Reference Gene Name: PHYA (AT1G09570) Ensembl
Reference Species : Arabidopsis thaliana
Root Species : Magnoliophyta (~10 million years) 		Magnoliophyta Link Wikipedia to Arabidopsis thaliana Link Ensembl
×2 ÷2 Center the view on the reference gene Shift 1 gene on the left Shift 5 genes on the left Shift 1 gene on the right Shift 5 genes on the right Zoom out Show 1 less gene on each side Show 1 more gene on each side Show half the number of genes on each side Show twice more genes on each side Zoom in
Schematic scale
Genomic scale
dN/dS Ratio
Protein Similarity
CNE Track

A more recent version of genomicus is available here

 
Magnoliophyta duplication node (click to collapse) Magnoliophyta (~10 My ago) Click to hide this line (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Magnoliophyta (~10 My ago) - block_1003 TreeBeST000876.A Click to hide this line (Mesangiospermae) Mesangiospermae speciation node (click to collapse) Mesangiospermae (~10 My ago) - block_1791 TreeBeST000876.A Click to hide this line (Pentapetalae) Pentapetalae speciation node (click to collapse) Pentapetalae (~10 My ago) - block_14 TreeBeST005718.B TreeBeST009453.B.b.b.a.b TreeBeST002065.A.g TreeBeST000095.B.a.b.b.b.b TreeBeST009775 TreeBeST000341.A.b.b.b.a.a TreeBeST010398 TreeBeST003097.b.b.b.a.b.b.a.a.a TreeBeST000052.E.a.b.b TreeBeST010840.B TreeBeST007894.P TreeBeST003032.C TreeBeST009822.B TreeBeST006315 TreeBeST006926 TreeBeST005761 TreeBeST000177.B.d TreeBeST008297.D.b.f TreeBeST005762 TreeBeST008124.B.c.b.b.a.a.b.a TreeBeST011093.f.b.a.b.a.a.d.b.a TreeBeST000902.A.b.b.b.a.b Click to hide this line (rosids) rosids speciation node (click to collapse) rosids (~10 My ago) - block_29 TreeBeST003032.C TreeBeST008297.D.b.f TreeBeST000177.B.d TreeBeST005761 TreeBeST006926 TreeBeST006315 TreeBeST000876.A TreeBeST009822.B TreeBeST010840.B TreeBeST000052.E.a.b.b.f.a TreeBeST010398 TreeBeST000341.A.b.b.b.a.a TreeBeST000358.C.b.a.b.a.a.a.a TreeBeST009775 TreeBeST000095.B.a.b.b.b.b TreeBeST005050 TreeBeST002065.A.g.c.a TreeBeST006944 Click to hide this line (Eurosids) Eurosids speciation node (click to collapse) Eurosids (~10 My ago) - block_1 TreeBeST007974.A.f.b.a TreeBeST008363.C.a.a.b.b.b TreeBeST003032.C TreeBeST008297.D.b.f TreeBeST000177.B.d TreeBeST005761 TreeBeST006673 TreeBeST006926 TreeBeST006315 TreeBeST000876.A TreeBeST003097.a.e.b TreeBeST009822.B TreeBeST010840.B TreeBeST000052.E.a.b.b.f.b.a.a EPlGT00730000052719 TreeBeST000341.A.b.b.b.a.a TreeBeST000358.C.b.a.b.a.a.a.a TreeBeST009775 TreeBeST000095.B.a.b.b.b.b Click to hide this line (Malvidae) Malvidae speciation node (click to collapse) Malvidae (~10 My ago) - block_13 TreeBeST008297.D.b.f TreeBeST000177.B.d TreeBeST005761 TreeBeST006673 TreeBeST006462.A TreeBeST006315 TreeBeST009822.B TreeBeST010840.B TreeBeST000052.E.a.b.b.f.a TreeBeST003097.b.b.b.a.b.b.a.a.b TreeBeST000052.E.a.b.b.f.b.a.a TreeBeST007744.F.b.a TreeBeST000358.C.b.a.b.a.a.a.a TreeBeST009775 TreeBeST000095.B.a.b.b.b.b TreeBeST005050 Click to hide this line (Malvids) Malvids speciation node (click to collapse) Malvids (~10 