brassicales speciation node (click to collapse) Click to show this node (Brassicaceae) Brassicaceae duplication node (click to collapse) Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae (~16 My ago) Click to show this node (Camelineae) Camelineae speciation node (click to collapse) Click to show this node (Capsella rubella) Capsella rubella duplication node (click to collapse) Click to hide this line (Capsella rubella) Capsella rubella terminal node Capsella rubella - scaffold_5 Carubv10017284m.g Carubv10019422m.g Carubv10018342m.g Carubv10018552m.g Carubv10017240m.g Carubv10017253m.g Carubv10016683m.g Carubv10018984m.g Carubv10018636m.g Carubv10016927m.g Carubv10016805m.g Carubv10017516m.g Carubv10017997m.g Carubv10018532m.g Carubv10017876m.g Carubv10018666m.g Carubv10018034m.g Carubv10019245m.g Carubv10016601m.g Carubv10017047m.g Carubv10018442m.g Carubv10018684m.g Carubv10019475m.g Carubv10019408m.g Carubv10016993m.g Carubv10018902m.g Carubv10016864m.g Carubv10016871m.g Carubv10019506m.g Click to hide this line (Capsella rubella) Capsella rubella terminal node Capsella rubella - scaffold_5 Carubv10017240m.g Carubv10017253m.g Carubv10016683m.g Carubv10018984m.g Carubv10018636m.g Carubv10016927m.g Carubv10016805m.g Carubv10017516m.g Carubv10017997m.g Carubv10018532m.g Carubv10017876m.g Carubv10018666m.g Carubv10018034m.g Carubv10019245m.g Carubv10016601m.g Carubv10017047m.g Carubv10018442m.g Carubv10018684m.g Carubv10019475m.g Carubv10019408m.g Carubv10016993m.g Carubv10018902m.g Carubv10016864m.g Carubv10016871m.g Carubv10019506m.g Carubv10016857m.g Carubv10016697m.g Carubv10019272m.g Carubv10016965m.g Click to show this node (Brassiceae) Brassiceae speciation node (click to collapse) Click to show this node (Eutremeae) Eutremeae speciation node (click to collapse) Click to hide this line (Thellungiella parvula) Thellungiella parvula terminal node Thellungiella parvula - Chr:ch2-4 Tp2g25720 Tp2g25730 Tp2g25740 Tp2g25750 Tp2g25760 Tp2g25770 Tp2g25780 Tp2g25790 Tp2g25800 Tp2g25810 Tp2g25820 Tp2g25830 Tp2g25840 Tp2g25860 Tp2g25880 Tp2g25890 Tp2g25900 Tp2g25910 Tp2g25920 Tp2g25930 Tp2g25940 Tp2g25950 Tp2g25960 Tp2g25970 Tp2g25980 Tp2g25990 Tp2g26000 Tp2g26010 Tp2g26020 Click to show this node (Brassicaceae) Brassicaceae duplication node (click to collapse) Click to show this node (Brassicaceae) Brassicaceae duplication node (click to collapse) Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae (~16 My ago) Click to show this node (Camelineae) Camelineae speciation node (click to collapse) Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis (~5 My ago) - block_7 TreeBeST000948.B.b.f TreeBeST005054.A.b.a TreeBeST008651.Q.a TreeBeST005762.A TreeBeST008962.B.b.b TreeBeST000211.C TreeBeST005187.b TreeBeST001067.B.a.a TreeBeST002006.J.b TreeBeST009526.W.b TreeBeST000356.E.b.a.d.a TreeBeST001655.A.b.b.a.f TreeBeST000054.A.a.b.b.b.b.b.b.a TreeBeST008634.E.b TreeBeST004087.d.a TreeBeST000345.F TreeBeST000790.G.g TreeBeST009130 TreeBeST006036 TreeBeST001216.A.b TreeBeST003592.B TreeBeST000045.A.g.b.a.a.a.b.b TreeBeST002786.A TreeBeST001045.B.b.d.a TreeBeST007905.A TreeBeST004121.f TreeBeST005744 TreeBeST009562.A.a.i Click to hide this line (Arabidopsis lyrata subsp lyrata) Arabidopsis lyrata subsp lyrata terminal node Arabidopsis lyrata subsp lyrata - Chr:8 358463 (fgenesh1_pg.C_scaffold_8002250) 951043 (scaffold_802930.1) 358465 (fgenesh1_pg.C_scaffold_8002252) 358466 (fgenesh1_pg.C_scaffold_8002253) 951046 (scaffold_802933.1) 918030 (Al_scaffold_0008_2781) 918031 (Al_scaffold_0008_2782) 951049 (scaffold_802936.1) 358470 (fgenesh1_pg.C_scaffold_8002257) 496445 (fgenesh2_kg.8__2261__AT5G62630.1) 496447 (fgenesh2_kg.8__2263__AT5G62640.2) 496448 (fgenesh2_kg.8__2264__AT5G62650.1) 951054 (scaffold_802941.1) 496450 (fgenesh2_kg.8__2266__AT5G62680.1) 951058 (scaffold_802945.1) 496454 (fgenesh2_kg.8__2270__AT5G62720.1) 332502 (fgenesh1_pm.C_scaffold_8001845) 496456 (fgenesh2_kg.8__2272__AT5G62740.1) 496457 (fgenesh2_kg.8__2273__AT5G62750.1) 496458 (fgenesh2_kg.8__2274__AT5G62760.1) 496460 (fgenesh2_kg.8__2276__AT5G62770.1) 951066 (scaffold_802953.1) 358487 (fgenesh1_pg.C_scaffold_8002274) 496464 (fgenesh2_kg.8__2280__AT5G62810.1) 951069 (scaffold_802956.1) 951070 (scaffold_802957.1) 918053 (Al_scaffold_0008_2804) 496466 (fgenesh2_kg.8__2282__AT5G62830.1) 918055 (Al_scaffold_0008_2806) Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:5 AT5G62575 (AT5G62575) AT5G62576 (AT5G62576) AT5G62580 (AT5G62580) AT5G62600 (AT5G62600) AT5G62610 (AT5G62610) AT5G62620 (AT5G62620) AT5G62623 (AT5G62623) AT5G62627 (AT5G62627) HIPL2 (AT5G62630) ELF5 (AT5G62640) AT5G62650 (AT5G62650) AT5G62660 (AT5G62660) AT5G62680 (AT5G62680) AT5G62710 (AT5G62710) AT5G62720 (AT5G62720) AT5G62730 (AT5G62730) HIR1 (AT5G62740) AT5G62750 (AT5G62750) AT5G62760 (AT5G62760) AT5G62770 (AT5G62770) AT5G62780 (AT5G62780) PDE129 (AT5G62790) AT5G62800 (AT5G62800) ATPEX14 (AT5G62810) AT5G62820 (AT5G62820) AT5G62830 (AT5G62830) AT5G62840 (AT5G62840) AtVEX1 (AT5G62850) Click to show this node (Brassiceae) Brassiceae speciation node (click to collapse) Click to hide this line (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A06 Bra019508 (Bra019508) Bra019507 (Bra019507) Bra019506 (Bra019506) Bra019505 (Bra019505) Bra019504 (Bra019504) Bra019503 (Bra019503) Bra019502 (Bra019502) Bra019501 (Bra019501) Bra019500 (Bra019500) Bra019499 (Bra019499) Bra019498 (Bra019498) Bra019497 (Bra019497) Bra019496 (Bra019496) Bra019495 (Bra019495) Bra019494 (Bra019494) Bra019492 (Bra019492) Bra019491 (Bra019491) Bra019490 (Bra019490) Bra019489 (Bra019489) Bra019488 (Bra019488) Bra019487 (Bra019487) Bra019486 (Bra019486) Bra019485 (Bra019485) Bra019484 (Bra019484) Bra019483 (Bra019483) Bra019482 (Bra019482) Bra019481 (Bra019481) Bra019480 (Bra019480) Bra019479 (Bra019479) Bra019478 (Bra019478) Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae (~16 My ago) - block_8 TreeBeST000860.I.h TreeBeST000083.M.d.a.a TreeBeST002119.A.b.b.b.d.a TreeBeST004827.B.a.a TreeBeST009562.A.a.i TreeBeST005744 TreeBeST004121.f TreeBeST001045.B.b.d.a TreeBeST002786.A