Reference Gene Name: BRADI2G34810 EnsemblPlants
Reference Species : Brachypodium distachyon
Root Species : Eukaryota 		Eukaryota Link Wikipedia to Brachypodium distachyon Link Ensembl
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Eukaryota speciation node (click to collapse) Eukaryota Click to hide this line (Viridiplantae) Viridiplantae speciation node (click to collapse) Viridiplantae Click to show this node (Embryophyta) Embryophyta duplication node (click to collapse) Click to hide this line (Embryophyta) Embryophyta speciation node (click to collapse) Embryophyta Click to hide this line (Tracheophyta) Tracheophyta speciation node (click to collapse) Tracheophyta Click to hide this line (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Magnoliophyta Click to hide this line (commelinids) commelinids speciation node (click to collapse) commelinids Click to show this node (Poaceae) Poaceae duplication node (click to collapse) Click to hide this line (Poaceae) Poaceae speciation node (click to collapse) Poaceae Click to hide this line (BEP clade) BEP clade speciation node (click to collapse) BEP clade Click to hide this line (Pooideae) Pooideae speciation node (click to collapse) Pooideae Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:2 Click to hide this line (Hordeum vulgare subsp. vulgare) Hordeum vulgare subsp. vulgare terminal node Hordeum vulgare subsp. vulgare - Chr:1 MLOC_57040 MLOC_57041 MLOC_20060 MLOC_77892 MLOC_61603 MLOC_3912 MLOC_58690 MLOC_59793 MLOC_59794 MLOC_38537 MLOC_21266 MLOC_64918 MLOC_10504 MLOC_59900 MLOC_72412 MLOC_64978 MLOC_769 PR-17D (MLOC_11960) MLOC_22823 MLOC_58230 MLOC_73604 MLOC_54615 MLOC_58884 MLOC_68602 MLOC_72498 MLOC_59618 MLOC_69003 MLOC_73987 Click to hide this line (Oryza) Oryza speciation node (click to collapse) Oryza Click to hide this line (Oryza sativa) Oryza sativa speciation node (click to collapse) Oryza sativa Click to hide this line (Oryza sativa Indica Group) Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:5 OS05G0156800 (BGIOSGA019216) OsI_18541 (BGIOSGA019219) P0676G05.20 (BGIOSGA019220) OsI_18543 (BGIOSGA019221) OSJNBA0017J22.2 (BGIOSGA019222) OsI_18552 (BGIOSGA019226) OsI_18553 (BGIOSGA019227) OsI_18554 (BGIOSGA018767) OSJNBA0034O12.7 (BGIOSGA018766) OsI_18558 (BGIOSGA019230) OsI_18559 (BGIOSGA018765) OsI_18560 (BGIOSGA018764) OsI_18559 (BGIOSGA019231) OsI_18562 (BGIOSGA018763) OsI_18563 (BGIOSGA018762) Click to hide this line (Oryza sativa Japonica Group) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:5 LOC_Os05g06550 LOC_Os05g06560 LOC_Os05g06570 LOC_Os05g06580 LOC_Os05g06590 LOC_Os05g06600 LOC_Os05g06610 LOC_Os05g06620 LOC_Os05g06630 LOC_Os05g06640 LOC_Os05g06650 LOC_Os05g06680 LOC_Os05g06730 LOC_Os05g06740 LOC_Os05g06780 LOC_Os05g06790 LOC_Os05g06800 LOC_Os05g06814 LOC_Os05g06830 LOC_Os05g06840 LOC_Os05g06850 LOC_Os05g06860 Click to hide this line (Oryza glaberrima) Oryza glaberrima terminal node Oryza glaberrima - Chr:5 ORGLA05G0037300 ORGLA05G0037400 ORGLA05G0038000 ORGLA05G0038100 ORGLA05G0038200 ORGLA05G0038600 ORGLA05G0039300 ORGLA05G0039400 ORGLA05G0039500 ORGLA05G0039600 ORGLA05G0039800 Click to hide this line (Oryza brachyantha) Oryza brachyantha terminal node Oryza brachyantha - Chr:5 OB05G13700 OB05G13710 OB05G13740 OB05G13750 OB05G13770 OB05G13880 OB05G13890 OB05G13910 OB05G13930 OB05G13940 OB05G13950 OB05G13960 OB05G13970 OB05G13980 OB05G13990 OB05G14000 Click to hide this line (Panicoideae) Panicoideae speciation node (click to collapse) Panicoideae Click to hide this line (Andropogoneae) Andropogoneae speciation node (click to collapse) Andropogoneae Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:9 SB09G004440 (Sb09g004440) SB09G004500 (Sb09g004500) SB09G004503 (Sb09g004503) SB09G004506 (Sb09g004506) SB09G004512 (Sb09g004512) SB09G004515 (Sb09g004515) SB09G004517 (Sb09g004517) SB09G004560 (Sb09g004560) SB09G004570 (Sb09g004570) SB09G004590 (Sb09g004590) SB09G004595 (Sb09g004595) SB09G004600 (Sb09g004600) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:8 GRMZM2G408989 AC205471.4_FG004 AC205471.4_FG003 AC205471.4_FG008 AC205471.4_FG007 GRMZM5G861659 GRMZM2G044866 GRMZM5G845309 GRMZM2G044797 GRMZM2G044771 GRMZM5G825324 GRMZM2G044744 GRMZM2G420684 GRMZM2G121117 AC187153.4_FG002 GRMZM2G350071 AC187826.3_FG007 GRMZM2G017142 GRMZM2G495829 GRMZM2G322287 GRMZM2G322267 GRMZM2G322258 AC187826.3_FG009 GRMZM2G479362 GRMZM2G034551 GRMZM2G369639 GRMZM2G059693 Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - scaffold_7 Si009464m.g Si012536m.g Si011198m.g Si011883m.g Si012151m.g Si011814m.g Si012178m.g Si013083m.g Si010095m.g Si012521m.g Si012991m.g Si012804m.g Si011617m.g Click to hide this line (Poaceae) Poaceae speciation node (click to collapse) Poaceae Click to hide this line (BEP clade) BEP clade speciation node (click to collapse) BEP clade Click to hide this line (Oryza) Oryza speciation node (click to collapse) Oryza Click to hide this line (Oryza sativa) Oryza sativa speciation node (click to collapse) Oryza sativa Click to hide this line (Oryza sativa Indica Group) Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:1 OsI_01698 (BGIOSGA001748) P0554D10.14 (BGIOSGA003408) P0554D10.15 (BGIOSGA001747) OsI_01702 (BGIOSGA003409) OsI_01704 (BGIOSGA001746) P0489E06.1 (BGIOSGA001745) P0554D10.27 (BGIOSGA001744) P0554D10.29 (BGIOSGA003412) OsI_01709 (BGIOSGA003413) OsI_01710 (BGIOSGA001743) OsI_01711 (BGIOSGA003414) OsI_01713 (BGIOSGA003416) B1140D12.1-2 (BGIOSGA003418) OS01G0332900 (BGIOSGA001739) OsI_01724 (BGIOSGA003420) OsI_01725 (BGIOSGA003421) OsI_01726 (BGIOSGA001738) OsI_01727 (BGIOSGA001737) OsI_01728 (BGIOSGA003422) OsI_01729 (BGIOSGA001736) OJ1008_F01.1 (BGIOSGA003423) B1151H08.44 (BGIOSGA003424) OsI_01732 (BGIOSGA003425) Click to hide this line (Oryza sativa Japonica Group) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:1 