My ago) - block_10 TreeBeST005718.B.a TreeBeST009453.B.b.b.a.b TreeBeST002065.A.g.c.a TreeBeST009775 TreeBeST004268.B TreeBeST000052.E.a.b.b.f.b.a.a TreeBeST010840.B TreeBeST009822.B TreeBeST006315 TreeBeST006462.A TreeBeST006673 TreeBeST005761 TreeBeST000177.B.d TreeBeST008297.D.b.f TreeBeST008340.B TreeBeST007887.D.b.b.a.a TreeBeST004252 Click to hide this line (Brassicales) Brassicales speciation node (click to collapse) Brassicales (~10 My ago) - block_266 TreeBeST002065.A.g.c.a TreeBeST009775 TreeBeST004268.B TreeBeST010840.B TreeBeST009822.B TreeBeST006315 Click to hide this line (pre alpha) pre alpha speciation node (click to collapse) pre alpha (~10 My ago) - block_25 TreeBeST009110.A TreeBeST007341.C.a.b.a.b TreeBeST005899.B.a TreeBeST010705.C TreeBeST007764.Q.a TreeBeST007033 TreeBeST000387.B.a.f.b TreeBeST003097.b.b.b.a.b.a.a TreeBeST003097.a.f TreeBeST002436.B.c.b TreeBeST007741.C.d.c Click to hide this line (Brassicaceae) Brassicaceae speciation node (click to collapse) Brassicaceae (~10 My ago) - block_4 TreeBeST007033 TreeBeST000387.B.a.f.b TreeBeST000313.A.b.b TreeBeST004147.k Click to hide this line (Camelineae) Camelineae speciation node (click to collapse) Camelineae (~10 My ago) - block_2 TreeBeST007033 TreeBeST000387.B.a.f.b Click to hide this line (Arabidopsis) Arabidopsis speciation node (click to collapse) Arabidopsis (~10 My ago) - block_2 Click to hide this line (Arabidopsis thaliana) Arabidopsis thaliana terminal node Arabidopsis thaliana - Chr:1 Click to hide this line (Arabidopsis lyrata subsp lyrata) Arabidopsis lyrata subsp lyrata terminal node Arabidopsis lyrata subsp lyrata - Chr:1 G6PD4 (fgenesh2_kg.1__988__AT1G09420.1) HYL1 (fgenesh2_kg.1__1025__AT1G09700.1) Click to hide this line (Capsella rubella) Capsella rubella terminal node Capsella rubella - scaffold_1 Carubv10010860m.g Carubv10011205m.g Carubv10011324m.g Carubv10009604m.g Carubv10010985m.g Click to hide this line (Arabis alpina) Arabis alpina terminal node Arabis alpina - Chr:Aa.chr1 Aa_G73550.t1 Aa_G73510.t1 Aa_G73500.t1 Aa_G516430.t1 Aa_G516480.t1 Aa_G161000.t1 Aa_G160950.t1 Aa_G160940.t1 Aa_G160930.t1 Aa_G160920.t1 Click to show this node (Brassica) Brassica duplication node (click to collapse) Click to show this node (Brassica) Brassica duplication node (click to collapse) Click to hide this line (Brassica) Brassica speciation node (click to collapse) Brassica (~10 My ago) - block_1088 Click to hide this line (Brassica oleracea var oleracea) Brassica oleracea var oleracea terminal node Brassica oleracea var oleracea - Chr:C5 Bo5g009850 Bo5g009870 Bo5g009930 Bo5g009950 Bo5g009970 Bo5g010110 Bo5g010120 Bo5g010130 Bo5g010140 Click to hide this line (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A06 Bra020028 Bra020027 Bra020026 Bra020025 Bra020012 Bra019999 Bra019998 Click to hide this line (Brassica) Brassica speciation node (click to collapse) Brassica (~10 My ago) - block_2 TreeBeST007033 TreeBeST000387.B.a.f.b TreeBeST001657.W TreeBeST000313.A.b.b.b TreeBeST000313.A.b.b.a.a TreeBeST004147.k Click to hide this line (Brassica