TreeBeST003592.B TreeBeST001216.A.b TreeBeST006036 TreeBeST009130 TreeBeST000790.G.g TreeBeST000345.F TreeBeST000054.A.a.b.b.b.b.b.b.a TreeBeST004935.B TreeBeST001655.A.b.b.a.f TreeBeST000356.E.b.a.d.a TreeBeST002006.F.b.a.a.b.a.b TreeBeST002006.J.b TreeBeST001067.B.a.a TreeBeST005187.b TreeBeST000211.C TreeBeST008962.B.b.b TreeBeST005762.A TreeBeST008651.Q.a TreeBeST005054.A.b.a TreeBeST000948.B.b.f Click to show this node (Camelineae) Camelineae speciation node (click to collapse) Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis (~5 My ago) - block_7 TreeBeST002007.F.a.b.b TreeBeST000948.B.b.f TreeBeST005054.A.b.a TreeBeST008651.Q.a TreeBeST005762.A TreeBeST008962.B.b.b TreeBeST000211.C TreeBeST005187.b TreeBeST001067.B.a.a TreeBeST002006.J.b TreeBeST009526.W.b TreeBeST000356.E.b.a.d.a TreeBeST001655.A.b.b.a.f TreeBeST000054.A.a.b.b.b.b.b.b.a TreeBeST008634.E.b TreeBeST004087.d.a TreeBeST000345.F TreeBeST000790.G.g TreeBeST009130 TreeBeST006036 TreeBeST001216.A.b TreeBeST003592.B TreeBeST000045.A.g.b.a.a.a.b.b TreeBeST002786.A TreeBeST001045.B.b.d.a TreeBeST007905.A TreeBeST004121.f TreeBeST005744 Click to hide this line (Arabidopsis lyrata subsp lyrata) Arabidopsis lyrata subsp lyrata terminal node Arabidopsis lyrata subsp lyrata - Chr:5 937399 (scaffold_501590.1) 897507 (Al_scaffold_0005_1473) 897508 (Al_scaffold_0005_1474) 937402 (scaffold_501593.1) 485055 (fgenesh2_kg.5__1047__AT3G46830.1) 485057 (fgenesh2_kg.5__1049__AT3G46850.1) 897511 (Al_scaffold_0005_1477) 937406 (scaffold_501597.1) 937407 (scaffold_501598.1) 485058 (fgenesh2_kg.5__1050__AT3G46870.1) 485059 (fgenesh2_kg.5__1051__AT3G46880.1) 485060 (fgenesh2_kg.5__1052__AT3G46890.1) 485061 (fgenesh2_kg.5__1053__AT3G46900.1) 937412 (scaffold_501603.1) 937413 (scaffold_501604.1) 937416 (scaffold_501607.1) 937417 (scaffold_501608.1) 937418 (scaffold_501609.1) 897522 (Al_scaffold_0005_1488) 897523 (Al_scaffold_0005_1489) 897524 (Al_scaffold_0005_1490) 485066 (fgenesh2_kg.5__1058__AT2G39290.1) 485067 (fgenesh2_kg.5__1059__AT2G39320.1) 485068 (fgenesh2_kg.5__1060__AT2G39310.1) 937424 (scaffold_501615.1) 937425 (scaffold_501616.1) 937426 (scaffold_501617.1) 897532 (Al_scaffold_0005_1498) 937428 (scaffold_501619.1) 897534 (Al_scaffold_0005_1500) Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:5 AT5G62570 (AT5G62570) AT5G62575 (AT5G62575) AT5G62576 (AT5G62576) AT5G62580 (AT5G62580) AT5G62600 (AT5G62600) AT5G62610 (AT5G62610) AT5G62620 (AT5G62620) AT5G62623 (AT5G62623) AT5G62627 (AT5G62627) HIPL2 (AT5G62630) ELF5 (AT5G62640) AT5G62650 (AT5G62650) AT5G62660 (AT5G62660) AT5G62680 (AT5G62680) AT5G62710 (AT5G62710) AT5G62720 (AT5G62720) AT5G62730 (AT5G62730) HIR1 (AT5G62740) AT5G62750 (AT5G62750) AT5G62760 (AT5G62760) AT5G62770 (AT5G62770) AT5G62780 (AT5G62780) PDE129 (AT5G62790) AT5G62800 (AT5G62800) ATPEX14 (AT5G62810) AT5G62820 (AT5G62820) AT5G62830 (AT5G62830) AT5G62840 (AT5G62840) Click to show this node (Brassiceae) Brassiceae speciation node (click to collapse) Click to show this node (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis duplication node (click to collapse) Click to hide this line (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A06 Bra010099 (Bra010099) Bra010100 (Bra010100) Bra010101 (Bra010101) Bra010102 (Bra010102) Bra010103 (Bra010103) Bra010104 (Bra010104) Bra010105 (Bra010105) Bra010106 (Bra010106) Bra010107 (Bra010107) Bra010108 (Bra010108) Bra010109 (Bra010109) Bra010110 (Bra010110) Bra010111 (Bra010111) Bra010112 (Bra010112) Bra010113 (Bra010113) Bra010115 (Bra010115) Bra010116 (Bra010116) Bra010117 (Bra010117) Bra010118 (Bra010118) Bra010119 (Bra010119) Bra010120 (Bra010120) Bra010121 (Bra010121) Bra010122 (Bra010122) Bra010123 (Bra010123) Bra010124 (Bra010124) Bra010125 (Bra010125) Bra010126 (Bra010126) Bra010127 (Bra010127) Bra010128 (Bra010128) Bra010129 (Bra010129) Click to show this node (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis duplication node (click to collapse) Click to hide this line (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A06 Bra018169 (Bra018169) Bra018170 (Bra018170) Bra018171 (Bra018171) Bra018172 (Bra018172) Bra018173 (Bra018173) Bra018174 (Bra018174) Bra018175 (Bra018175) Bra018176 (Bra018176) Bra018177 (Bra018177) Bra018178 (Bra018178) Bra018179 (Bra018179) Bra018180 (Bra018180) Bra018181 (Bra018181) Bra018182 (Bra018182) Bra018183 (Bra018183) Bra018185 (Bra018185) Bra018186 (Bra018186) Bra018187 (Bra018187) Bra018188 (Bra018188) Bra018189 (Bra018189) Bra018190 (Bra018190) Bra018191 (Bra018191) Bra018192 (Bra018192) Bra018193 (Bra018193) Bra018194 (Bra018194) Bra018195 (Bra018195) Bra018196 (Bra018196) Bra018197 (Bra018197) Bra018198 (Bra018198) Bra018199 (Bra018199) Click to hide this line (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A01 Bra033811 (Bra033811) Bra033810 (Bra033810) Bra033809 (Bra033809) Bra033808 (Bra033808) Bra033807 (Bra033807) Bra033806 (Bra033806) Bra033805 (Bra033805) Bra033804 (Bra033804) Bra033803 (Bra033803) Bra033802 (Bra033802) Bra033801 (Bra033801) Bra033800 (Bra033800) Bra033799 (Bra033799) Bra033797 (Bra033797) Bra033798 (Bra033798) Bra033795 (Bra033795) Bra033794 (Bra033794) Bra033793 (Bra033793) Bra033792 (Bra033792) Bra033791 (Bra033791) Bra033790 (Bra033790) Bra033789 (Bra033789) Bra033788 (Bra033788) Bra033787 (Bra033787) Bra033786 (Bra033786) Bra033785 (Bra033785) Bra033784 (Bra033784) Bra033783 (Bra033783) Bra033782 (Bra033782) Bra033781 (Bra033781) Click to show this node (Brassicaceae) Brassicaceae speciation node (click to collapse) Click to show this node (Brassiceae) Brassiceae speciation node (click to collapse) Click to hide this line (Eutremeae) Eutremeae speciation node (click to collapse) Eutremeae - block_12 TreeBeST008583.A.a.a.b.b.b.b.b.b.b.b.b TreeBeST008647.K.a.b.a.b TreeBeST001108.E.f TreeBeST006660 TreeBeST008586.L.b.b.a TreeBeST004123.C TreeBeST005718.B TreeBeST008953.H TreeBeST008575.J.e.b TreeBeST000442.A.e.b.b.b.a.b.b.a TreeBeST000591.P.a.b.b.b TreeBeST001707.C TreeBeST002891.E.a.b TreeBeST002756.A.a.a TreeBeST001036.A.b.b.b.c.a.a.a TreeBeST008762.Q.j TreeBeST004093.A.b.d