LOC_Os01g22710 LOC_Os01g22720 LOC_Os01g22730 LOC_Os01g22740 LOC_Os01g22750 LOC_Os01g22760 LOC_Os01g22770 LOC_Os01g22794 LOC_Os01g22810 LOC_Os01g22820 LOC_Os01g22830 LOC_Os01g22840 LOC_Os01g22850 LOC_Os01g22860 LOC_Os01g22880 LOC_Os01g22890 LOC_Os01g22900 LOC_Os01g22930 LOC_Os01g22990 LOC_Os01g23000 LOC_Os01g23010 LOC_Os01g23020 LOC_Os01g23040 LOC_Os01g23050 LOC_Os01g23060 Click to hide this line (Oryza glaberrima) Oryza glaberrima terminal node Oryza glaberrima - Chr:1 ORGLA01G0115400 ORGLA01G0115500 ORGLA01G0115600 ORGLA01G0115700 ORGLA01G0115800 ORGLA01G0115900 ORGLA01G0116000 ORGLA01G0116200 ORGLA01G0116400 ORGLA01G0116500 ORGLA01G0116600 ORGLA01G0116700 ORGLA01G0117000 ORGLA01G0117300 ORGLA01G0117400 ORGLA01G0117500 ORGLA01G0117600 ORGLA01G0117700 ORGLA01G0117800 ORGLA01G0117900 ORGLA01G0118000 ORGLA01G0118100 ORGLA01G0118200 ORGLA01G0118300 ORGLA01G0118400 Click to hide this line (Oryza brachyantha) Oryza brachyantha terminal node Oryza brachyantha - Chr:1 OB01G23490 OB01G23510 OB01G23520 OB01G23530 OB01G23540 OB01G23550 OB01G23560 OB01G23570 OB01G23580 OB01G23610 OB01G23620 OB01G23650 OB01G23690 OB01G23700 OB01G23710 OB01G23720 OB01G23730 OB01G23740 OB01G23750 OB01G23760 OB01G23770 OB01G23780 OB01G23790 Click to show this node (Pooideae) Pooideae speciation node (click to collapse) Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:2 BRADI2G12290 BRADI2G12300 BRADI2G12320 BRADI2G12347 BRADI2G12360 BRADI2G12380 BRADI2G12390 BRADI2G12400 BRADI2G12410 BRADI2G12427 BRADI2G12470 BRADI2G12480 BRADI2G12497 BRADI2G12510 BRADI2G12530 BRADI2G12550 BRADI2G12560 BRADI2G12570 Click to hide this line (Panicoideae) Panicoideae speciation node (click to collapse) Panicoideae Click to hide this line (Andropogoneae) Andropogoneae speciation node (click to collapse) Andropogoneae Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:3 SB03G013310 (Sb03g013310) SB03G013315 (Sb03g013315) SB03G013320 (Sb03g013320) SB03G013330 (Sb03g013330) SB03G013340 (Sb03g013340) SB03G013345 (Sb03g013345) SB03G013355 (Sb03g013355) SB03G013360 (Sb03g013360) SB03G013380 (Sb03g013380) SB03G013383 (Sb03g013383) SB03G013386 (Sb03g013386) SB03G013390 (Sb03g013390) SB03G013420 (Sb03g013420) SB03G013430 (Sb03g013430) SB03G013440 (Sb03g013440) SB03G013490 (Sb03g013490) SB03G013500 (Sb03g013500) SB03G013510 (Sb03g013510) SB03G013520 (Sb03g013520) SB03G013535 (Sb03g013535) SB03G013545 (Sb03g013545) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:3 AC196421.3_FG002 GRMZM2G160889 GRMZM2G160958 AC196421.3_FG005 GRMZM2G071900 GRMZM2G467435 GRMZM2G165746 GRMZM2G165788 AC195894.3_FG001 AC183788.3_FG002 GRMZM2G077685 GRMZM2G087109 GRMZM2G084759 GRMZM2G084694 GRMZM2G034188 AC213610.3_FG001 GRMZM2G013395 GRMZM2G123804 GRMZM5G872943 GRMZM2G091088 AC197526.3_FG003 GRMZM2G034613 GRMZM2G117729 Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - scaffold_5 Si002185m.g Si005294m.g Si002773m.g Si000775m.g Si005622m.g Si004291m.g Si005088m.g Si004128m.g Si001510m.g Si000498m.g Si003376m.g Si000681m.g Si004244m.g Si004591m.g Si005137m.g Si000330m.g Si005029m.g Si004203m.g Si005073m.g Si000666m.g Click to show this node (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis duplication node (click to collapse) Click to show this node (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis duplication node (click to collapse) Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:1 GSMUA_Achr1G24820_001 (GSMUA_Achr1G24820_001) GSMUA_Achr1G24830_001 (GSMUA_Achr1G24830_001) GSMUA_Achr1G24840_001 (GSMUA_Achr1G24840_001) GSMUA_Achr1G24850_001 (GSMUA_Achr1G24850_001) GSMUA_Achr1G24860_001 (GSMUA_Achr1G24860_001) GSMUA_Achr1G24870_001 (GSMUA_Achr1G24870_001) GSMUA_Achr1G24880_001 (GSMUA_Achr1G24880_001) GSMUA_Achr1G24890_001 (GSMUA_Achr1G24890_001) GSMUA_Achr1G24900_001 (GSMUA_Achr1G24900_001) GSMUA_Achr1G24910_001 (GSMUA_Achr1G24910_001) GSMUA_Achr1G24920_001 (GSMUA_Achr1G24920_001) GSMUA_Achr1G24930_001 (GSMUA_Achr1G24930_001) GSMUA_Achr1G24940_001 (GSMUA_Achr1G24940_001) GSMUA_Achr1G24950_001 (GSMUA_Achr1G24950_001) GSMUA_Achr1G24960_001 (GSMUA_Achr1G24960_001) GSMUA_Achr1G24980_001 (GSMUA_Achr1G24980_001) GSMUA_Achr1G24990_001 (GSMUA_Achr1G24990_001) GSMUA_Achr1G25000_001 (GSMUA_Achr1G25000_001) GSMUA_Achr1G25010_001 (GSMUA_Achr1G25010_001) GSMUA_Achr1G25020_001 (GSMUA_Achr1G25020_001) GSMUA_Achr1G25030_001 (GSMUA_Achr1G25030_001) GSMUA_Achr1G25040_001 (GSMUA_Achr1G25040_001) GSMUA_Achr1G25050_001 (GSMUA_Achr1G25050_001) GSMUA_Achr1G25060_001 (GSMUA_Achr1G25060_001) GSMUA_Achr1G25070_001 (GSMUA_Achr1G25070_001) GSMUA_Achr1G25080_001 (GSMUA_Achr1G25080_001) GSMUA_Achr1G25090_001 (GSMUA_Achr1G25090_001) GSMUA_Achr1G25100_001 (GSMUA_Achr1G25100_001) GSMUA_Achr1G25110_001 (GSMUA_Achr1G25110_001) GSMUA_Achr1G25120_001 (GSMUA_Achr1G25120_001) Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:2 GSMUA_Achr2G06900_001 (GSMUA_Achr2G06900_001) GSMUA_Achr2G06910_001 (GSMUA_Achr2G06910_001) GSMUA_Achr2G06920_001 (GSMUA_Achr2G06920_001) GSMUA_Achr2G06930_001 (GSMUA_Achr2G06930_001) GSMUA_Achr2G06940_001 (GSMUA_Achr2G06940_001) GSMUA_Achr2G06950_001 (GSMUA_Achr2G06950_001) GSMUA_Achr2G06960_001 (GSMUA_Achr2G06960_001) GSMUA_Achr2G06970_001 (GSMUA_Achr2G06970_001) GSMUA_Achr2G06980_001 (GSMUA_Achr2G06980_001) GSMUA_Achr2G06990_001 (GSMUA_Achr2G06990_001) GSMUA_Achr2G07000_001 (GSMUA_Achr2G07000_001) GSMUA_Achr2G07010_001 (GSMUA_Achr2G07010_001) GSMUA_Achr2G07020_001 (GSMUA_Achr2G07020_001) GSMUA_Achr2G07030_001 (GSMUA_Achr2G07030_001) GSMUA_Achr2G07040_001 (GSMUA_Achr2G07040_001) GSMUA_Achr2G07060_001 (GSMUA_Achr2G07060_001) GSMUA_Achr2G07070_001 (GSMUA_Achr2G07070_001) GSMUA_Achr2G07080_001 (GSMUA_Achr2G07080_001) GSMUA_Achr2G07090_001 (GSMUA_Achr2G07090_001) GSMUA_Achr2G07100_001 (GSMUA_Achr2G07100_001) GSMUA_Achr2G07110_001 (GSMUA_Achr2G07110_001) GSMUA_Achr2G07120_001 (GSMUA_Achr2G07120_001) GSMUA_Achr2G07130_001 (GSMUA_Achr2G07130_001) GSMUA_Achr2G07140_001 (GSMUA_Achr2G07140_001) GSMUA_Achr2G07150_001 (GSMUA_Achr2G07150_001) GSMUA_Achr2G07160_001 (GSMUA_Achr2G07160_001) GSMUA_Achr2G07170_001 (GSMUA_Achr2G07170_001) GSMUA_Achr2G07180_001 (GSMUA_Achr2G07180_001) GSMUA_Achr2G07190_001 (GSMUA_Achr2G07190_001) GSMUA_Achr2G07200_001 (GSMUA_Achr2G07200_001) Click to hide this line (Musa acuminata subsp. malaccensis) Musa acuminata subsp. malaccensis terminal node Musa acuminata subsp. malaccensis - Chr:8 GSMUA_Achr8G29750_001 (GSMUA_Achr8G29750_001) GSMUA_Achr8G29760_001 (GSMUA_Achr8G29760_001) GSMUA_Achr8G29770_001 (GSMUA_Achr8G29770_001) GSMUA_Achr8G29780_001 (GSMUA_Achr8G29780_001) GSMUA_Achr8G29790_001 (GSMUA_Achr8G29790_001) GSMUA_Achr8G29800_001 (GSMUA_Achr8G29800_001) GSMUA_Achr8G29810_001 (GSMUA_Achr8G29810_001) GSMUA_Achr8G29820_001 (GSMUA_Achr8G29820_001) GSMUA_Achr8G29830_001 (GSMUA_Achr8G29830_001) GSMUA_Achr8G29840_001 (GSMUA_Achr8G29840_001) GSMUA_Achr8G29850_001 (GSMUA_Achr8G29850_001) GSMUA_Achr8G29860_001 (GSMUA_Achr8G29860_001) GSMUA_Achr8G29870_001 (GSMUA_Achr8G29870_001) GSMUA_Achr8G29880_001 (GSMUA_Achr8G29880_001) GSMUA_Achr8G29890_001 (GSMUA_Achr8G29890_001) GSMUA_Achr8G29910_001 (GSMUA_Achr8G29910_001) GSMUA_Achr8G29920_001 (GSMUA_Achr8G29920_001) GSMUA_Achr8G29930_001 (GSMUA_Achr8G29930_001) GSMUA_Achr8G29940_001 (GSMUA_Achr8G29940_001) GSMUA_Achr8G29950_001 (GSMUA_Achr8G29950_001) GSMUA_Achr8G29960_001 (GSMUA_Achr8G29960_001) GSMUA_Achr8G29970_001 (GSMUA_Achr8G29970_001) GSMUA_Achr8G29980_001 (GSMUA_Achr8G29980_001) GSMUA_Achr8G29990_001 (GSMUA_Achr8G29990_001) GSMUA_Achr8G30000_001 (GSMUA_Achr8G30000_001) GSMUA_Achr8G30010_001 (GSMUA_Achr8G30010_001) GSMUA_Achr8G30020_001 (GSMUA_Achr8G30020_001) GSMUA_Achr8G30030_001 (GSMUA_Achr8G30030_001) GSMUA_Achr8G30040_001 (GSMUA_Achr8G30040_001) GSMUA_Achr8G30050_001 (GSMUA_Achr8G30050_001) Click to show this node (core eudicotyledons) core eudicotyledons duplication node (click to collapse) Click to hide this line (core eudicotyledons) core eudicotyledons speciation node (click to collapse) core eudicotyledons Click to hide this line (rosids) rosids speciation node (click to collapse) rosids Click to hide this line (fabids) fabids speciation node (click to collapse) fabids Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm19 GLYMA19G41400 GLYMA19G41410 GLYMA19G41420 GLYMA19G41430 GLYMA19G41440 GLYMA19G41450 GLYMA19G41460 GLYMA19G41476 GLYMA19G41482 GLYMA19G41488 GLYMA19G41494 GLYMA19G41500 GLYMA19G41510 GLYMA19G41520 GLYMA19G41540 GLYMA19G41550 GLYMA19G41555 GLYMA19G41560 GLYMA19G41580 GLYMA19G41590 GLYMA19G41601 GLYMA19G41610 GLYMA19G41630 GLYMA19G41640 GLYMA19G41651 GLYMA19G41660 GLYMA19G41670 GLYMA19G41680 PDIS-2 (GLYMA19G41690) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm03 GLYMA03G38780 GLYMA03G38800 GLYMA03G38810 GLYMA03G38820 GLYMA03G38830 GLYMA03G38840 GLYMA03G38850 GLYMA03G38860 GLYMA03G38870 GLYMA03G38880 GLYMA03G38901 GLYMA03G38910 GLYMA03G38921 GLYMA03G38930 GLYMA03G38950 GLYMA03G38960 GLYMA03G38970 GLYMA03G38980 GLYMA03G38990 GLYMA03G39000 GLYMA03G39010 GLYMA03G39020 GLYMA03G39030 GLYMA03G39041 GLYMA03G39050 GLYMA03G39060 GLYMA03G39070 GLYMA03G39081 GLYMA03G39090 Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm10 GLYMA10G28436 GLYMA10G28450 GLYMA10G28460 GLYMA10G28475 GLYMA10G28490 GLYMA10G28500 GLYMA10G28511 GLYMA10G28521 GSK-3 (GLYMA10G28530) GLYMA10G28540 GLYMA10G28551 GMA.55958 (GLYMA10G28560) GLYMA10G28581 GLYMA10G28600 GOLS (GLYMA10G28610) GLYMA10G28631 GLYMA10G28640 GLYMA10G28650 GLYMA10G28661 GLYMA10G28671 GLYMA10G28680 GLYMA10G28690 GLYMA10G28700 GLYMA10G28710 GLYMA10G28730 GLYMA10G28740 GLYMA10G28746 GLYMA10G28753 GLYMA10G28760 GLYMA10G28781 Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:Gm20 GLYMA20G22550 GLYMA20G22540 GLYMA20G22562 GLYMA20G22574 GLYMA20G22587 GLYMA20G22600 GLYMA20G22611 GLYMA20G22620 GLYMA20G22630 GLYMA20G22641 GLYMA20G22650 GLYMA20G22660 GLYMA20G22680 GLYMA20G22690 GLYMA20G22700 GLYMA20G22731 GLYMA20G22741 GLYMA20G22751 GLYMA20G22760 GLYMA20G22780 GLYMA20G22790 GLYMA20G22800 GLYMA20G22810 GLYMA20G22820 GLYMA20G22830 GLYMA20G22840 GLYMA20G22850 GLYMA20G22860 GLYMA20G22865 GLYMA20G22870 Click to show this node (Populus trichocarpa) Populus trichocarpa duplication node (click to collapse) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:5 POPTRDRAFT_678937 (POPTR_0005s01230) POPTR_0005s01240 XM_002332471.1 (POPTR_0005s01250) XM_002332475.1 (POPTR_0005s01260) POPTRDRAFT_268224 (POPTR_0005s01270) POPTRDRAFT_581651 (POPTR_0005s01280) POPTR_0005s01290 POPTRDRAFT_588828 (POPTR_0005s01300) POPTRDRAFT_581652 (POPTR_0005s01310) XM_002333420.1 (POPTR_0005s01320) POPTRDRAFT_784634 (POPTR_0005s01330) POPTRDRAFT_588236 (POPTR_0005s01340) POPTRDRAFT_581660 (POPTR_0005s01350) CHR954 (POPTR_0005s01360) POPTR_0005s01370 POPTRDRAFT_784645 (POPTR_0005s01390) POPTR_0005s01400 POPTR_0005s01410 POPTRDRAFT_837155 (POPTR_0005s01420) POPTRDRAFT_268246 (POPTR_0005s01430) POPTRDRAFT_784650 (POPTR_0005s01440) POPTRDRAFT_581670 (POPTR_0005s01450) POPTR_0005s01460 POPTRDRAFT_581672 (POPTR_0005s01470) POPTRDRAFT_927440 (POPTR_0005s01480) POPTRDRAFT_581677 (POPTR_0005s01490) POPTRDRAFT_581679 (POPTR_0005s01500) POPTR_0005s01510 POPTRDRAFT_268278 (POPTR_0005s01520) POPTRDRAFT_671549 (POPTR_0005s01530) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:13 POPTRDRAFT_662559 (POPTR_0013s00620) POPTRDRAFT_570678 (POPTR_0013s00630) POPTRDRAFT_892666 (POPTR_0013s00640) POPTRDRAFT_834444 (POPTR_0013s00650) POPTRDRAFT_834445 (POPTR_0013s00660) POPTR_0013s00670 POPTRDRAFT_773568 (POPTR_0013s00680) POPTRDRAFT_570684 (POPTR_0013s00690) POPTRDRAFT_570684 (POPTR_0013s00700) POPTRDRAFT_570685 (POPTR_0013s00710) POPTRDRAFT_893502 (POPTR_0013s00720) GOLS3 (POPTR_0013s00730) POPTR_0013s00740 POPTR_0013s00750 POPTR_0013s00760 POPTRDRAFT_806728 (POPTR_0013s00780) POPTRDRAFT_1096006 (POPTR_0013s00790) POPTRDRAFT_570694 (POPTR_0013s00800) POPTRDRAFT_570695 (POPTR_0013s00810) POPTRDRAFT_570696 (POPTR_0013s00820) POPTR_0013s00830 POPTR_0013s00840 POPTRDRAFT_570697 (POPTR_0013s00850) POPTRDRAFT_570698 (POPTR_0013s00860) POPTR_0013s00870 POPTRDRAFT_570700 (POPTR_0013s00880) POPTRDRAFT_773580 (POPTR_0013s00890) XM_002319443.1 (POPTR_0013s00900) POPTRDRAFT_570703 (POPTR_0013s00910) POPTRDRAFT_570704 (POPTR_0013s00920) Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae Click to show this node (Brassica rapa subsp. pekinensis) Brassica rapa subsp. pekinensis duplication node (click to collapse) Click to hide this line (Brassica rapa subsp. pekinensis) Brassica rapa subsp. pekinensis terminal node Brassica rapa subsp. pekinensis - Chr:A08 Bra030785 (Bra030785) Bra030784 (Bra030784) Bra030783 (Bra030783) Bra030782 (Bra030782) Bra030781 (Bra030781) Bra030780 (Bra030780) Bra030779 (Bra030779) Bra030778 (Bra030778) Bra030777 (Bra030777) Bra030775 (Bra030775) Bra030774 (Bra030774) Bra030773 (Bra030773) Bra030772 (Bra030772) Bra030771 (Bra030771) Bra030770 (Bra030770) Bra030768 (Bra030768) Bra030767 (Bra030767) Bra030766 (Bra030766) Bra030765 (Bra030765) Bra030764 (Bra030764) Bra030763 (Bra030763) Bra030762 (Bra030762) Bra030761 (Bra030761) Bra030760 (Bra030760) Bra030759 (Bra030759) Bra030758 (Bra030758) Bra030757 (Bra030757) Bra030756 (Bra030756) Bra030755 (Bra030755) Bra030754 (Bra030754) Click to hide this line (Brassica rapa subsp. pekinensis) Brassica rapa subsp. pekinensis terminal node Brassica rapa subsp. pekinensis - Chr:A06 Bra018580 (Bra018580) Bra018579 (Bra018579) Bra018578 (Bra018578) Bra018577 (Bra018577) Bra018576 (Bra018576) Bra018575 (Bra018575) Bra018574 (Bra018574) Bra018573 (Bra018573) Bra018572 (Bra018572) Bra018571 (Bra018571) Bra018570 (Bra018570) Bra018569 (Bra018569) Bra018568 (Bra018568) Bra018567 (Bra018567) Bra018565 (Bra018565) Bra018564 (Bra018564) Bra020031 (Bra020031) Bra020030 (Bra020030) Bra020029 (Bra020029) Bra020028 (Bra020028) Bra020027 (Bra020027) Bra020026 (Bra020026) Bra020024 (Bra020024) Bra020023 (Bra020023) Bra020022 (Bra020022) Bra020021 (Bra020021) Bra020020 (Bra020020) Bra020019 (Bra020019) Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:1 AT1G09195 (AT1G09195) AT1G09200 (AT1G09200) CRT1b (AT1G09210) AT1G09220 (AT1G09220) AT1G09230 (AT1G09230) NAS3 (AT1G09240) AT1G09245 (AT1G09245) AT1G09250 (AT1G09250) AT1G09260 (AT1G09260) IMPA-4 (AT1G09270) AT1G09280 (AT1G09280) AT1G09290 (AT1G09290) AT1G09300 (AT1G09300) AT1G09310 (AT1G09310) AT1G09320 (AT1G09320) CSP41B (AT1G09340) AtGolS3 (AT1G09350) AT1G09360 (AT1G09360) AT1G09370 (AT1G09370) AT1G09380 (AT1G09380) AT1G09400 (AT1G09400) AT1G09410 (AT1G09410) NIMIN-3 (AT1G09415) G6PD4 (AT1G09420) ACLA-3 (AT1G09430) AT1G09440 (AT1G09440) AT1G09450 (AT1G09450) AT1G09460 (AT1G09460) AT1G09470 (AT1G09470) Click to hide this line (Arabidopsis lyrata subsp. lyrata) Arabidopsis lyrata subsp. lyrata terminal node Arabidopsis lyrata subsp. lyrata - Chr:1 XM_002892445.1 (fgenesh2_kg.1__964__AT1G09210.1) XM_002892446.1 (scaffold_100955.1) XM_002892447.1 (fgenesh2_kg.1__965__AT1G09220.1) XM_002892448.1 (fgenesh2_kg.1__966__AT1G09230.1) XM_002889691.1 (fgenesh2_kg.1__967__AT1G09240.1) XM_002892449.1 (scaffold_100958.1) XM_002889692.1 (fgenesh1_pg.C_scaffold_1000770) XM_002892450.1 (scaffold_100960.1) XM_002889693.1 (fgenesh2_kg.1__968__AT1G09250.1) XM_002889694.1 (scaffold_100962.1) XM_002892451.1 (fgenesh2_kg.1__972__AT1G09280.1) XM_002892452.1 (fgenesh2_kg.1__973__AT1G09290.1) XM_002889695.1 (fgenesh2_kg.1__975__AT1G09300.1) XM_002889696.1 (fgenesh2_kg.1__976__AT1G09310.1) XM_002892453.1 (fgenesh2_kg.1__977__AT1G09320.1) XM_002889697.1 (fgenesh2_kg.1__979__AT1G09340.1) XM_002889698.1 (fgenesh1_pm.C_scaffold_1000758) XM_002889699.1 (scaffold_100971.1) XM_002892455.1 (scaffold_100972.1) XM_002889700.1 (fgenesh2_kg.1__982__AT1G09370.1) XM_002892456.1 (scaffold_100974.1) XM_002892457.1 (scaffold_100976.1) XM_002889702.1 (fgenesh2_kg.1__986__AT1G09410.1) XM_002892458.1 (fgenesh2_kg.1__987__AT1G09415.1) XM_002892459.1 (fgenesh2_kg.1__988__AT1G09420.1) XM_002889703.1 (fgenesh2_kg.1__990__AT1G09430.1) XM_002892460.1 (fgenesh1_pm.C_scaffold_1000767) XM_002889704.1 (fgenesh1_pm.C_scaffold_1000768) XM_002889705.1 (Al_scaffold_0001_908) Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:14 VIT_14s0060g00670 VIT_14s0060g00690 VIT_14s0060g00700 VIT_14s0060g00710 VIT_14s0060g00720 VIT_14s0060g00730 VIT_14s0060g00740 VIT_14s0060g00750 VIT_14s0060g00760 VIT_14s0060g00770 VIT_14s0060g00790 VIT_14s0060g00800 VIT_14s0060g00810 VIT_14s0060g00820 VIT_14s0060g00840 VIT_14s0060g00850 VIT_14s0060g00860 VIT_14s0060g00870 VIT_14s0060g00880 VIT_14s0060g00890 VIT_14s0060g00900 VIT_14s0060g00910 VIT_14s0060g00920 VIT_14s0060g00930 VIT_14s0060g00940 VIT_14s0060g00950 VIT_14s0060g00960 VIT_14s0060g00970 VIT_14s0060g00980 Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:6 Solyc06g073120.2 Solyc06g073130.2 Solyc06g073140.1 Solyc06g073150.2 Solyc06g073160.2 Solyc06g073170.1 CIP1 (Solyc06g073180.2) FRK2 (Solyc06g073190.2) Solyc06g073200.2 Solyc06g073210.2 Solyc06g073220.1 Solyc06g073230.2 Solyc06g073240.2 Solyc06g073250.1 Solyc06g073260.2 Solyc06g073280.2 Solyc06g073290.1 Solyc06g073300.1 Solyc06g073310.2 GGP (Solyc06g073320.2) Solyc06g073330.2 Solyc06g073340.2 Solyc06g073350.2 Solyc06g073360.2 Solyc06g073370.2 Solyc06g073380.2 FTA (Solyc06g073390.2) Solyc06g073400.2 Solyc06g073410.2 Solyc06g073420.2 Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:6 PGSC0003DMG400026917 (PGSC0003DMG400026917) PGSC0003DMG400027102 (PGSC0003DMG400027102) PGSC0003DMG400027101 (PGSC0003DMG400027101) PGSC0003DMG400027100 (PGSC0003DMG400027100) PGSC0003DMG400027019 (PGSC0003DMG400027019) PGSC0003DMG400027018 (PGSC0003DMG400027018) PGSC0003DMG400027017 (PGSC0003DMG400027017) PGSC0003DMG400026916 (PGSC0003DMG400026916) PGSC0003DMG402027016 (PGSC0003DMG402027016) PGSC0003DMG401027016 (PGSC0003DMG401027016) PGSC0003DMG402027015 (PGSC0003DMG402027015) PGSC0003DMG401027015 (PGSC0003DMG401027015) PGSC0003DMG400026915 (PGSC0003DMG400026915) PGSC0003DMG400026914 (PGSC0003DMG400026914) PGSC0003DMG400026913 (PGSC0003DMG400026913) PGSC0003DMG400027014 (PGSC0003DMG400027014) PGSC0003DMG400027013 (PGSC0003DMG400027013) RPL27 (PGSC0003DMG400026911) PGSC0003DMG400026910 (PGSC0003DMG400026910) PGSC0003DMG400027012 (PGSC0003DMG400027012) PGSC0003DMG400026909 (PGSC0003DMG400026909) PGSC0003DMG400027011 (PGSC0003DMG400027011) PGSC0003DMG400026908 (PGSC0003DMG400026908) PGSC0003DMG400027010 (PGSC0003DMG400027010) PGSC0003DMG400026907 (PGSC0003DMG400026907) PGSC0003DMG400027009 (PGSC0003DMG400027009) PGSC0003DMG401026906 (PGSC0003DMG401026906) PGSC0003DMG402026906 (PGSC0003DMG402026906) PGSC0003DMG400027008 (PGSC0003DMG400027008) PGSC0003DMG402027007 (PGSC0003DMG402027007) Click to show this node (core eudicotyledons) core eudicotyledons speciation node (click to collapse) Click to hide this line (rosids) rosids speciation node (click to collapse) rosids Click to show this node (fabids) fabids speciation node (click to collapse) Click to show this node (Populus trichocarpa) Populus trichocarpa duplication node (click to collapse) Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:2 POPTRDRAFT_816745 (POPTR_0002s19090) POPTRDRAFT_552582 (POPTR_0002s19100) POPTRDRAFT_830470 (POPTR_0002s19110) POPTRDRAFT_755697 (POPTR_0002s19120) POPTRDRAFT_552580 (POPTR_0002s19130) POPTRDRAFT_755695 (POPTR_0002s19140) POPTR_0002s19150 POPTRDRAFT_755694 (POPTR_0002s19160) POPTRDRAFT_552579 (POPTR_0002s19170) POPTRDRAFT_1072652 (POPTR_0002s19190) POPTRDRAFT_552576 (POPTR_0002s19200) POPTRDRAFT_644880 (POPTR_0002s19210) POPTRDRAFT_552573 (POPTR_0002s19220) POPTRDRAFT_830464 (POPTR_0002s19230) MYB210 (POPTR_0002s19250) POPTRDRAFT_755682 (POPTR_0002s19270) POPTR_0002s19280 POPTRDRAFT_816735 (POPTR_0002s19290) POPTRDRAFT_816734 (POPTR_0002s19300) POPTR_0002s19310 POPTR_0002s19320 POPTRDRAFT_850795 (POPTR_0002s19330) POPTRDRAFT_799231 (POPTR_0002s19340) POPTRDRAFT_755676 (POPTR_0002s19350) POPTRDRAFT_552557 (POPTR_0002s19360) POPTRDRAFT_710316 (POPTR_0002s19370) POPTR_0002s19380 POPTR_0002s19390 Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:14 POPTRDRAFT_774653 (POPTR_0014s11070) POPTRDRAFT_807459 (POPTR_0014s11080) POPTRDRAFT_1098924 (POPTR_0014s11090) POPTR_0014s11100 POPTRDRAFT_245464 (POPTR_0014s11110) POPTRDRAFT_664301 (POPTR_0014s11120) POPTRDRAFT_774659 (POPTR_0014s11130) POPTR_0014s11140 POPTR_0014s11150 POPTRDRAFT_572568 (POPTR_0014s11160) POPTRDRAFT_572569 (POPTR_0014s11170) POPTRDRAFT_644880 (POPTR_0014s11180) POPTR_0014s11190 POPTR_0014s11200 POPTRDRAFT_572572 (POPTR_0014s11210) MYB202 (POPTR_0014s11230) POPTRDRAFT_245492 (POPTR_0014s11240) POPTRDRAFT_807470 (POPTR_0014s11270) POPTRDRAFT_572580 (POPTR_0014s11280) POPTRDRAFT_572581 (POPTR_0014s11290) POPTRDRAFT_1098956 (POPTR_0014s11300) POPTRDRAFT_572583 (POPTR_0014s11310) POPTRDRAFT_774677 (POPTR_0014s11320) POPTRDRAFT_572587 (POPTR_0014s11330) POPTRDRAFT_774679 (POPTR_0014s11340) XM_002320931.1 (POPTR_0014s11350) POPTRDRAFT_774681 (POPTR_0014s11360) POPTRDRAFT_572594 (POPTR_0014s11370) Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:7 VIT_07s0005g01810 VIT_07s0005g01820 VIT_07s0005g01830 VIT_07s0005g01840 VIT_07s0005g01850 VIT_07s0005g01860 VIT_07s0005g01870 VIT_07s0005g01880 VIT_07s0005g01890 VIT_07s0005g01900 VIT_07s0005g01910 VIT_07s0005g01930 VIT_07s0005g01940 VIT_07s0005g01950 VIT_07s0005g01970 VIT_07s0005g01980 VIT_07s0005g01990 VIT_07s0005g02000 VIT_07s0005g02010 VIT_07s0005g02020 VIT_07s0005g02060 VIT_07s0005g02070 VIT_07s0005g02080 VIT_07s0005g02090 VIT_07s0005g02100 VIT_07s0005g02110 Click to show this node (Selaginella moellendorffii) Selaginella moellendorffii duplication node (click to collapse) Click to hide this line (Selaginella moellendorffii) Selaginella moellendorffii terminal node Selaginella moellendorffii - Chr:GL377580 SELMODRAFT_411445 (SELMODRAFT_411445) SELMODRAFT_69978 (SELMODRAFT_69978) SELMODRAFT_171632 (SELMODRAFT_171632) SELMODRAFT_7955 (SELMODRAFT_7955) SELMODRAFT_94270 (SELMODRAFT_94270) SELMODRAFT_267440 (SELMODRAFT_267440) SELMODRAFT_94162 (SELMODRAFT_94162) SELMODRAFT_411449 (SELMODRAFT_411449) SELMODRAFT_94540 (SELMODRAFT_94540) MADS12-2 (SELMODRAFT_449669) SELMODRAFT_441251 (SELMODRAFT_441251) SELMODRAFT_72427 (SELMODRAFT_72427) SELMODRAFT_441252 (SELMODRAFT_441252) SELMODRAFT_147316 (SELMODRAFT_147316) SELMODRAFT_267442 (SELMODRAFT_267442) SELMODRAFT_94320 (SELMODRAFT_94320) SELMODRAFT_94465 (SELMODRAFT_94465) SELMODRAFT_270868 (SELMODRAFT_270868) GT68A1 (SELMODRAFT_94197) SELMODRAFT_94085 (SELMODRAFT_94085) SELMODRAFT_94386 (SELMODRAFT_94386) SELMODRAFT_227995 (SELMODRAFT_227995) SELMODRAFT_94153 (SELMODRAFT_94153) SELMODRAFT_411462 (SELMODRAFT_411462) SELMODRAFT_231660 (SELMODRAFT_231660) SELMODRAFT_69062 (SELMODRAFT_69062) SELMODRAFT_171659 (SELMODRAFT_171659) SELMODRAFT_231661 (SELMODRAFT_231661) SELMODRAFT_93997 (SELMODRAFT_93997) ACR3 (SELMODRAFT_450027) Click to hide this line (Selaginella moellendorffii) Selaginella moellendorffii terminal node Selaginella moellendorffii - Chr:GL377577 SELMODRAFT_170725 (SELMODRAFT_170725) SELMODRAFT_7956 (SELMODRAFT_7956) SELMODRAFT_91653 (SELMODRAFT_91653) SmABCC5 (SELMODRAFT_267271) SELMODRAFT_231324 (SELMODRAFT_231324) SELMODRAFT_410333 (SELMODRAFT_410333) SELMODRAFT_231325 (SELMODRAFT_231325) MADS12-1 (SELMODRAFT_449663) SELMODRAFT_440790 (SELMODRAFT_440790) SELMODRAFT_410336 (SELMODRAFT_410336) SELMODRAFT_25442 (SELMODRAFT_25442) SELMODRAFT_71940 (SELMODRAFT_71940) SELMODRAFT_91633 (SELMODRAFT_91633) SELMODRAFT_170735 (SELMODRAFT_170735) SELMODRAFT_170737 (SELMODRAFT_170737) SELMODRAFT_91982 (SELMODRAFT_91982) SELMODRAFT_91891 (SELMODRAFT_91891) SELMODRAFT_146421 (SELMODRAFT_146421) SELMODRAFT_410344 (SELMODRAFT_410344) SELMODRAFT_91353 (SELMODRAFT_91353) SELMODRAFT_227897 (SELMODRAFT_227897) SELMODRAFT_170754 (SELMODRAFT_170754) SELMODRAFT_231326 (SELMODRAFT_231326) SELMODRAFT_69059 (SELMODRAFT_69059) SELMODRAFT_91586 (SELMODRAFT_91586) SELMODRAFT_231327 (SELMODRAFT_231327) SELMODRAFT_410351 (SELMODRAFT_410351) SELMODRAFT_91404 (SELMODRAFT_91404) SELMODRAFT_231328 (SELMODRAFT_231328) SELMODRAFT_146440 (SELMODRAFT_146440) Click to show this node (Physcomitrella patens subsp. patens) Physcomitrella patens subsp. patens duplication node (click to collapse) Click to show this node (Physcomitrella patens subsp. patens) Physcomitrella patens subsp. patens duplication node (click to collapse) Click to hide this line (Physcomitrella patens subsp. patens) Physcomitrella patens subsp. patens terminal node Physcomitrella patens subsp. patens - Chr:DS544895.1 PP1S6_336V6 PP1S6_337V6 PP1S6_340V6 PP1S6_341V6 A9RFM8_PHYPA (PP1S6_342V6) PP1S6_343V6 A9RFN1_PHYPA (PP1S6_348V6) PP1S6_350V6 PP1S6_349V6 PP1S6_353V6 PP1S6_355V6 A9RFN5_PHYPA (PP1S6_357V6) PP1S6_359V6 PP1S6_360V6 A9RFN6_PHYPA (PP1S6_364V6) PP1S6_367V6 A9RFN8_PHYPA (PP1S6_369V6) A9RFN9_PHYPA (PP1S6_370V6) A9RFP0_PHYPA (PP1S6_371V6) A9RFP1_PHYPA (PP1S6_373V6) A9RFP2_PHYPA (PP1S6_375V6) A9RFP3_PHYPA (PP1S6_376V6) PP1S6_378V6 A9RFP4_PHYPA (PP1S6_379V6) A9RFP5_PHYPA (PP1S6_381V6) PP1S6_384V6 PP1S6_385V6 PP1S6_386V6 PP1S6_387V6 A9RFP7_PHYPA (PP1S6_388V6) Click to hide this line (Physcomitrella patens subsp. patens) Physcomitrella patens subsp. patens terminal node Physcomitrella patens subsp. patens - Chr:DS544895.1 PP1S6_181V6 PP1S6_182V6 A9RFF1_PHYPA (PP1S6_183V6) PP1S6_184V6 PP1S6_185V6 A9RFF2_PHYPA (PP1S6_186V6) PP1S6_188V6 A9RFF3_PHYPA (PP1S6_189V6) A9RFF4_PHYPA (PP1S6_190V6) A9RFF5_PHYPA (PP1S6_191V6) A9RFF7_PHYPA (PP1S6_193V6) A9RFF8_PHYPA (PP1S6_194V6) A9RFF9_PHYPA (PP1S6_195V6) A9RFG0_PHYPA (PP1S6_196V6) A9RQN3_PHYPA (PP1S6_198V6) A9RFG3_PHYPA (PP1S6_202V6) PP1S6_203V6 PP1S6_204V6 PP1S6_208V6 PP1S6_209V6 PP1S6_213V6 PP1S6_212V6 PP1S6_214V6 PP1S6_217V6 PP1S6_218V6 A9RFH4_PHYPA (PP1S6_222V6) PP1S6_224V6 A9RFH5_PHYPA (PP1S6_223V6) PP1S6_227V6 PP1S6_228V6 Click to hide this line (Physcomitrella patens subsp. patens) Physcomitrella patens subsp. patens terminal node Physcomitrella patens subsp. patens - Chr:DS545004.1 PP1S115_19V6 PP1S115_20V6 A9SSZ8_PHYPA (PP1S115_21V6) PP1S115_37V6 PP1S115_36V6 PP1S115_39V6 A9ST14_PHYPA (PP1S115_40V6) PP1S115_41V6 PP1S115_56V6 PP1S115_58V6 PP1S115_59V6 A9ST18_PHYPA (PP1S115_60V6) A9ST19_PHYPA (PP1S115_61V6) A9ST20_PHYPA (PP1S115_63V6) A9ST21_PHYPA (PP1S115_64V6) A9ST23_PHYPA (PP1S115_66V6) PP1S115_68V6 PP1S115_69V6 A9ST26_PHYPA (PP1S115_78V6) PP1S115_79V6 A9ST27_PHYPA (PP1S115_80V6) PP1S115_81V6 A9ST28_PHYPA (PP1S115_82V6) A9ST29_PHYPA (PP1S115_90V6) A9ST30_PHYPA (PP1S115_92V6) PP1S115_94V6 A9ST31_PHYPA (PP1S115_97V6) A9ST32_PHYPA (PP1S115_99V6) A9RB78_PHYPA (PP1S115_101V6) PP1S115_104V6 Click to show this node (Embryophyta) Embryophyta speciation node (click to collapse) Click to hide this line (Physcomitrella patens subsp. patens) Physcomitrella patens subsp. patens terminal node Physcomitrella patens subsp. patens - Chr:DS544949.1 PP1S60_156V6 PP1S60_158V6 PP1S60_159V6 A9SAE7_PHYPA (PP1S60_160V6) A9SAE8_PHYPA (PP1S60_162V6) PP1S60_168V6 A9SAF3_PHYPA (PP1S60_169V6) PP1S60_173V6 PP1S60_174V6 A9SAF6_PHYPA (PP1S60_175V6) PP1S60_176V6 PP1S60_177V6 A9SAF8_PHYPA (PP1S60_179V6) PP1S60_180V6 A9SAF9_PHYPA (PP1S60_178V6) PP1S60_184V6 A9SAG2_PHYPA (PP1S60_185V6) A9SAG3_PHYPA (PP1S60_186V6) A9SAG4_PHYPA (PP1S60_187V6) PP1S60_188V6 PP1S60_189V6 A9SAG6_PHYPA (PP1S60_190V6) A9SAG7_PHYPA (PP1S60_191V6) A9SAG8_PHYPA (PP1S60_192V6) PP1S60_194V6 A9SAH0_PHYPA (PP1S60_199V6) A9SAH1_PHYPA (PP1S60_200V6) PP1S60_201V6 PP1S60_203V6 PP1S60_210V6 Click to hide this line (Chlamydomonas reinhardtii) Chlamydomonas reinhardtii terminal node Chlamydomonas reinhardtii - Chr:DS496121 CHLREDRAFT_145529 (CHLREDRAFT_145529) CHLREDRAFT_206255 (CHLREDRAFT_206255) CHLREDRAFT_145531 (CHLREDRAFT_145531) CHLREDRAFT_145532 (CHLREDRAFT_145532) CHLREDRAFT_145533 (CHLREDRAFT_145533) CHLREDRAFT_189278 (CHLREDRAFT_189278) CHLREDRAFT_156942 (CHLREDRAFT_156942) CHLREDRAFT_189279 (CHLREDRAFT_189279) CHLREDRAFT_189280 (CHLREDRAFT_189280) CLPR2 (CHLREDRAFT_183329) RAD9 (CHLREDRAFT_170734) CHLREDRAFT_189283 (CHLREDRAFT_189283) CHLREDRAFT_115745 (CHLREDRAFT_115745) CHLREDRAFT_189284 (CHLREDRAFT_189284) CHLREDRAFT_183330 (CHLREDRAFT_183330) CHLREDRAFT_156948 (CHLREDRAFT_156948) CHLREDRAFT_189289 (CHLREDRAFT_189289) CHLREDRAFT_183333 (CHLREDRAFT_183333) CHLREDRAFT_115751 (CHLREDRAFT_115751) CHLREDRAFT_128577 (CHLREDRAFT_128577) CHLREDRAFT_100777 (CHLREDRAFT_100777) CHLREDRAFT_189294 (CHLREDRAFT_189294) CHLREDRAFT_189295 (CHLREDRAFT_189295) CGL67 (CHLREDRAFT_145554) GDPD1 (CHLREDRAFT_145556) GDPD2 (CHLREDRAFT_115518) CHLREDRAFT_170753 (CHLREDRAFT_170753) SRRA1 (CHLREDRAFT_195482) CHLREDRAFT_189298 (CHLREDRAFT_189298) CHLREDRAFT_189299 (CHLREDRAFT_189299) Click to hide this line (Opisthokonta) Opisthokonta speciation node (click to collapse) Opisthokonta Click to hide this line (Coelomata) Coelomata speciation node (click to collapse) Coelomata Click to hide this line (Ecdysozoa) Ecdysozoa speciation node (click to collapse) Ecdysozoa Click to hide this line (Drosophila melanogaster) Drosophila melanogaster terminal node Drosophila melanogaster - Chr:3L CG13309 (FBgn0035933) dally (FBgn0263930) CG32026 (FBgn0052026) CG43169 (FBgn0262788) Mcm7 (FBgn0020633) TrpA1 (FBgn0035934) mfr (FBgn0035935) Tsp66E (FBgn0035936) CG43783 (FBgn0264305) orb2 (FBgn0264307) GNBP3 (FBgn0040321) mRpL12 (FBgn0011787) CG13313 (FBgn0035941) CG5660 (FBgn0035942) CG5653 (FBgn0035943) CG5026 (FBgn0035945) pix (FBgn0086706) Srp68 (FBgn0035947) CG5644 (FBgn0035948) CG13314 (FBgn0035949) Galk (FBgn0263199) CG5068 (FBgn0035951) CG5280 (FBgn0035952) smg (FBgn0016070) Doc3 (FBgn0035954) CG5194 (FBgn0035955) Doc2 (FBgn0035956) Doc1 (FBgn0028789) CG5144 (FBgn0035957) Click to hide this line (Caenorhabditis elegans) Caenorhabditis elegans terminal node Caenorhabditis elegans - Chr:IV deb-1 (ZC477.9) ZC477.4 (ZC477.4) ZC477.5 (ZC477.5) ZC477.3 (ZC477.3) ZC477.10 (ZC477.10) ZC477.2 (ZC477.2) ZC477.7 (ZC477.7) ssq-3 (ZC477.1) nas-8 (C34D4.9) C34D4.10 (C34D4.10) str-48 (C34D4.8) grsp-3 (C34D4.11) cyn-12 (C34D4.12) C34D4.13 (C34D4.13) col-113 (C34D4.15) C34D4.3 (C34D4.3) C34D4.2 (C34D4.2) C34D4.1 (C34D4.1) C42D4.18 (C42D4.18) skr-16 (C42D4.6) str-220 (C42D4.9) str-1 (C42D4.5) str-44 (C42D4.4) C42D4.3 (C42D4.3) C42D4.2 (C42D4.2) clec-179 (C42D4.11) C42D4.13 (C42D4.13) C42D4.1 (C42D4.1) Click to hide this line (Chordata) Chordata speciation node (click to collapse) Chordata Click to show this node (Homo sapiens) Homo sapiens duplication node (click to collapse) Click to show this node (Homo sapiens) Homo sapiens duplication node (click to collapse) Click to show this node (Homo sapiens) Homo sapiens duplication node (click to collapse) Click to hide this line (Homo sapiens) Homo sapiens terminal node Homo sapiens - Chr:17 PIRT (ENSG00000233670) SHISA6 (ENSG00000188803) DNAH9 (ENSG00000007174) ZNF18 (ENSG00000154957) MAP2K4 (ENSG00000065559) MYOCD (ENSG00000141052) ARHGAP44 (ENSG00000006740) ELAC2 (ENSG00000006744) HS3ST3A1 (ENSG00000153976) COX10 (ENSG00000006695) CDRT15 (ENSG00000223510) HS3ST3B1 (ENSG00000125430) PMP22 (ENSG00000109099) TEKT3 (ENSG00000125409) CDRT4 (ENSG00000239704) CDRT1 (ENSG00000181464) TRIM16 (ENSG00000251537) CDRT1 (ENSG00000241322) TRIM16 (ENSG00000221926) ZNF286A (ENSG00000255104) ZNF286A (ENSG00000187607) TBC1D26 (ENSG00000214946) ADORA2B (ENSG00000170425) ZSWIM7 (ENSG00000214941) TTC19 (ENSG00000011295) AC002553.1 (ENSG00000227782) NCOR1 (ENSG00000141027) PIGL (ENSG00000108474) CENPV (ENSG00000166582) Click to hide this line (Homo sapiens) Homo sapiens terminal node Homo sapiens - Chr:17 SHISA6 (ENSG00000188803) DNAH9 (ENSG00000007174) ZNF18 (ENSG00000154957) MAP2K4 (ENSG00000065559) MYOCD (ENSG00000141052) ARHGAP44 (ENSG00000006740) ELAC2 (ENSG00000006744) HS3ST3A1 (ENSG00000153976) COX10 (ENSG00000006695) CDRT15 (ENSG00000223510) HS3ST3B1 (ENSG00000125430) PMP22 (ENSG00000109099) TEKT3 (ENSG00000125409) CDRT4 (ENSG00000239704) CDRT1 (ENSG00000181464) TRIM16 (ENSG00000251537) CDRT1 (ENSG00000241322) TRIM16 (ENSG00000221926) ZNF286A (ENSG00000255104) ZNF286A (ENSG00000187607) TBC1D26 (ENSG00000214946) ADORA2B (ENSG00000170425) ZSWIM7 (ENSG00000214941) TTC19 (ENSG00000011295) AC002553.1 (ENSG00000227782) NCOR1 (ENSG00000141027) PIGL (ENSG00000108474) CENPV (ENSG00000166582) Click to hide this line (Homo sapiens) Homo sapiens terminal node Homo sapiens - Chr:17 MYO15A (ENSG00000091536) ALKBH5 (ENSG00000091542) LLGL1 (ENSG00000131899) FLII (ENSG00000177731) SMCR7 (ENSG00000177427) TOP3A (ENSG00000177302) SMCR8 (ENSG00000176994) SHMT1 (ENSG00000176974) EVPLL (ENSG00000214860) LGALS9C (ENSG00000171916) FAM106A (ENSG00000213077) TBC1D28 (ENSG00000189375) ZNF286B (ENSG00000249459) TRIM16L (ENSG00000108448) FBXW10 (ENSG00000171931) PRPSAP2 (ENSG00000141127) SLC5A10 (ENSG00000154025) FAM83G (ENSG00000188522) GRAP (ENSG00000154016) AC007952.5 (ENSG00000228157) GRAPL (ENSG00000189152) AC007952.1 (ENSG00000214844) AC007952.6 (ENSG00000197665) AC106017.1 (ENSG00000230493) EPN2 (ENSG00000072134) B9D1 (ENSG00000108641) MAPK7 (ENSG00000166484) MFAP4 (ENSG00000166482) RNF112 (ENSG00000128482) SLC47A1 (ENSG00000142494) Click to hide this line (Homo sapiens) Homo sapiens terminal node Homo sapiens - Chr:16 RBFOX1 (ENSG00000078328) TMEM114 (ENSG00000232258) METTL22 (ENSG00000067365) ABAT (ENSG00000183044) TMEM186 (ENSG00000184857) PMM2 (ENSG00000140650) CARHSP1 (ENSG00000153048) USP7 (ENSG00000187555) C16orf72 (ENSG00000182831) RP11-297M9.1 (ENSG00000260362) GRIN2A (ENSG00000183454) ATF7IP2 (ENSG00000166669) EMP2 (ENSG00000213853) TEKT5 (ENSG00000153060) NUBP1 (ENSG00000103274) CIITA (ENSG00000179583) DEXI (ENSG00000182108) CLEC16A (ENSG00000038532) SOCS1 (ENSG00000185338) TNP2 (ENSG00000178279) PRM3 (ENSG00000178257) PRM2 (ENSG00000122304) PRM1 (ENSG00000175646) RMI2 (ENSG00000175643) CTD-3088G3.8 (ENSG00000188897) LITAF (ENSG00000189067) SNN (ENSG00000184602) TXNDC11 (ENSG00000153066) ZC3H7A (ENSG00000122299) RSL1D1 (ENSG00000171490) Click to hide this line (Ciona savignyi) Ciona savignyi terminal node Ciona savignyi - Chr:reftig_5 ENSCSAVG00000000494 ENSCSAVG00000000495 ENSCSAVG00000000496 ENSCSAVG00000000497 ENSCSAVG00000000499 ENSCSAVG00000000573 ENSCSAVG00000000579 ENSCSAVG00000000580 ENSCSAVG00000000581 ENSCSAVG00000000583 ENSCSAVG00000000576 ENSCSAVG00000000586 ENSCSAVG00000000588 ENSCSAVG00000000591 ENSCSAVG00000000594 ENSCSAVG00000000600 ENSCSAVG00000000601 ENSCSAVG00000000602 ENSCSAVG00000000604 ENSCSAVG00000000615 ENSCSAVG00000000616 ENSCSAVG00000000617 ENSCSAVG00000000618 ENSCSAVG00000000619 ENSCSAVG00000000620 ENSCSAVG00000000622 ENSCSAVG00000000623 ENSCSAVG00000000626 ENSCSAVG00000000645 ENSCSAVG00000000648 Click to hide this line (Saccharomyces cerevisiae S288c) Saccharomyces cerevisiae S288c terminal node Saccharomyces cerevisiae S288c - Chr:IV FMP16 (YDR070C) PAA1 (YDR071C) IPT1 (YDR072C) SNF11 (YDR073W) TPS2 (YDR074W) PPH3 (YDR075W) RAD55 (YDR076W) SED1 (YDR077W) SHU2 (YDR078C) PET100 (YDR079W) TFB5 (YDR079C-A) VPS41 (YDR080W) PDC2 (YDR081C) STN1 (YDR082W) RRP8 (YDR083W) AFR1 (YDR085C) SSS1 (YDR086C) RRP1 (YDR087C) SLU7 (YDR088C) YDR089W (YDR089W) YDR090C (YDR090C) RLI1 (YDR091C) UBC13 (YDR092W) DNF2 (YDR093W) YDR094W (YDR094W) YDR095C (YDR095C) GIS1 (YDR096W) MSH6 (YDR097C) GRX3 (YDR098C) YDR098C-B (YDR098C-B) Click to hide this line (Cyanidioschyzon merolae strain 10D) Cyanidioschyzon