oleracea var oleracea) Brassica oleracea var oleracea terminal node Brassica oleracea var oleracea - Chr:C8 Bo8g110910 Bo8g110920 Bo8g110930 Bo8g110950 Bo8g110960 ATARLA1B (Bo8g110970) Bo8g110980 Bo8g111000 Bo8g111040 Bo8g111080 Bo8g111100 Bo8g111110 Bo8g111130 Bo8g111150 Bo8g111160 Bo8g111170 Bo8g111180 BIP3 (Bo8g112180) Bo8g112190 Bo8g112200 Click to hide this line (Brassica rapa subsp pekinensis) Brassica rapa subsp pekinensis terminal node Brassica rapa subsp pekinensis - Chr:A09 Bra031687 Bra031686 Bra031685 Bra031684 Bra031683 Bra031681 ATARLA1B (Bra031680) Bra031679 Bra031678 Bra031677 Bra031670 Bra031664 AtGolS3 (Bra031663) Bra031662 Bra031661 Bra031660 Bra031659 ATRBOHB (Bra031658) BIP3 (Bra031657) Click to show this node (Brassica) Brassica speciation node (click to collapse) Click to hide this line (Eutremeae) Eutremeae speciation node (click to collapse) Eutremeae (~10 My ago) - block_1 TreeBeST000202.A.b.b.b.b.a.a.b.a.a TreeBeST011078.B.a.a.b.b.a TreeBeST004147.k TreeBeST000313.A.b.b.b TreeBeST003097.b.b.b.a.b.a.b TreeBeST000387.B.a.f.b TreeBeST007033 Click to hide this line (Thellungiella parvula) Thellungiella parvula terminal node Thellungiella parvula - Chr:ch1 Tp1g08020 Tp1g08030 Tp1g08150 Tp1g08290 Tp1g08300 Tp1g08310 Tp1g08320 Click to hide this line (Thellungiella halophila) Thellungiella halophila terminal node Thellungiella halophila - scaffold_5 Thhalv10009464m.g Thhalv10009442m.g Thhalv10009254m.g Thhalv10007777m.g Thhalv10007053m.g Thhalv10009352m.g Thhalv10007968m.g Click to show this node (Tarenaya hassleriana) Tarenaya hassleriana duplication node (click to collapse) Click to hide this line (Tarenaya hassleriana) Tarenaya hassleriana terminal node Tarenaya hassleriana - Chr:Cleome26 Th12014 Th12015 Th12021 Th12025 Th12030 Th12031 Th12032 Th12034 Th12041 Th12042 Th12043 Th12044 Click to hide this line (Tarenaya hassleriana) Tarenaya hassleriana terminal node Tarenaya hassleriana - Chr:Cleome1 Th26075 Th26076 Th26077 Th26078 Th26079 Th26080 Th26081 Th26082 Th26084 Th26086 Th26091 Th26092 Th26095 Th00014 Th26096 Th26097 Th26100 Th26101 Th26102 Th26103 Th26104 Click to hide this line (Carica papaya) Carica papaya terminal node Carica papaya - Chr:supercontig_48 evm.TU.supercontig_48.216 evm.TU.supercontig_48.221 evm.TU.supercontig_48.222 evm.TU.supercontig_48.223 evm.TU.supercontig_48.224 evm.TU.supercontig_48.225 evm.TU.supercontig_48.226 evm.TU.supercontig_48.227 evm.TU.supercontig_48.228 evm.TU.supercontig_48.229 evm.TU.supercontig_48.232 evm.TU.supercontig_48.233 evm.TU.supercontig_48.234 evm.TU.supercontig_48.235 evm.TU.supercontig_48.236 Click to show this node (Malvaceae) Malvaceae duplication node (click to collapse) Click to show this node (Malvaceae) Malvaceae speciation node (click to collapse) Click to hide this line (Gossypium raimondii) Gossypium raimondii terminal node Gossypium raimondii - Chr:Chr13 Gorai.013G202400|Gorai.013G202400.1 Gorai.013G202500|Gorai.013G202500.1 Gorai.013G202700|Gorai.013G202700.1 Gorai.013G202800|Gorai.013G202800.1 Gorai.013G202900|Gorai.013G202900.1 