TreeBeST000032.B.b.a.b.a.b TreeBeST000197.DB TreeBeST001756.D TreeBeST000207.F TreeBeST001855.A.a TreeBeST000022.DB.m.a TreeBeST000022.DB.m.b.b.b TreeBeST000022.DB.m.b.a TreeBeST000022.DB.m.b.b.a TreeBeST008814.A.a.b.b TreeBeST002503.B.e TreeBeST006992.b.b TreeBeST000808.A.b.b.c Click to hide this line (Thellungiella parvula) Thellungiella parvula terminal node Thellungiella parvula - Chr:ch5-1 Tp5g14680 Tp5g14690 Tp5g14700 Tp5g14710 Tp5g14720 Tp5g14730 Tp5g14740 Tp5g14750 Tp5g14760 Tp5g14770 Tp5g14780 Tp5g14790 Tp5g14800 Tp5g14810 Tp5g14820 Tp5g14840 Tp5g14850 Tp5g14860 Tp5g14870 Tp5g14880 Tp5g14890 Tp5g14900 Tp5g14910 Tp5g14920 Tp5g14930 Tp5g14940 Tp5g14950 Tp5g14960 Tp5g14970 Tp5g14980 Click to show this node (Thellungiella halophila) Thellungiella halophila duplication node (click to collapse) Click to hide this line (Thellungiella halophila) Thellungiella halophila terminal node Thellungiella halophila - scaffold_6 Thhalv10004903m.g Thhalv10005490m.g Thhalv10005626m.g Thhalv10004842m.g Thhalv10004703m.g Thhalv10005562m.g Thhalv10004696m.g Thhalv10004017m.g Thhalv10004122m.g Thhalv10005715m.g Thhalv10003777m.g Thhalv10004721m.g Thhalv10003918m.g Thhalv10004798m.g Thhalv10003855m.g Thhalv10003849m.g Thhalv10004411m.g Thhalv10003967m.g Thhalv10003972m.g Thhalv10003739m.g Thhalv10005576m.g Thhalv10005663m.g Thhalv10003755m.g Thhalv10005666m.g Thhalv10005275m.g Thhalv10004734m.g Thhalv10003602m.g Thhalv10003887m.g Thhalv10005150m.g Click to show this node (Thellungiella halophila) Thellungiella halophila duplication node (click to collapse) Click to hide this line (Thellungiella halophila) Thellungiella halophila terminal node Thellungiella halophila - scaffold_16 Thhalv10010262m.g Thhalv10010831m.g Thhalv10010128m.g Thhalv10010219m.g Thhalv10010213m.g Thhalv10010536m.g Thhalv10010212m.g Thhalv10010268m.g Thhalv10010272m.g Thhalv10010122m.g Thhalv10010963m.g Thhalv10010968m.g Thhalv10010069m.g Thhalv10011147m.g Thhalv10010300m.g Thhalv10010964m.g Thhalv10010946m.g Thhalv10010932m.g Thhalv10011084m.g Thhalv10011008m.g Thhalv10010959m.g Thhalv10011099m.g Thhalv10011107m.g Thhalv10010785m.g Thhalv10010731m.g Thhalv10010907m.g Thhalv10010650m.g Thhalv10011144m.g Thhalv10011127m.g Click to hide this line (Thellungiella halophila) Thellungiella halophila terminal node Thellungiella halophila - scaffold_16 Thhalv10010831m.g Thhalv10010128m.g Thhalv10010219m.g Thhalv10010213m.g Thhalv10010536m.g Thhalv10010212m.g Thhalv10010268m.g Thhalv10010272m.g Thhalv10010122m.g Thhalv10010963m.g Thhalv10010968m.g Thhalv10010069m.g Thhalv10011147m.g Thhalv10010300m.g Thhalv10010964m.g Thhalv10010946m.g Thhalv10010932m.g Thhalv10011084m.g Thhalv10011008m.g Thhalv10010959m.g Thhalv10011099m.g Thhalv10011107m.g Thhalv10010785m.g Thhalv10010731m.g Thhalv10010907m.g Thhalv10010650m.g Thhalv10011144m.g Thhalv10011127m.g Thhalv10011055m.g Click to show this node (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Click to show this node (Dicotyledones) Dicotyledones speciation node (click to collapse) Click to show this node (rosids) rosids speciation node (click to collapse) Click to show this node (eurosids) eurosids speciation node (click to collapse) Click to hide this line (Anc arath cacao) Anc arath cacao speciation node (click to collapse) Anc arath cacao (~90 My ago) Click to show this node (Brassicales) Brassicales speciation node (click to collapse) Click to hide this line (Carica papaya) Carica papaya terminal node Carica papaya - Chr:supercontig_56 evm.TU.supercontig_56.76 evm.TU.supercontig_56.77 evm.TU.supercontig_56.78 evm.TU.supercontig_56.79 evm.TU.supercontig_56.80 evm.TU.supercontig_56.81 evm.TU.supercontig_56.82 evm.TU.supercontig_56.83 evm.TU.supercontig_56.84 evm.TU.supercontig_56.85 evm.TU.supercontig_56.86 evm.TU.supercontig_56.87 evm.TU.supercontig_56.88 evm.TU.supercontig_56.89 evm.TU.supercontig_56.90 evm.TU.supercontig_56.92 evm.TU.supercontig_56.93 evm.TU.supercontig_56.94 evm.TU.supercontig_56.95 evm.TU.supercontig_56.96 evm.TU.supercontig_56.97 evm.TU.supercontig_56.98 evm.TU.supercontig_56.99 evm.TU.supercontig_56.100 evm.TU.supercontig_56.101 evm.TU.supercontig_56.102 evm.TU.supercontig_56.103 evm.TU.supercontig_56.104 evm.TU.supercontig_56.106 evm.TU.supercontig_56.107 Click to hide this line (Theobroma cacao) Theobroma cacao terminal node Theobroma cacao - Chr:Tc05 Tc05_g003060 Tc05_g003070 Tc05_g003080 Tc05_g003090 Tc05_g003100 Tc05_g003110 Tc05_g003120 Tc05_g003130 Tc05_g003140 Tc05_g003150 Tc05_g003160 Tc05_g003170 Tc05_g003180 Tc05_g003190 Tc05_g003200 Tc05_g003220 Tc05_g003230 Tc05_g003240 Tc05_g003250 Tc05_g003260 Tc05_g003270 Tc05_g003280 Tc05_g003290 Tc05_g003300 Tc05_g003310 Tc05_g003320 Tc05_g003330 Tc05_g003340 Tc05_g003350 Click to show this node (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Click to hide this line (Dicotyledones) Dicotyledones speciation node (click to collapse) Dicotyledones (~110 My ago) Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum (~3 My ago) - block_33 TreeBeST008792.H.a TreeBeST008630.A.b TreeBeST000619.B.a.a.b.a TreeBeST000244.P TreeBeST000062.C TreeBeST001925.A.a.b TreeBeST008642.B TreeBeST008781.G.b TreeBeST000581.C.b.b.a.b TreeBeST008818.M.a.b.a.b.b.b.b TreeBeST008818.M.a.b.a.b.b.b.a TreeBeST008607.K.a.a.a.b.b TreeBeST000795.C.a.b.b TreeBeST000064.S.b TreeBeST008747.T.a.b TreeBeST000347.H.c.a EPlGT00160000044010 TreeBeST002333.A.a.b TreeBeST001982.a.b TreeBeST004482.A.b TreeBeST002299.B.b TreeBeST008771.G.a.b.b.b TreeBeST009511.F.b TreeBeST007083.a TreeBeST000040.N.a TreeBeST001520.A.a.a.b TreeBeST003355.a.b TreeBeST002012.A Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch06 PGSC0003DMG400025284 (PGSC0003DMG400025284) PGSC0003DMG400025276 (PGSC0003DMG400025276) PGSC0003DMG400039424 (PGSC0003DMG400039424) PGSC0003DMG400044018 (PGSC0003DMG400044018) PGSC0003DMG400004520 (PGSC0003DMG400004520) PGSC0003DMG400046820 (PGSC0003DMG400046820) PGSC0003DMG400004517 (PGSC0003DMG400004517) PGSC0003DMG400004518 (PGSC0003DMG400004518) PGSC0003DMG400004519 (PGSC0003DMG400004519) PGSC0003DMG400029912 (PGSC0003DMG400029912) PGSC0003DMG400029924 (PGSC0003DMG400029924) PGSC0003DMG400029913 (PGSC0003DMG400029913) PGSC0003DMG400029914 (PGSC0003DMG400029914) PGSC0003DMG400034479 (PGSC0003DMG400034479) PGSC0003DMG400029915 (PGSC0003DMG400029915) PGSC0003DMG400029916 (PGSC0003DMG400029916) PGSC0003DMG401029918 (PGSC0003DMG401029918) PGSC0003DMG402029918 (PGSC0003DMG402029918) PGSC0003DMG402029927 (PGSC0003DMG402029927) PGSC0003DMG401029927 (PGSC0003DMG401029927) PGSC0003DMG400029919 (PGSC0003DMG400029919) PGSC0003DMG400029929 (PGSC0003DMG400029929) PGSC0003DMG400036322 (PGSC0003DMG400036322) PGSC0003DMG400029920 (PGSC0003DMG400029920) PGSC0003DMG400029931 (PGSC0003DMG400029931) PGSC0003DMG400029921 (PGSC0003DMG400029921) PGSC0003DMG400029922 (PGSC0003DMG400029922) PGSC0003DMG400029932 (PGSC0003DMG400029932) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:6 Solyc06g035810.1 Solyc06g035820.1 Solyc06g035830.1 Solyc06g035840.1 Solyc06g035850.1 Solyc06g035860.1 Solyc06g035870.2 Solyc06g035880.1 Solyc06g035890.1 Solyc06g035900.1 Solyc06g035910.1 Solyc06g035920.2 Solyc06g035930.1 Solyc06g035940.2 Solyc06g035960.2 Solyc06g035980.2 Solyc06g035990.2 Solyc06g036000.2 Solyc06g036010.1 Solyc06g036020.1 Solyc06g036030.1 Solyc06g036040.1 Solyc06g036050.2 Solyc06g036060.2 Solyc06g036080.2 Solyc06g036090.1 Solyc06g036110.1 Solyc06g036120.2 Click to show this node (rosids) rosids speciation node (click to collapse) Click to show this node (eurosids) eurosids speciation node (click to collapse) Click to show this node (Anc arath cacao) Anc arath cacao speciation node (click to collapse) Click to show this node (Brassicales) Brassicales speciation node (click to collapse) Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae (~16 My ago) - block_6 TreeBeST001930.A TreeBeST008752.D.a.a.b.c.a TreeBeST000549.I.a.b.e TreeBeST002901.A.b.e TreeBeST002264.A.a.b.a TreeBeST001572.B.b.b.a.a TreeBeST003110.A.g.b TreeBeST000441.O TreeBeST002618.A.b.b.d TreeBeST000703.B.a TreeBeST001593.b.b.c.a TreeBeST000223.I.b.b.d.a TreeBeST000361.L.b.a TreeBeST000058.B.b TreeBeST000475.B.a.a.a.b.a.b.a TreeBeST003756.A.b.b.a.b.a TreeBeST001250.B TreeBeST002333.A.c TreeBeST001777.F TreeBeST008861.O.a TreeBeST002156.A.b.a TreeBeST000032.B.b.b.a.a.b.a.b.a TreeBeST000182.B TreeBeST000182.A TreeBeST002299.B TreeBeST000655.D.b.a.b.b.a.a TreeBeST000040.M.e.a TreeBeST003361.A.b TreeBeST009549.J TreeBeST005258 Click to hide this line (Camelineae) Camelineae speciation node (click to collapse) Camelineae - block_3 TreeBeST005258 TreeBeST009549.J TreeBeST003361.A.b TreeBeST000040.M.e.a TreeBeST000655.D.b.a.b.b.a.a TreeBeST008687.B.d.b.a.a TreeBeST000182.A TreeBeST000182.B TreeBeST000032.B.b.b.a.a.b.a.b.a TreeBeST002156.A.b.a TreeBeST008861.O.a TreeBeST001777.F TreeBeST002333.A.c TreeBeST001250.B TreeBeST003756.A.b.b.a.b.a TreeBeST000475.B.a.a.a.b.a.b.a TreeBeST000058.B.b.b TreeBeST000868.F.a.a.b.a.a.a.a TreeBeST000868.F.a.a.b.a.a.a.b TreeBeST000361.L.b.a TreeBeST000223.I.b.b.d.a TreeBeST001593.b.b.c.a TreeBeST000703.B.a TreeBeST002618.A.b.b.d TreeBeST000441.O TreeBeST003110.A.g.b TreeBeST001572.B.b.b.a.a TreeBeST002264.A.a.b.a TreeBeST002901.A.b.e TreeBeST000549.I.a.b.e Click to hide this line (Capsella rubella) Capsella rubella terminal node Capsella rubella - scaffold_6 Carubv10000825m.g Carubv10003193m.g Carubv10000701m.g Carubv10000636m.g Carubv10001877m.g Carubv10000161m.g Carubv10001208m.g Carubv10002158m.g Carubv10001880m.g Carubv10000478m.g Carubv10000545m.g Carubv10002779m.g Carubv10002630m.g Carubv10003285m.g Carubv10000648m.g Carubv10001048m.g Carubv10000306m.g Carubv10003875m.g Carubv10001981m.g Carubv10000356m.g Carubv10001871m.g Carubv10000909m.g Carubv10003479m.g Carubv10000858m.g Carubv10001693m.g Carubv10000642m.g Carubv10003617m.g Carubv10003155m.g Carubv10003273m.g Carubv10002731m.g Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis (~5 My ago) - block_2 TreeBeST009549.J TreeBeST003361.A.b TreeBeST000040.M.e.a.b TreeBeST000040.M.e.a.a TreeBeST000655.D.b.a.b.b.a.a TreeBeST002299.B TreeBeST000182.B TreeBeST000032.B.b.b.a.a.b.a.b.a TreeBeST002156.A.b.a TreeBeST008861.O.a TreeBeST007729.B TreeBeST001777.F TreeBeST002333.A.c TreeBeST001250.B TreeBeST000287.R.b TreeBeST000475.B.a.a.a.b.a.b.a TreeBeST006745.A.b.b TreeBeST000058.B.b.b TreeBeST000868.F.a.a.b.a.a.a.a TreeBeST008931.A.a.k.a.c TreeBeST000868.F.a.a.b.a.a.a.b.a TreeBeST000361.L.b.a TreeBeST000223.I.b.b.d.a TreeBeST001593.b.b.c.a TreeBeST000703.B.a TreeBeST002618.A.b.b.d TreeBeST000441.O TreeBeST003110.A.g.b TreeBeST001572.B.b.b.a.a TreeBeST002264.A.a.b.a Click to hide this line (Arabidopsis lyrata subsp lyrata) Arabidopsis lyrata subsp lyrata terminal node Arabidopsis lyrata subsp lyrata - Chr:6 489231 (fgenesh2_kg.6__2365__AT5G23700.1) 941896 (scaffold_602440.1) 489232 (fgenesh2_kg.6__2366__AT5G23720.1) 326666 (fgenesh1_pm.C_scaffold_6001886) 941899 (scaffold_602443.1) 941900 (scaffold_602444.1) 489237 (fgenesh2_kg.6__2371__AT5G23750.1) 941902 (scaffold_602446.1) 894258 (Al_scaffold_0006_2254) 894259 (Al_scaffold_0006_2255) 489241 (fgenesh2_kg.6__2375__AT5G23800.1) 941906 (scaffold_602450.1) 489244 (fgenesh2_kg.6__2378__AT5G23810.1) 941908 (scaffold_602452.1) 941909 (scaffold_602453.1) 894266 (Al_scaffold_0006_2262) 941911 (scaffold_602455.1) 894268 (Al_scaffold_0006_2264) 489246 (fgenesh2_kg.6__2380__AT5G23880.1) 489250 (fgenesh2_kg.6__2384__AT5G23890.1) 489251 (fgenesh2_kg.6__2385__AT5G23900.1) 489252 (fgenesh2_kg.6__2386__AT5G23903.1) 489253 (fgenesh2_kg.6__2387__AT5G23910.1) 941921 (scaffold_602465.1) 489254 (fgenesh2_kg.6__2388__AT5G23930.1) 351411 (fgenesh1_pg.C_scaffold_6002004) 941924 (scaffold_602468.1) 941925 (scaffold_602469.1) 489255 (fgenesh2_kg.6__2389__AT5G23970.1) 894281 (Al_scaffold_0006_2277) Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:5 AT5G23710 (AT5G23710) PHS1 (AT5G23720) RUP2 (AT5G23730) RPS11-BETA (AT5G23740) AT5G23750 (AT5G23750) AT5G23760 (AT5G23760) DUF8 (AT5G23770) DUF9 (AT5G23780) AtGolS5 (AT5G23790) ATDUF10 (AT5G23800) AAP7 (AT5G23810) AT5G23820 (AT5G23820) AT5G23830 (AT5G23830) AT5G23840 (AT5G23840) AT5G23850 (AT5G23850) AT5G23870 (AT5G23870) ESP5 (AT5G23880) AT5G23890 (AT5G23890) AT5G23900 (AT5G23900) AT5G23903 (AT5G23903) AT5G23908 (AT5G23908) AT5G23910 (AT5G23910) AT5G23920 (AT5G23920) AT5G23930 (AT5G23930) EMB3009 (AT5G23940) AT5G23950 (AT5G23950) ATTPS21 (AT5G23960) AT5G23970 (AT5G23970) FRO4 (AT5G23980) AT5G23989 (AT5G23989) Click to hide this line (Brassiceae) Brassiceae speciation node (click to collapse) Brassiceae - block_15 TreeBeST009521.Q.a.b.b TreeBeST008752.D.a.a.b.c.a.b TreeBeST000549.I.a.b.e TreeBeST002901.A.b.e TreeBeST002264.A.a.b.a TreeBeST001572.B.b.b.a.a TreeBeST003110.A.g.b TreeBeST000441.O TreeBeST002618.A.b.b.d TreeBeST000703.B.a TreeBeST001593.b.b.c.a TreeBeST000223.I.b.b.d.a.b TreeBeST000361.L.b.a TreeBeST000058.B.b TreeBeST000475.B.a.a.a.b.a.b.a TreeBeST003756.A.b.b.a.b.a TreeBeST001250.B TreeBeST002333.A.c.b TreeBeST001777.F TreeBeST008861.O.a TreeBeST002156.A.b.a TreeBeST000032.B.b.b.a.a.b.a.b.a TreeBeST000182.B TreeBeST000182.A TreeBeST002299.B TreeBeST000655.D.b.a.b.b.a.a TreeBeST003361.A.b TreeBeST009549.J TreeBeST005258 TreeBeST000626.E.b.a.b Click to hide this line (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A06 Bra009695 (Bra009695) Bra009696 (Bra009696) Bra009697 (Bra009697) Bra009698 (Bra009698) Bra009699 (Bra009699) Bra009700 (Bra009700) Bra009701 (Bra009701) Bra009702 (Bra009702) Bra009703 (Bra009703) Bra009704 (Bra009704) Bra009705 (Bra009705) Bra009706 (Bra009706) Bra009707 (Bra009707) Bra009708 (Bra009708) Bra009709 (Bra009709) Bra009711 (Bra009711) Bra009712 (Bra009712) Bra009713 (Bra009713) Bra009714 (Bra009714) Bra009715 (Bra009715) Bra009716 (Bra009716) Bra009717 (Bra009717) Bra009718 (Bra009718) Bra009719 (Bra009719) Bra009720 (Bra009720) Bra009721 (Bra009721) Bra009722 (Bra009722) Bra009723 (Bra009723) Bra009724 (Bra009724) Bra009725 (Bra009725) Click to hide this line (Eutremeae) Eutremeae speciation node (click to collapse) Eutremeae - block_4 TreeBeST002625.A TreeBeST000626.E.b.a.b TreeBeST005258 TreeBeST009549.J TreeBeST003361.A.b TreeBeST000655.D.b.a.b.b.a.a TreeBeST000182.A TreeBeST000182.B TreeBeST000032.B.b.b.a.a.b.a.b.a TreeBeST002156.A.b.a TreeBeST008861.O.a TreeBeST001777.F TreeBeST002333.A.c.b TreeBeST001250.B TreeBeST003756.A.b.b.a.b.a TreeBeST000475.B.a.a.a.b.a.b.a TreeBeST000058.B.b TreeBeST000361.L.b.a TreeBeST000223.I.b.b.d.a.b TreeBeST001593.b.b.c.a TreeBeST000703.B.a TreeBeST002618.A.b.b.d TreeBeST000441.O TreeBeST003110.A.g.b TreeBeST001572.B.b.b.a.a TreeBeST001930.B.b.a.b TreeBeST001930.A TreeBeST008817.A.a.a.b.b TreeBeST008817.C.b.e TreeBeST002736.A.f.b.b Click to hide this line (Thellungiella halophila) Thellungiella halophila terminal node Thellungiella halophila - scaffold_6 Thhalv10003540m.g Thhalv10005383m.g Thhalv10004719m.g Thhalv10004251m.g Thhalv10005476m.g Thhalv10003911m.g Thhalv10005351m.g Thhalv10003616m.g Thhalv10005421m.g Thhalv10005418m.g Thhalv10005519m.g Thhalv10005057m.g Thhalv10004940m.g Thhalv10004537m.g Thhalv10003948m.g Thhalv10004218m.g Thhalv10003707m.g Thhalv10003612m.g Thhalv10004920m.g Thhalv10005649m.g Thhalv10004859m.g Thhalv10004187m.g Thhalv10004127m.g Thhalv10004867m.g Thhalv10004258m.g Thhalv10003544m.g Thhalv10003655m.g Thhalv10005713m.g Thhalv10003801m.g Thhalv10005528m.g Click to hide this line (Thellungiella parvula) Thellungiella parvula terminal node Thellungiella parvula - Chr:ch2-4 Tp2g23280 Tp2g23290 Tp2g23300 Tp2g23310 Tp2g23320 Tp2g23330 Tp2g23340 Tp2g23350 Tp2g23360 Tp2g23370 Tp2g23380 Tp2g23390 Tp2g23400 Tp2g23410 Tp2g23440 Tp2g23450 Tp2g23460 Tp2g23470 Tp2g23480 Tp2g23490 Tp2g23500 Tp2g23510 Tp2g23530 Tp2g23520 Tp2g23540 Tp2g23550 Tp2g23560 Tp2g23570 Tp2g23580 Click to show this node (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Click to show this node (Dicotyledones) Dicotyledones speciation node (click to collapse) Click to show this node (rosids) rosids speciation node (click to collapse) Click to hide this line (eurosids) eurosids speciation node (click to collapse) eurosids (~107 My ago) Click to show this node (fabids) fabids speciation node (click to collapse) Click to show this node (Leguminosae) Leguminosae speciation node (click to collapse) Click to show this node (Papilionoideae) Papilionoideae speciation node (click to collapse) Click to hide this line (Lotus japonicus) Lotus japonicus terminal node Lotus japonicus - Chr:chr5.CM0148 chr5.CM0148.220.r2.a chr5.CM0148.240.r2.d chr5.CM0148.260.r2.d chr5.CM0148.270.r2.d chr5.CM0148.280.r2.d chr5.CM0148.300.r2.d chr5.CM0148.310.r2.d chr5.CM0148.320.r2.d chr5.CM0148.350.r2.d chr5.CM0148.360.r2.d chr5.CM0148.370.r2.d chr5.CM0148.380.r2.d chr5.CM0148.390.r2.d chr5.CM0148.400.r2.m chr5.CM0148.410.r2.m chr5.CM0148.430.r2.m chr5.CM0148.440.r2.m chr5.CM0148.450.r2.m chr5.CM0148.460.r2.m chr5.CM0148.470.r2.m chr5.CM0148.490.r2.m chr5.CM0148.500.r2.m chr5.CM0148.510.r2.m chr5.CM0148.520.r2.m chr5.CM0148.530.r2.m chr5.CM0148.540.r2.m chr5.CM0148.550.r2.m chr5.CM0148.560.r2.m chr5.CM0148.570.r2.m chr5.CM0148.580.r2.m Click to show this node (Anc arath cacao) Anc arath cacao speciation node (click to collapse) Click to show this node (Brassicales) Brassicales speciation node (click to collapse) Click to show this node (Brassicaceae) Brassicaceae speciation node (click to collapse) Click to show this node (Brassiceae) Brassiceae speciation node (click to collapse) Click to show this node (Eutremeae) Eutremeae speciation node (click to collapse) Click to hide this line (Thellungiella halophila) Thellungiella halophila terminal node Thellungiella halophila - scaffold_16 Thhalv10010494m.g Thhalv10011010m.g Thhalv10010849m.g Thhalv10010396m.g Thhalv10010462m.g Thhalv10010130m.g Thhalv10010995m.g Thhalv10010336m.g Thhalv10010940m.g Thhalv10010364m.g Thhalv10011150m.g Thhalv10011042m.g Thhalv10010724m.g Thhalv10010290m.g Thhalv10010297m.g Thhalv10010269m.g Thhalv10011165m.g Thhalv10010809m.g Thhalv10011050m.g Thhalv10011156m.g Thhalv10010957m.g Thhalv10010917m.g Thhalv10010781m.g Thhalv10010657m.g Thhalv10010222m.g Thhalv10010143m.g Thhalv10010688m.g Thhalv10010519m.g Thhalv10010105m.g Thhalv10010238m.g Click to show this node (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Click