merolae strain 10D terminal node Cyanidioschyzon merolae strain 10D - Chr:Chr18 CMR397C CMR398C CMR399C CMR400C CMR401C CMR402C CMR404C CMR405C CMR406C CMR407C CMR408C CMR409C CMR410C CMR411C CMR412C CMR415C CMR417C CMR418C CMR420C CMR421C CMR423C CMR424C CMR425C CMR427C CMR428C CMR431C CMR432C CMR433C CMR435C CMR438C BRADI2G34827 BRADI2G34910 P0676G05.12 (BGIOSGA018773) ORGLA05G0037700 OB05G13790 SB09G004470 (Sb09g004470) BRADI2G34900 P0676G05.13 (BGIOSGA018772) ORGLA05G0037800 OB05G13800 SB09G004480 (Sb09g004480) Si010210m.g BRADI2G34750 OB05G13920 SB09G004630 (Sb09g004630) Si011782m.g LOC_Os05g06770 ORGLA05G0039200 BRADI2G12325 BRADI2G12405 UBB (ENSG00000170315) BRADI2G34870 BRADI2G34940 BRADI2G34790 MLOC_50975 OSJNBA0034O12.1 (BGIOSGA018769) OsI_18551 (BGIOSGA018768) LOC_Os05g06720 ORGLA05G0038900 OB05G13870 SB09G004580 (Sb09g004580) Si010162m.g BRADI2G34670 BRADI2G34820 OsI_18547 (BGIOSGA019224) LOC_Os05g06690 ORGLA05G0038500 OB05G13840 SB09G004530 (Sb09g004530) Si009242m.g CG5087 (FBgn0035953) hecd-1 (C34D4.14) BRADI2G34877 rpc-1 (C42D4.8) BRADI2G34710 ORGLA05G0040200 SB09G004670 (Sb09g004670) Si009561m.g BRADI2G34687 Bra018581 (Bra018581) BRADI2G34780 BRADI2G34800 MLOC_50974 OSJNBA0017J22.8 (BGIOSGA018770) LOC_Os05g06710 ORGLA05G0038800 OB05G13860 SB09G004550 (Sb09g004550) GRMZM2G048200 Si010176m.g GLYMA19G41470 GLYMA03G38890 Bra020025 (Bra020025) AT1G09390 (AT1G09390) XM_002889701.1 (fgenesh1_pg.C_scaffold_1000783) VIT_14s0060g00680 POPTRDRAFT_1072654 (POPTR_0002s19180) VIT_07s0005g02030 VIT_07s0005g02040 VIT_07s0005g02050 OsI_01703 (BGIOSGA003410) BGIOSGA003411 OS01G0331100 (BGIOSGA003415) LOC_Os01g22780 ORGLA01G0116100 ORGLA01G0116300 ORGLA01G0116800 OB01G23590 OB01G23600 OB01G23630 BRADI2G12330 BRADI2G12340 BRADI2G12370 SB03G013350 (Sb03g013350) SB03G013370 (Sb03g013370) SB03G013400 (Sb03g013400) GRMZM2G117030 GRMZM2G074517 GRMZM2G360624 GRMZM2G174975 Si001462m.g Si001792m.g Si001798m.g BRADI2G34666 BRADI2G34930 P0676G05.9 (BGIOSGA018774) ORGLA05G0037500 OB05G13760 SB09G004450 (Sb09g004450) Si009426m.g BRADI2G12540 SB03G013530 (Sb03g013530) Si000395m.g BRADI2G34860 BRADI2G34680 GRMZM2G172609 GRMZM2G029027 BRADI2G34730 BRADI2G34717 ORGLA05G0040100 SB09G004650 (Sb09g004650) SB09G004660 (Sb09g004660) Si010422m.g Si010431m.g Si010419m.g BRADI2G34770 P0554D10.2 (BGIOSGA019228) LOC_Os05g06750 ORGLA05G0039000 SB09G004610 (Sb09g004610) Si009915m.g P0676G05.7 (BGIOSGA018775) ORGLA05G0037200 OB01G23500 BRADI2G12310 BRADI2G12520 Sb03g013540 GRMZM2G462140 Si001653m.g BRADI2G34950 OB05G13730 BRADI2G34837 GA2OX1 (BGIOSGA019223) ga2ox-1 (LOC_Os05g06670) ORGLA05G0038400 OB05G13830 SB09G004520 (Sb09g004520) Si012158m.g Si012495m.g POPTR_0002s19260 GA2OX7 (POPTR_0014s11250) POPTR_0014s11260 VIT_07s0005g01920 OS01G0332200 (BGIOSGA001742) OsI_01717 (BGIOSGA001741) LOC_Os01g22910 ga2ox 2 (LOC_Os01g22920) OB01G23660 BRADI2G12440 SB03G013450 (Sb03g013450) GRMZM2G176963 Si004358m.g EPlGT00140000002780 EPlGT00140000002780 EPlGT00140000002780.c EPlGT00140000002780.c EPlGT00140000002780.c EPlGT00140000002780.c EPlGT00140000002780.c.f EPlGT00140000002780.c.f EPlGT00140000002780.c.f BRADI2G34810 MLOC_50973 EPlGT00140000002780.c.f EPlGT00140000002780.c.f OSJNBA0017J22.7 (BGIOSGA019225) LOC_Os05g06700 ORGLA05G0038700 OB05G13850 EPlGT00140000002780.c.f EPlGT00140000002780.c.f SB09G004540 (Sb09g004540) GRMZM2G048117 Si011145m.g GSMUA_Achr1G24970_001 (GSMUA_Achr1G24970_001) GSMUA_Achr2G07050_001 (GSMUA_Achr2G07050_001) GSMUA_Achr8G29900_001 (GSMUA_Achr8G29900_001) EPlGT00140000002780.c.g EPlGT00140000002780.c.g EPlGT00140000002780.c.g GLYMA19G41530 GLYMA03G38941 GLYMA10G28620 GLYMA20G22720 POPTRDRAFT_744441 (POPTR_0005s01380) POPTRDRAFT_570691 (POPTR_0013s00770) EPlGT00140000002780.c.g Bra030769 (Bra030769) Bra018566 (Bra018566) EPlGT00140000002780.c.g AT1G09330 (AT1G09330) XM_002892454.1 (fgenesh2_kg.1__978__AT1G09330.1) VIT_14s0060g00830 EPlGT00140000002780.c.g Solyc06g073270.2 PGSC0003DMG400026912 (PGSC0003DMG400026912) EPlGT00140000002780.c.h POPTR_0002s19240 POPTRDRAFT_572573 (POPTR_0014s11220) VIT_07s0005g01960 SELMODRAFT_171649 (SELMODRAFT_171649) SELMODRAFT_146417 (SELMODRAFT_146417) A9RFN7_PHYPA (PP1S6_365V6) PP1S6_199V6 A9ST22_PHYPA (PP1S115_65V6) CHLREDRAFT_145545 (CHLREDRAFT_145545) EPlGT00140000002780 EPlGT00140000002780 EPlGT00140000002780 CG5021 (FBgn0035944) C34D4.4 (C34D4.4) EPlGT00140000002780 FAM18B2-CDRT4 (ENSG00000259024) FAM18B2 (ENSG00000175106) FAM18B2-CDRT4 (ENSG00000259024) FAM18B2 (ENSG00000175106) FAM18B1 (ENSG00000171928) FAM18A (ENSG00000166676) ENSCSAVG00000000599 TVP23 (YDR084C) CMR413C EPlGT00140000002780.c.e EPlGT00140000002780.c.e EPlGT00140000002780.c.e EPlGT00140000002780.c.e P0489E06.36 (BGIOSGA003417) LOC_Os01g22870 ORGLA01G0116900 OB01G23640 BRADI2G12420 EPlGT00140000002780.c.e EPlGT00140000002780.c.e SB03G013410 (Sb03g013410) GRMZM5G800558 Si003052m.g A9SAG0_PHYPA (PP1S60_183V6) BRADI2G34700 SB09G004680 (Sb09g004680) BRADI2G34890 OsI_18540 (BGIOSGA019218) ORGLA05G0037900 OB05G13810 SB09G004490 (Sb09g004490) Si012497m.g BRADI2G12490 Si003350m.g BRADI2G34960 OS05G0156600 (BGIOSGA018776) OB05G13720 BRADI2G34920 P0676G05.11 (BGIOSGA019217) ORGLA05G0037600 OB05G13780 SB09G004460 (Sb09g004460) BRADI2G34760 OSJNBA0034O12.5 (BGIOSGA019229) LOC_Os05g06760 ORGLA05G0039100 OB05G13900 SB09G004620 (Sb09g004620) Si010252m.g BRADI2G34850 OSJNBA0017J22.3 (BGIOSGA018771) LOC_Os05g06660 ORGLA05G0038300 OB05G13820 SB09G004510 (Sb09g004510) Si010037m.g B1140D12.5 (BGIOSGA003419) B1140D12.11 (BGIOSGA001740) LOC_Os01g22954 LOC_Os01g22980 ORGLA01G0117100 ORGLA01G0117200 OB01G23670 OB01G23680 BRADI2G12450 BRADI2G12460 SB03G013460 (Sb03g013460) SB03G013470 (Sb03g013470) SB03G013480 (Sb03g013480) GRMZM2G123815 Si001243m.g Si001286m.g Si001262m.g BRADI2G34740 ORGLA05G0039700 SB09G004640 (Sb09g004640) Si009709m.g ORGLA05G0039900 ORGLA05G0040000