Gorai.013G203000|Gorai.013G203000.1 Gorai.013G203100|Gorai.013G203100.1 Gorai.013G203200|Gorai.013G203200.1 Gorai.013G203300|Gorai.013G203300.1 Gorai.013G203400|Gorai.013G203400.1 Gorai.013G203500|Gorai.013G203500.1 Gorai.013G203600|Gorai.013G203600.1 Gorai.013G203700|Gorai.013G203700.1 Gorai.013G203800|Gorai.013G203800.1 Gorai.013G204000|Gorai.013G204000.1 Gorai.013G204100|Gorai.013G204100.1 Gorai.013G204200|Gorai.013G204200.1 Gorai.013G204300|Gorai.013G204300.1 Gorai.013G204400|Gorai.013G204400.1 Gorai.013G204500|Gorai.013G204500.1 Gorai.013G204600|Gorai.013G204600.1 Gorai.013G204700|Gorai.013G204700.1 Gorai.013G204800|Gorai.013G204800.1 Gorai.013G204900|Gorai.013G204900.1 Gorai.013G205000|Gorai.013G205000.1 Gorai.013G205100|Gorai.013G205100.1 Gorai.013G205200|Gorai.013G205200.1 Gorai.013G205300|Gorai.013G205300.1 Gorai.013G205400|Gorai.013G205400.1 Click to hide this line (Malvaceae) Malvaceae speciation node (click to collapse) Malvaceae (~10 My ago) - block_16 TreeBeST008010.L.c.b.b.b.a.b.b TreeBeST007322.G.a.a.b.j.a.a TreeBeST008297.D.b.f TreeBeST000177.B.d TreeBeST005761 TreeBeST006462.A TreeBeST006315 TreeBeST000876.A TreeBeST003097.a.e.b TreeBeST010840.B.j TreeBeST000052.E.a.b.b.f.b.a.a TreeBeST007744.F.b.a TreeBeST000341.A.b.a.a.b.a.b TreeBeST000358.C.b.a.b.a.a.a.a TreeBeST009775 TreeBeST000095.B.a.b.b.b.b TreeBeST002065.A.g.c.a TreeBeST009453.B.b.b.a.b.h Click to hide this line (Gossypium raimondii) Gossypium raimondii terminal node Gossypium raimondii - Chr:Chr07 Gorai.007G291300|Gorai.007G291300.1 Gorai.007G291400|Gorai.007G291400.1 Gorai.007G291500|Gorai.007G291500.1 Gorai.007G291600|Gorai.007G291600.1 Gorai.007G291700|Gorai.007G291700.1 Gorai.007G291800|Gorai.007G291800.1 Gorai.007G291900|Gorai.007G291900.1 Gorai.007G292000|Gorai.007G292000.1 Gorai.007G292100|Gorai.007G292100.1 Gorai.007G292200|Gorai.007G292200.1 Gorai.007G292300|Gorai.007G292300.1 Gorai.007G292400|Gorai.007G292400.1 Gorai.007G292500|Gorai.007G292500.1 Gorai.007G292600|Gorai.007G292600.1 Gorai.007G292700|Gorai.007G292700.1 Gorai.007G292900|Gorai.007G292900.1 Gorai.007G293000|Gorai.007G293000.1 Gorai.007G293100|Gorai.007G293100.1 Gorai.007G293200|Gorai.007G293200.1 Gorai.007G293300|Gorai.007G293300.1 Gorai.007G293400|Gorai.007G293400.1 Gorai.007G293500|Gorai.007G293500.1 Gorai.007G293600|Gorai.007G293600.1 Gorai.007G293700|Gorai.007G293700.1 Gorai.007G293800|Gorai.007G293800.1 Gorai.007G293900|Gorai.007G293900.1 Gorai.007G294000|Gorai.007G294000.1 Gorai.007G294100|Gorai.007G294100.1 Gorai.007G294200|Gorai.007G294200.1 Gorai.007G294300|Gorai.007G294300.1 Click to hide this line (Theobroma cacao) Theobroma cacao terminal node Theobroma cacao - Chr:5 TCM_026843 TCM_026845 TCM_026847 TCM_026848 TCM_026849 TCM_026850 TCM_026852 TCM_026855 TCM_026856 TCM_026859 TCM_047055 TCM_026863 TCM_026865 TCM_026869 TCM_026870 TCM_026871 TCM_026872 TCM_026873 Click to hide this line (Citrus clementina) Citrus clementina terminal node Citrus clementina - scaffold_8 Ciclev10028470m.g|Ciclev10028470m Ciclev10030405m.g|Ciclev10030405m Ciclev10030167m.g|Ciclev10030167m