to show this node (Dicotyledones) Dicotyledones speciation node (click to collapse) Click to hide this line (rosids) rosids speciation node (click to collapse) rosids (~110 My ago) - block_427 TreeBeST008747.T.b TreeBeST002155.B.b Click to show this node (eurosids) eurosids duplication node (click to collapse) Click to show this node (eurosids) eurosids speciation node (click to collapse) Click to show this node (fabids) fabids speciation node (click to collapse) Click to show this node (Leguminosae) Leguminosae speciation node (click to collapse) Click to show this node (Papilionoideae) Papilionoideae speciation node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm20 GLYMA20G29690 GMA.4672 (GLYMA20G29700) MYB94 (GLYMA20G29710) GLYMA20G29721 GLYMA20G29730 GLYMA20G29740 GLYMA20G29750 GLYMA20G29761 GLYMA20G29770 GLYMA20G29780 GLYMA20G29790 GLYMA20G29801 GLYMA20G29810 GLYMA20G29820 GLYMA20G29831 GLYMA20G29850 GLYMA20G29860 GLYMA20G29875 GLYMA20G29890 GLYMA20G29900 GLYMA20G29920 GLYMA20G29930 GLYMA20G29940 GLYMA20G29950 GLYMA20G29960 GLYMA20G29971 GLYMA20G29981 GLYMA20G29990 GLYMA20G30000 GLYMA20G30020 Click to hide this line (eurosids) eurosids speciation node (click to collapse) eurosids (~107 My ago) - block_7 TreeBeST002156.A.a TreeBeST004482.C TreeBeST008824.H.b.b TreeBeST003067.B TreeBeST008861.O TreeBeST006876.a TreeBeST004482.B TreeBeST001474.A.a.b TreeBeST001250.B TreeBeST003756.A.b.b.a.b.a TreeBeST002681.K TreeBeST008732.C TreeBeST003470.A TreeBeST002155.B.b TreeBeST008747.T.b TreeBeST001019.E TreeBeST002155.A.a.b.b.b.b.a.b TreeBeST000475.B.a.a.a.b.a.a TreeBeST000174.J TreeBeST000361.L.a TreeBeST001271.B.a TreeBeST004207 TreeBeST005613 TreeBeST009525.Y TreeBeST000801.E TreeBeST000223.D TreeBeST000223.I.b.b TreeBeST009539.G.b TreeBeST001924.B TreeBeST000113.P.a.b Click to show this node (Anc arath cacao) Anc arath cacao speciation node (click to collapse) Click to hide this line (Theobroma cacao) Theobroma cacao terminal node Theobroma cacao - Chr:Tc03 Tc03_g020360 Tc03_g020370 Tc03_g020380 Tc03_g020390 Tc03_g020400 Tc03_g020410 Tc03_g020420 Tc03_g020430 Tc03_g020440 Tc03_g020450 Tc03_g020460 Tc03_g020470 Tc03_g020480 Tc03_g020490 Tc03_g020500 Tc03_g020520 Tc03_g020530 Tc03_g020540 Tc03_g020550 Tc03_g020560 Tc03_g020570 Tc03_g020580 Tc03_g020590 Tc03_g020600 Tc03_g020610 Tc03_g020620 Tc03_g020630 Tc03_g020640 Tc03_g020650 Tc03_g020660 Click to show this node (fabids) fabids speciation node (click to collapse) Click to hide this line (Leguminosae) Leguminosae speciation node (click to collapse) Leguminosae (~97 My ago) - block_20 TreeBeST009539.G.b TreeBeST000223.I.b.b TreeBeST000223.D TreeBeST000801.E TreeBeST009525.@B TreeBeST009525.T.a.a TreeBeST005613 TreeBeST004207 TreeBeST001271.B.a TreeBeST000361.L.a TreeBeST000174.J TreeBeST000475.B.a.a.a.b.b TreeBeST008727.P.a.b.d TreeBeST002155.A.a.b.b.b.b.a.b TreeBeST001019.E TreeBeST001527.A.b.b TreeBeST008747.T.a TreeBeST002155.B.b TreeBeST003470.A TreeBeST004814.b TreeBeST008732.C TreeBeST002681.K TreeBeST003756.A.b.b.a.b.a TreeBeST001250.B TreeBeST002333.A TreeBeST001801.A.a.b.b TreeBeST001474.A.a.b TreeBeST004482.B TreeBeST006876.a TreeBeST008861.O Click to show this node (Papilionoideae) Papilionoideae speciation node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm10 GLYMA10G37795 GLYMA10G37810 GLYMA10G37820 GLYMA10G37831 GLYMA10G37840 GLYMA10G37851 GLYMA10G37860 GLYMA10G37870 GLYMA10G37890 GLYMA10G37900 GLYMA10G37910 GLYMA10G37920 GLYMA10G37931 GMA.38516 (GLYMA10G37940) GLYMA10G37950 GLYMA10G37971 GLYMA10G37980 GLYMA10G37990 GLYMA10G38000 GLYMA10G38020 GLYMA10G38031 GLYMA10G38041 GLYMA10G38050 GLYMA10G38060 GLYMA10G38070 GMA.25384 (GLYMA10G38080) GLYMA10G38090 GLYMA10G38101 GMA.19515 (GLYMA10G38110) GLYMA10G38125 Click to hide this line (Rosaceae) Rosaceae speciation node (click to collapse) Rosaceae - block_2 TreeBeST008836.K TreeBeST000113.P.a.b TreeBeST001924.B TreeBeST000223.I.b.b TreeBeST000223.D TreeBeST000801.E TreeBeST009525.@B TreeBeST005613 TreeBeST004207 TreeBeST001271.B.a TreeBeST000361.L.a TreeBeST000174.J TreeBeST000475.B.a.a.a.b.b.d TreeBeST002155.A.a.b.b.b.b.a.b TreeBeST001019.E TreeBeST002155.B.b TreeBeST003470.A TreeBeST004814.b TreeBeST008732.C TreeBeST002681.D TreeBeST003756.A.b.b.a.b.a.a TreeBeST000498.N TreeBeST003756.A.b.b.a.b.a.b TreeBeST001250.B TreeBeST002333.A TreeBeST001801.A.a.b.a TreeBeST001474.A.a.a TreeBeST001474.A.a.b TreeBeST004482.B TreeBeST006876.a Click to hide this line (Prunus persica) Prunus persica terminal node Prunus persica - scaffold_2 ppa022784m.g ppa019729m.g ppa022637m.g ppa011367m.g ppa019961m.g ppa010860m.g ppa001107m.g ppa1027186m.g ppa001989m.g ppa025794m.g ppa024290m.g ppa005169m.g ppa023179m.g ppa013189m.g ppa022999m.g ppa011685m.g ppa004195m.g ppa019211m.g ppa026875m.g ppa024029m.g ppa000308m.g ppa006446m.g ppa007380m.g ppa001928m.g ppa003980m.g ppa023035m.g ppa004199m.g ppa004356m.g ppa001129m.g ppa013641m.g Click to hide this line (Fragaria vesca) Fragaria vesca terminal node Fragaria vesca - Chr:LG7 gene13251-v1.0-hybrid gene13252-v1.0-hybrid gene13253-v1.0-hybrid gene13254-v1.0-hybrid gene13255-v1.0-hybrid gene13256-v1.0-hybrid gene13257-v1.0-hybrid gene13258-v1.0-hybrid gene13259-v1.0-hybrid gene13260-v1.0-hybrid gene13261-v1.0-hybrid gene13262-v1.0-hybrid gene13263-v1.0-hybrid gene13264-v1.0-hybrid gene13265-v1.0-hybrid gene13267-v1.0-hybrid gene13268-v1.0-hybrid gene13269-v1.0-hybrid gene13270-v1.0-hybrid gene13271-v1.0-hybrid gene13272-v1.0-hybrid gene13273-v1.0-hybrid gene13274-v1.0-hybrid gene13275-v1.0-hybrid gene13276-v1.0-hybrid gene13277-v1.0-hybrid gene13278-v1.0-hybrid gene13279-v1.0-hybrid gene13280-v1.0-hybrid gene13281-v1.0-hybrid Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:16 Vv16s0050g00230 Vv16s0050g00240 Vv16s0050g00250 Vv16s0050g00270 Vv16s0050g00290 Vv16s0050g00300 Vv16s0050g00310 Vv16s0050g00320 Vv16s0050g00330 Vv16s0050g00340 Vv16s0050g00350 Vv16s0050g00360 Vv16s0050g00370 Vv16s0050g00390 Vv16s0050g00400 Vv16s0050g00410 Vv16s0050g00430 Vv16s0050g00440 Vv16s0050g00450 Vv16s0050g00460 Vv16s0050g00470 Vv16s0050g00480 Vv16s0050g00490 