Ciclev10030003m.g|Ciclev10030003m Ciclev10030129m.g|Ciclev10030129m Ciclev10030128m.g|Ciclev10030128m Ciclev10029320m.g|Ciclev10029320m Ciclev10028809m.g|Ciclev10028809m Ciclev10027858m.g|Ciclev10027858m Ciclev10029843m.g|Ciclev10029843m Ciclev10028530m.g|Ciclev10028530m Ciclev10030031m.g|Ciclev10030031m Ciclev10030055m.g|Ciclev10030055m Ciclev10029949m.g|Ciclev10029949m Ciclev10029557m.g|Ciclev10029557m Ciclev10028864m.g|Ciclev10028864m Ciclev10028175m.g|Ciclev10028175m Ciclev10030069m.g|Ciclev10030069m Ciclev10028527m.g|Ciclev10028527m Ciclev10028084m.g|Ciclev10028084m Ciclev10030352m.g|Ciclev10030352m Ciclev10029865m.g|Ciclev10029865m Ciclev10028674m.g|Ciclev10028674m Ciclev10029774m.g|Ciclev10029774m Ciclev10029724m.g|Ciclev10029724m Ciclev10029890m.g|Ciclev10029890m Ciclev10028504m.g|Ciclev10028504m Click to hide this line (fabids) fabids speciation node (click to collapse) fabids (~10 My ago) - block_14 TreeBeST005050 TreeBeST000095.B.a.b.b.b.b TreeBeST009775 TreeBeST004268.B TreeBeST007744.F.b.a EPlGT00730000052719 TreeBeST003097.b.b.b.a.b.b.a.a.a TreeBeST000052.E.a.b.b.f.b.a.b TreeBeST010840.B TreeBeST007894.P TreeBeST003097.a.e.b TreeBeST000876.A TreeBeST006315 TreeBeST006926 TreeBeST006673 TreeBeST005761 TreeBeST000177.B.d TreeBeST008297.D.b.f TreeBeST003032.C Click to hide this line (Populus trichocarpa) Populus trichocarpa terminal node Populus trichocarpa - Chr:13 POPTRDRAFT_662504 (POPTR_0013s00200) POPTRDRAFT_570638 (POPTR_0013s00210) POPTRDRAFT_240151 (POPTR_0013s00230) POPTRDRAFT_823553 (POPTR_0013s00250) POPTR_0013s00260 POPTR_0013s00270 POPTRDRAFT_570648 (POPTR_0013s00300) XM_002319416.1 (POPTR_0013s00320) POPTR_0013s00330 POPTRDRAFT_570651 (POPTR_0013s00340) POPTRDRAFT_240188 (POPTR_0013s00350) POPTRDRAFT_570653 (POPTR_0013s00360) POPTRDRAFT_570654 (POPTR_0013s00370) Click to hide this line (Leguminosae) Leguminosae speciation node (click to collapse) Leguminosae (~10 My ago) - block_14 TreeBeST004263 TreeBeST007796.C.a.b.a.a.a.a.a.b.b TreeBeST003032.C TreeBeST008297.D.b.f TreeBeST000177.B.d TreeBeST005761 TreeBeST006673 TreeBeST006926 TreeBeST006315 TreeBeST000876.A TreeBeST007894.P TreeBeST010840.B TreeBeST000052.E.a.b.b.f.b.a.a TreeBeST010398 TreeBeST004268.B TreeBeST009775 TreeBeST000095.B.a.b.b.b.b TreeBeST005050 TreeBeST002065.A.g.c.a TreeBeST002065.A.g.c.b TreeBeST009453.B.b.b.a.b TreeBeST005718.B.a Click to show this node (Papilionoideae) Papilionoideae duplication node (click to collapse) Click to show this node (Papilionoideae) Papilionoideae speciation node (click to collapse) Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:3 GLYMA03G38460 GLYMA03G38480 GLYMA03G38490 GLYMA03G38500 GLYMA03G38510 GLYMA03G38520 GLYMA03G38530 GLYMA03G38540 GLYMA03G38550 GLYMA03G38560 GLYMA03G38570 GLYMA03G38581 GLYMA03G38591 GLYMA03G38600 GLYMA03G38610 GLYMA03G38640 GLYMA03G38690 GLYMA03G38701 GLYMA03G38711 GLYMA03G38720 GLYMA03G38730 GLYMA03G38740 GLYMA03G38750 GLYMA03G38760 Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:19 GLYMA19G41060 GLYMA19G41080 GLYMA19G41090 GLYMA19G41100 GLYMA19G41111 GLYMA19G41120 