Vv16s0050g00500 Vv16s0050g00510 Vv16s0050g00520 Vv16s0050g00530 Vv16s0050g00540 Click to show this node (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Click to hide this line (Dicotyledones) Dicotyledones speciation node (click to collapse) Dicotyledones (~110 My ago) Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum (~3 My ago) - block_21 TreeBeST001982.a.a TreeBeST002333.A.a.a TreeBeST001250.B TreeBeST000498.N TreeBeST000895.C.a.a.a.b TreeBeST001274.F.a.a TreeBeST002681.K TreeBeST008732.C TreeBeST000154.Q.a EPlGT00140000008788.C TreeBeST002155.B.b.b TreeBeST006091 TreeBeST008953.C TreeBeST004909.a.b TreeBeST008747.T.a.a TreeBeST001019.E TreeBeST000347.H.c.b.a TreeBeST000475.B.a.a.a.b.a.a.a TreeBeST000475.B.a.a.a.b.a.b TreeBeST000174.J TreeBeST000361.L.b TreeBeST004207 TreeBeST005613 TreeBeST009525.T.a.a TreeBeST000801.E TreeBeST000223.I.b.b.a TreeBeST001924.B TreeBeST000113.P.a.a.a TreeBeST002429.A.a.b TreeBeST000213.@B Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:ST4.02ch03 PGSC0003DMG401014290 (PGSC0003DMG401014290) PGSC0003DMG402014290 (PGSC0003DMG402014290) PGSC0003DMG400014291 (PGSC0003DMG400014291) PGSC0003DMG400014338 (PGSC0003DMG400014338) PGSC0003DMG400014367 (PGSC0003DMG400014367) PGSC0003DMG400014339 (PGSC0003DMG400014339) PGSC0003DMG400014340 (PGSC0003DMG400014340) PGSC0003DMG400014292 (PGSC0003DMG400014292) PGSC0003DMG400014341 (PGSC0003DMG400014341) PGSC0003DMG400014293 (PGSC0003DMG400014293) PGSC0003DMG400014342 (PGSC0003DMG400014342) PGSC0003DMG400014343 (PGSC0003DMG400014343) PGSC0003DMG400014295 (PGSC0003DMG400014295) PGSC0003DMG401014344 (PGSC0003DMG401014344) PGSC0003DMG402014344 (PGSC0003DMG402014344) PGSC0003DMG400014345 (PGSC0003DMG400014345) PGSC0003DMG400014297 (PGSC0003DMG400014297) PGSC0003DMG400014346 (PGSC0003DMG400014346) PGSC0003DMG400014298 (PGSC0003DMG400014298) PGSC0003DMG400014368 (PGSC0003DMG400014368) PGSC0003DMG400014347 (PGSC0003DMG400014347) PGSC0003DMG400044815 (PGSC0003DMG400044815) PGSC0003DMG400014348 (PGSC0003DMG400014348) PGSC0003DMG400014299 (PGSC0003DMG400014299) PGSC0003DMG400014300 (PGSC0003DMG400014300) PGSC0003DMG400014301 (PGSC0003DMG400014301) PGSC0003DMG402014350 (PGSC0003DMG402014350) PGSC0003DMG401014350 (PGSC0003DMG401014350) PGSC0003DMG400014351 (PGSC0003DMG400014351) PGSC0003DMG400040993 (PGSC0003DMG400040993) Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:3 Solyc03g025580.1 Solyc03g025590.2 Solyc03g025600.2 Solyc03g025610.1 Solyc03g025620.2 Solyc03g025630.2 Solyc03g025640.1 Solyc03g025650.1 Solyc03g025660.1 Solyc03g025670.2 Solyc03g025680.2 Solyc03g025690.2 Solyc03g025700.1 Solyc03g025710.2 Solyc03g025720.2 Solyc03g025740.2 Solyc03g025750.2 Solyc03g025760.2 Solyc03g025770.2 Solyc03g025780.2 Solyc03g025790.2 Solyc03g025800.2 Solyc03g025810.2 Solyc03g025820.1 Solyc03g025830.2 Solyc03g025840.2 REM-1 (Solyc03g025850.2) Solyc03g025860.2 Solyc03g025870.2 Solyc03g025880.2 Click to hide this line (rosids) rosids speciation node (click to collapse) rosids (~110 My ago) - block_8 TreeBeST000930.G TreeBeST005144.B TreeBeST008642.H TreeBeST002720.A.a TreeBeST003092.A TreeBeST001286.A.b TreeBeST002065.b.b TreeBeST000243.D TreeBeST000417.D.a.b TreeBeST008773.N TreeBeST001527.A.b.a TreeBeST000231.I TreeBeST001453.G TreeBeST000475.B.a.b TreeBeST001527.A.b.b TreeBeST008747.T.a TreeBeST000114.K.a TreeBeST000554.B TreeBeST000554.C.b TreeBeST000142.B.a TreeBeST006328 TreeBeST000292.J TreeBeST000525.G.a TreeBeST002812.A.b TreeBeST002152.B TreeBeST005768 TreeBeST000860.B.b Click to show this node (eurosids) eurosids speciation node (click to collapse) Click to show this node (fabids) fabids speciation node (click to collapse) Click to show this node (Populus trichocarpa) Populus trichocarpa duplication node (click to collapse) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:1 POPTRDRAFT_180473 (POPTR_0001s09030) POPTRDRAFT_640520 (POPTR_0001s09040) POPTRDRAFT_548494 (POPTR_0001s09050) POPTRDRAFT_709393 (POPTR_0001s09060) POPTRDRAFT_709387 (POPTR_0001s09070) XM_002298012.1 (POPTR_0001s09080) POPTRDRAFT_815097 (POPTR_0001s09090) POPTRDRAFT_843589 (POPTR_0001s09100) POPTRDRAFT_548487 (POPTR_0001s09110) POPTRDRAFT_842227 (POPTR_0001s09120) POPTRDRAFT_709382 (POPTR_0001s09130) XM_002298008.1 (POPTR_0001s09140) POPTRDRAFT_840289 (POPTR_0001s09150) POPTRDRAFT_751341 (POPTR_0001s09160) POPTRDRAFT_640513 (POPTR_0001s09170) POPTR_0001s09190 POPTRDRAFT_709378 (POPTR_0001s09200) POPTRDRAFT_751336 (POPTR_0001s09210) POPTRDRAFT_579334 (POPTR_0001s09220) POPTRDRAFT_180407 (POPTR_0001s09230) XM_002298003.1 (POPTR_0001s09240) POPTRDRAFT_180397 (POPTR_0001s09250) PTRCGPX3_1 (POPTR_0001s09270) PTRCGPX5 (POPTR_0001s09280) POPTR_0001s09290 POPTRDRAFT_846545 (POPTR_0001s09300) POPTRDRAFT_709356 (POPTR_0001s09310) POPTRDRAFT_829476 (POPTR_0001s09320) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:3 MYB131 (POPTR_0003s12390) POPTRDRAFT_554331 (POPTR_0003s12400) POPTR_0003s12410 POPTRDRAFT_852953 (POPTR_0003s12420) POPTR_0003s12430 POPTRDRAFT_852558 (POPTR_0003s12440) POPTRDRAFT_554336 (POPTR_0003s12450) XM_002304449.1 (POPTR_0003s12460) POPTRDRAFT_554337 (POPTR_0003s12470) POPTRDRAFT_830830 (POPTR_0003s12480) POPTRDRAFT_554339 (POPTR_0003s12490) POPTRDRAFT_757485 (POPTR_0003s12500) POPTRDRAFT_757486 (POPTR_0003s12510) POPTRDRAFT_554342 (POPTR_0003s12520) POPTRDRAFT_554343 (POPTR_0003s12530) ADF3 (POPTR_0003s12550) POPTR_0003s12560 POPTRDRAFT_554346 (POPTR_0003s12570) POPTRDRAFT_712519 (POPTR_0003s12580) POPTRDRAFT_817349 (POPTR_0003s12590) POPTRDRAFT_646601 (POPTR_0003s12600) PTRCGPX3_2 (POPTR_0003s12620) POPTRDRAFT_415417 (POPTR_0003s12630) POPTRDRAFT_799942 (POPTR_0003s12640) POPTR_0003s12650 POPTRDRAFT_799943 (POPTR_0003s12660) POPTR_0003s12670 POPTRDRAFT_817354 (POPTR_0003s12680) Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:2 Vv02s0025g03530 Vv02s0025g03550 Vv02s0025g03560 Vv02s0025g03570 Vv02s0025g03580 Vv02s0025g03590 Vv02s0025g03600 Vv02s0025g03610 Vv02s0025g03620 Vv02s0025g03630 Vv02s0025g03640 Vv02s0025g03650 Vv02s0025g03660 Vv02s0025g03670 Vv02s0025g03690 Vv02s0025g03700 Vv02s0025g03710 Vv02s0025g03720 Vv02s0025g03730 Vv02s0025g03740 Vv02s0025g03750 Vv02s0025g03760 Vv02s0025g03770 Vv02s0025g03780 Vv02s0025g03790 Vv02s0025g03800 Vv02s0025g03810 Vv02s0025g03820 Vv02s0025g03830 GRMZM2G579667 TreeBeST003084.W.b.a TreeBeST003084.W.b.a GRMZM2G114459 SB01G050280 (Sb01g050280) Si033838m.g GRMZM2G361164 EPlGT00140000016672 EPlGT00140000016672 ORGLA03G0002000 GRMZM5G820530 GRMZM2G137296 TreeBeST000047.