GLYMA19G41130 GLYMA19G41141 GLYMA19G41150 GLYMA19G41160 GLYMA19G41171 GLYMA19G41181 GLYMA19G41190 GLYMA19G41200 GLYMA19G41230 GLYMA19G41270 GLYMA19G41275 GLYMA19G41280 GLYMA19G41287 GLYMA19G41294 GLYMA19G41302 GLYMA19G41310 GLYMA19G41320 GLYMA19G41330 GLYMA19G41350 Click to hide this line (Papilionoideae) Papilionoideae speciation node (click to collapse) Papilionoideae (~10 My ago) - block_160 TreeBeST003562.A.c.d.b.b.a.b TreeBeST003032.C TreeBeST008297.D.b.f.r TreeBeST000177.B.d.n TreeBeST005761.b TreeBeST006926 TreeBeST000876.A TreeBeST010840.B TreeBeST000052.E.a.b.b.f.b.a.b.b EPlGT00730000052719 TreeBeST006390.B TreeBeST006390.A.d TreeBeST000095.B.a.b.b.b.b.f TreeBeST005050 TreeBeST002065.A.g.c.a.c TreeBeST009453.B.b.b.a.b Click to show this node (Glycine max) Glycine max duplication node (click to collapse) Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:10 GLYMA10G28030 GLYMA10G28035 GLYMA10G28040 GLYMA10G28051 GLYMA10G28060 GLYMA10G28070 GLYMA10G28075 GLYMA10G28080 GLYMA10G28091 GLYMA10G28100 GLYMA10G28110 GLYMA10G28130 GLYMA10G28140 GLYMA10G28150 GLYMA10G28180 GLYMA10G28200 GLYMA10G28211 GLYMA10G28220 GLYMA10G28240 GLYMA10G28265 GLYMA10G28260 GLYMA10G28270 GLYMA10G28300 GLYMA10G28310 GLYMA10G28320 Click to hide this line (Glycine max) Glycine max terminal node Glycine max - Chr:20 GLYMA20G21970 GLYMA20G21983 GLYMA20G21996 GLYMA20G22010 GLYMA20G22020 GLYMA20G22030 GLYMA20G22040 GLYMA20G22050 GLYMA20G22070 GLYMA20G22090 GLYMA20G22110 GLYMA20G22120 GLYMA20G22130 GLYMA20G22140 GLYMA20G22150 GLYMA20G22170 GLYMA20G22190 GLYMA20G22200 GLYMA20G22240 GLYMA20G22255 GLYMA20G22270 GLYMA20G22311 APC11 (GLYMA20G22331) GLYMA20G22351 GLYMA20G22370 GLYMA20G22380 Click to hide this line (Lotus japonicus) Lotus japonicus terminal node Lotus japonicus - Chr:chr5.CM0048 chr5.CM0048.40.r2.d chr5.CM0048.50.r2.d chr5.CM0048.70.r2.d chr5.CM0048.90.r2.d chr5.CM0048.100.r2.d chr5.CM0048.110.r2.d chr5.CM0048.140.r2.m chr5.CM0048.160.r2.m chr5.CM0048.170.r2.m chr5.CM0048.180.r2.m chr5.CM0048.190.r2.m chr5.CM0048.240.r2.m chr5.CM0048.250.r2.m chr5.CM0048.260.r2.m chr5.CM0048.280.r2.m chr5.CM0048.330.r2.d chr5.CM0048.340.r2.d chr5.CM0048.350.r2.d chr5.CM0048.360.r2.d chr5.CM0048.380.r2.d chr5.CM0048.390.r2.d chr5.CM0048.400.r2.d chr5.CM0048.410.r2.d chr5.CM0048.430.r2.d Click to hide this line (Medicago truncatula) Medicago truncatula terminal node Medicago truncatula - Chr:1 MTR_1g085010 MTR_1g085020 MTR_1g085030 MTR_1g085050 MTR_1g085060 MTR_1g085080 MTR_1g085090 MTR_1g085100 MTR_1g085110 MTR_1g085120 MTR_1g085130 MTR_1g085150 MTR_1g085170 MTR_1g085180 MTR_1g085190 MTR_1g085210 MTR_1g085220 MTR_1g085230 MTR_1g085240 MTR_1g085250 MTR_1g085260 MTR_1g085270 MTR_1g085280 MTR_1g085300 MTR_1g085310 MTR_1g085320 MTR_1g085350 Click to hide this line (Rosaceae) Rosaceae speciation node (click to collapse) Rosaceae (~10 My ago) - block_15 TreeBeST001126.A.f.g TreeBeST001120.f.b TreeBeST000384.L.d.a.b.a TreeBeST003032.C TreeBeST008297.D.b.f TreeBeST000177.B.d TreeBeST005761 TreeBeST006673 TreeBeST006926 TreeBeST006315 TreeBeST000876.A TreeBeST007894.P TreeBeST010840.B TreeBeST000052.E.a.b.b.f.b.a.a TreeBeST004268.B TreeBeST009775 TreeBeST000095.B.a.b.b.b.b TreeBeST005050 TreeBeST002065.A.g.c.a TreeBeST002065.A.g.c.b TreeBeST009453.B.b.b.a.b TreeBeST005718.B.a Click to hide this line (Prunus persica) Prunus persica terminal node Prunus persica - scaffold_6 PRUPE_ppa007447mg SCR (PRUPE_ppa001546mg) GAUT7 (PRUPE_ppa002860mg) PRUPE_ppa000924mg PRUPE_ppa000992mg PRUPE_ppa018586mg PRUPE_ppa000921mg PRUPE_ppa025198mg PRUPE_ppa008917mg emb1138 (PRUPE_ppa001778mg) PRUPE_ppa006241mg PRUPE_ppa025329mg PRUPE_ppa021623mg PRUPE_ppa021432mg PRUPE_ppa012278mg PRUPE_ppa001925mg PRUPE_ppa017094mg FEN1 (PRUPE_ppa007475mg) PRUPE_ppa018162mg PRUPE_ppa013857mg RCI2B (PRUPE_ppa014548mg) PRUPE_ppa021267mg PRUPE_ppa022799mg PRUPE_ppa019749mg PRUPE_ppa020330mg Click to hide this line (Fragaria vesca) Fragaria vesca terminal node Fragaria vesca - Chr:LG6 mrna00293.1-v1.0-hybrid mrna00294.1-v1.0-hybrid mrna00295.1-v1.0-hybrid mrna00296.1-v1.0-hybrid mrna00297.1-v1.0-hybrid mrna00298.1-v1.0-hybrid mrna00299.1-v1.0-hybrid mrna00253.1-v1.0-hybrid mrna22941.1-v1.0-hybrid mrna22942.1-v1.0-hybrid mrna22943.1-v1.0-hybrid mrna22944.1-v1.0-hybrid mrna22945.1-v1.0-hybrid mrna22946.1-v1.0-hybrid mrna22947.1-v1.0-hybrid mrna22952.1-v1.0-hybrid mrna22953.1-v1.0-hybrid mrna22954.1-v1.0-hybrid mrna33989.1-v1.0-hybrid mrna22955.1-v1.0-hybrid mrna22956.1-v1.0-hybrid mrna22957.1-v1.0-hybrid mrna22958.1-v1.0-hybrid mrna22959.1-v1.0-hybrid mrna22960.1-v1.0-hybrid mrna33990.1-v1.0-hybrid Click to hide this line (Vitis vinifera) Vitis vinifera terminal node Vitis vinifera - Chr:14 VIT_14s0060g00010 VIT_14s0060g00040 VIT_14s0060g00050 emb1138 (VIT_14s0060g00060) VIT_14s0060g00070 VIT_14s0060g00080 VIT_14s0060g00090 VIT_14s0060g00110 VIT_14s0060g00150 VIT_14s0060g00160 VIT_14s0060g00170 VIT_14s0060g00200 VIT_14s0060g00210 VIT_14s0060g00220 VIT_14s0060g00250 VIT_14s0060g00270 RCI2B (VIT_14s0060g00280) VIT_14s0060g00290 Click to hide this line (Asterid) Asterid speciation node (click to collapse) Asterid (~10 My ago) - block_19 TreeBeST009453.B.b.b.a.b TreeBeST002065.A.g TreeBeST000095.B.a.b.b.b.b TreeBeST009775 TreeBeST007553 TreeBeST000358.C.b.a.b.a.a.a.b TreeBeST003097.b.b.b.a.b.b.a.a.a TreeBeST000052.E.a.b.b TreeBeST010840.B TreeBeST009822.B TreeBeST000876.A TreeBeST006315 TreeBeST006926 TreeBeST005761 TreeBeST000177.B.d TreeBeST008297.D.b.f TreeBeST005762 Click to show this node (Mimulus guttatus) Mimulus guttatus duplication node (click to collapse) Click to hide this line (Mimulus guttatus) Mimulus guttatus terminal node Mimulus guttatus - scaffold_2 Migut.B00892|Migut.B00892.1 Migut.B00894|Migut.B00894.1 Migut.B00895|Migut.B00895.1 Migut.B00896|Migut.B00896.1 Migut.B00897|Migut.B00897.1 Migut.B00898|Migut.B00898.1 Migut.B00899|Migut.B00899.1 Migut.B00900|Migut.B00900.1 Migut.B00901|Migut.B00901.1 Migut.B00902|Migut.B00902.1 Migut.B00903|Migut.B00903.1 Migut.B00904|Migut.B00904.1 Migut.B00908|Migut.B00908.1 Migut.B00909|Migut.B00909.1 Migut.B00910|Migut.B00910.1 Migut.B00911|Migut.B00911.1 Migut.B00912|Migut.B00912.1 