@B TreeBeST000047.@B.c TreeBeST000047.@B.c GRMZM2G109725 Si036468m.g TreeBeST000047.@B BRADI1G78110 TreeBeST000047.@B TreeBeST000047.@B OS03G0107000 (BGIOSGA011606) LOC_Os03g01660 ORGLA03G0003300 TreeBeST000047.Z.b PGSC0003DMG400029928 (PGSC0003DMG400029928) Solyc06g036070.2 GRMZM2G411063 Bra021598 (Bra021598) TreeBeST001012.G.c TreeBeST001012.G.c GRMZM2G060265 SB01G050333 (Sb01g050333) Si035728m.g BRADI1G78230 OS03G0103400 (BGIOSGA011665) GRMZM2G461427 TreeBeST008628.L TreeBeST008628.L TreeBeST008628.L TreeBeST008628.L TreeBeST008628.L TUBB1 (GRMZM2G164696) SB01G050310 (Sb01g050310) Si039761m.g TreeBeST008628.L BRADI1G78210 TreeBeST008628.L TreeBeST008628.L OS03G0105600 (BGIOSGA011667) LOC_Os03g01530 ORGLA03G0002100 GSMUA_Achr4G11980_001 TreeBeST008628.L TreeBeST008628.L.a PGSC0003DMG400020850 (PGSC0003DMG400020850) Solyc06g005910.2 TreeBeST008628.L.b PGSC0003DMG400030431 (PGSC0003DMG400030431) Solyc06g076640.2 TreeBeST008628.L TreeBeST008628.L TreeBeST008628.L Carubv10023206m.g TreeBeST008628.L 481870 (fgenesh2_kg.4__930__AT2G29550.1) TUB7 (AT2G29550) TreeBeST008628.L TreeBeST008628.L Tp4g12280 Thhalv10016651m.g Bra018379 (Bra018379) Bra039987 (Bra039987) evm.TU.supercontig_112.92 TreeBeST008628.J MLOC_59698 TreeBeST008628.J TreeBeST008628.J.a PGSC0003DMG400011088 (PGSC0003DMG400011088) Solyc10g085020.1 TreeBeST008628.J.b PGSC0003DMG400019131 (PGSC0003DMG400019131) Solyc10g086760.1 TreeBeST008628.J Vv08s0007g01630 TreeBeST008628.C TreeBeST008628.J TUB1 (POPTR_0001s25410) TUB2 (POPTR_0009s04500) TreeBeST008628.J Tc09_g030600 TreeBeST008628.J.e Carubv10017235m.g Carubv10018995m.g Carubv10017235m.g Carubv10018995m.g Tp2g25870 TreeBeST008628.J.f.a.a TreeBeST008628.J.f.a.b TreeBeST008628.J.f.a.a 496451 (fgenesh2_kg.8__2267__AT5G62690.1) TUB2 (AT5G62690) TUB3 (AT5G62700) Bra019493 (Bra019493) TreeBeST008628.J.f.a.b TreeBeST008628.J.f.a.b TreeBeST008628.J.f.a.a 485062 (fgenesh2_kg.5__1054__AT5G62700.1) TUB2 (AT5G62690) TUB3 (AT5G62700) Bra010114 (Bra010114) Bra018184 (Bra018184) Bra033796 (Bra033796) TreeBeST008628.J.f.b Tp5g14830 Thhalv10005520m.g Thhalv10010368m.g Thhalv10010369m.g Thhalv10010368m.g Thhalv10010369m.g TreeBeST008628.K evm.TU.supercontig_56.91 Tc05_g003210 TreeBeST008628.I TreeBeST008628.I PGSC0003DMG400029926 (PGSC0003DMG400029926) Solyc06g035970.2 TreeBeST008628.I TreeBeST008628.I Carubv10000948m.g TreeBeST008628.I 489245 (fgenesh2_kg.6__2379__AT5G23860.1) TUB8 (AT5G23860) TreeBeST008628.I Bra009710 (Bra009710) TreeBeST008628.I Thhalv10004208m.g Tp2g23420 Tp2g23430 TreeBeST008628.H chr5.CM0148.420.r2.m Thhalv10010366m.g TreeBeST008628.G GLYMA20G29840 TreeBeST008628.G.b Tc03_g020510 TreeBeST008628.G.b GLYMA10G37960 TreeBeST008628.G.b ppa005698m.g gene13266-v1.0-hybrid Vv16s0050g00260 Vv16s0050g00280 Vv16s0050g00380 TreeBeST008628.F TreeBeST008628.F PGSC0003DMG400014296 (PGSC0003DMG400014296) Solyc03g025730.2 TreeBeST008628.F TreeBeST008628.A TUB3 (POPTR_0001s09180) TUB9 (POPTR_0001s09330) TUB4 (POPTR_0003s12540) TUB10 (POPTR_0003s12690) Vv02s0025g03540 Vv02s0025g03680 TreeBeST000513.H.j.b TreeBeST000513.H.j.b GRMZM2G060296 SB01G050330 (Sb01g050330) Si034718m.g BRADI1G78220 TreeBeST000072.F AC193500.3_FG003 SB01G050390 (Sb01g050390) BRADI1G78290 TreeBeST002713.B TreeBeST002713.B TreeBeST002713.B GRMZM2G114469 SB01G050290 (Sb01g050290) Si035956m.g TreeBeST002713.B BRADI1G78180 TreeBeST002713.B TreeBeST002713.B OSJNBA0009C08.12 (BGIOSGA011614) LOC_Os03g01570 ORGLA03G0002400 TreeBeST001260.C.d TreeBeST001260.C.d TreeBeST001260.C.d ZmLsi2 (GRMZM2G158378) TreeBeST001260.C.d BRADI1G78100 TreeBeST001260.C.d TreeBeST001260.C.d ORGLA03G0003500 TreeBeST001260.A.a PGSC0003DMG400029930 (PGSC0003DMG400029930) Solyc06g036100.2 GRMZM2G379898 TreeBeST008812.I.b BRADI1G78250 TreeBeST008812.I.b TreeBeST008812.I.b QLTG-3-1 (BGIOSGA011664) ORGLA03G0001900 SB01G050360 (Sb01g050360) SB01G050420 (Sb01g050420) BRADI1G78240 TreeBeST000178.F.g GRMZM2G161540 SB01G050380 (Sb01g050380) BRADI1G78280 TreeBeST000178.D POPTR_0001s09260 POPTR_0003s12610 AC196173.3_FG001 GRMZM5G831937 GRMZM2G329177 TreeBeST009541.KB.b TreeBeST009541.KB.b TreeBeST009541.KB.b TreeBeST009541.IB BRADI1G78090 TreeBeST009541.IB TreeBeST009541.IB ORGLA03G0003600 AC195844.2_FG003 GRMZM2G162208 TreeBeST005249.B TreeBeST005249.B TreeBeST005249.B GRMZM2G458423 SB01G050260 (Sb01g050260) Si038664m.g TreeBeST005249.B BRADI1G78150 TreeBeST005249.B TreeBeST005249.B OsI_09648 (BGIOSGA011612) PAIR1 (LOC_Os03g01590) ORGLA03G0002700 MLOC_71487 GRMZM2G176952 GRMZM2G079891 GRMZM2G379918 GRMZM2G161560 SB01G050370 (Sb01g050370) GRMZM2G459354 GRMZM5G827690 TreeBeST001121.B.h TreeBeST001121.B.h TreeBeST001121.B.h GRMZM2G703466 SB01G050295 (Sb01g050295) TreeBeST001121.B.h BRADI1G78190 TreeBeST001121.B.h TreeBeST001121.B.h OSJNBA0009C08.11 (BGIOSGA011615) LOC_Os03g01550 ORGLA03G0002300 TreeBeST001121.B TreeBeST001121.A.b TreeBeST001121.A.b PGSC0003DMG400030342 (PGSC0003DMG400030342) Solyc06g076590.2 TreeBeST001121.A.b.e TreeBeST001121.A.b.e Carubv10022623m.g TreeBeST001121.A.b.e 481867 (fgenesh2_kg.4__927__AT2G29510.1) AT2G29510 (AT2G29510) TreeBeST001121.A.b.e TreeBeST001121.A.b.e Tp4g12240 Thhalv10016221m.g evm.TU.supercontig_112.98 MLOC_73079 Vv08s0007g01490 TreeBeST001121.A.b POPTRDRAFT_641130 (POPTR_0001s25340) POPTRDRAFT_557999 (POPTR_0009s04420) TreeBeST001121.A.b Tc09_g030660 Tc05_g003360 TreeBeST000123.XB.d TreeBeST000123.XB.d TreeBeST000123.XB.d GRMZM2G410990 Si034532m.g TreeBeST000123.XB.d TreeBeST000123.XB.d TreeBeST000123.XB.d OsI_09657 (BGIOSGA011671) LOC_Os03g01670 ORGLA03G0003400 Tp2g25850 TreeBeST000123.QB.b.d.b.d 951055 (scaffold_802942.1) AHA11 (AT5G62670) TreeBeST000123.QB.b.d.b.d TreeBeST000123.QB.b.d.b.d AHA11 (AT5G62670) Thhalv10003603m.g GRMZM5G826836