Migut.B00913|Migut.B00913.1 Migut.B00914|Migut.B00914.1 Migut.B00915|Migut.B00915.1 Migut.B00916|Migut.B00916.1 Migut.B00917|Migut.B00917.1 Migut.B00918|Migut.B00918.1 Migut.B00919|Migut.B00919.1 Migut.B00920|Migut.B00920.1 Migut.B00921|Migut.B00921.1 Migut.B00922|Migut.B00922.1 Click to hide this line (Mimulus guttatus) Mimulus guttatus terminal node Mimulus guttatus - scaffold_14 Migut.N00972|Migut.N00972.1 Migut.N00973|Migut.N00973.1 Migut.N00974|Migut.N00974.1 Migut.N00975|Migut.N00975.1 Migut.N00976|Migut.N00976.1 Migut.N00978|Migut.N00978.1 Migut.N00979|Migut.N00979.1 Migut.N00980|Migut.N00980.1 Migut.N00981|Migut.N00981.1 Migut.N00985|Migut.N00985.1 Migut.N00987|Migut.N00987.1 Migut.N00988|Migut.N00988.1 Migut.N00989|Migut.N00989.1 Migut.N00990|Migut.N00990.1 Migut.N00991|Migut.N00991.1 Migut.N00992|Migut.N00992.1 Migut.N00993|Migut.N00993.1 Migut.N00994|Migut.N00994.1 Migut.N00995|Migut.N00995.1 Migut.N00996|Migut.N00996.1 Migut.N00997|Migut.N00997.1 Migut.N00998|Migut.N00998.1 Migut.N00999|Migut.N00999.1 Migut.N01000|Migut.N01000.1 Migut.N01001|Migut.N01001.1 Click to hide this line (Solanum) Solanum speciation node (click to collapse) Solanum (~10 My ago) - block_279 Click to hide this line (Solanum tuberosum) Solanum tuberosum terminal node Solanum tuberosum - Chr:10 PGSC0003DMG400009752 PGSC0003DMG400009754 PGSC0003DMG400009753 PGSC0003DMG400044702 PGSC0003DMG400018974 MLO4 (PGSC0003DMG400018975) PGSC0003DMG400018978 PGSC0003DMG400044506 PGSC0003DMG400046613 PGSC0003DMG400018977 PGSC0003DMG400047089 PGSC0003DMG400042286 PGSC0003DMG400046994 PGSC0003DMG400044675 PGSC0003DMG400036134 PGSC0003DMG400039246 PGSC0003DMG400040719 PGSC0003DMG400004327 PGSC0003DMG400004326 PGSC0003DMG400036106 PGSC0003DMG400037003 PGSC0003DMG400040476 PGSC0003DMG400040181 PGSC0003DMG400004325 PGSC0003DMG400004329 PGSC0003DMG400004324 PGSC0003DMG400004328 PGSC0003DMG400046320 PGSC0003DMG400011765 Click to hide this line (Solanum lycopersicum) Solanum lycopersicum terminal node Solanum lycopersicum - Chr:10 Solyc10g044490.1 Solyc10g044500.1 MLO4 (Solyc10g044510.1) SEND33 (Solyc10g044520.1) Solyc10g044530.1 Solyc10g044540.1 Solyc10g044550.1 Solyc10g044560.1 Solyc10g044580.1 Solyc10g044600.1 Solyc10g044610.1 Solyc10g044620.1 Solyc10g044630.1 Solyc10g044640.1 Solyc10g044660.1 Solyc10g044690.1 Solyc10g044700.1 Solyc10g044710.1 Solyc10g044720.1 Solyc10g044730.1 Solyc10g044740.1 Solyc10g044750.1 Solyc10g044770.1 RAD9 (Solyc10g044780.1) Solyc10g044790.1 Solyc10g044800.1 Solyc10g044810.1 Solyc10g044820.1 Solyc10g044830.1 Click to hide this line (Commelinids) Commelinids speciation node (click to collapse) Commelinids (~10 My ago) Click to hide this line (Musa acuminata subsp malaccensis) Musa acuminata subsp malaccensis terminal node Musa acuminata subsp malaccensis - Chr:8 GSMUA_Achr8G05980_001 GSMUA_Achr8G05990_001 GSMUA_Achr8G06000_001 GSMUA_Achr8G06010_001 GSMUA_Achr8G06020_001 GSMUA_Achr8G06030_001 GSMUA_Achr8G06040_001 GSMUA_Achr8G06050_001 GSMUA_Achr8G06060_001 GSMUA_Achr8G06070_001 GSMUA_Achr8G06080_001 GSMUA_Achr8G06090_001 GSMUA_Achr8G06100_001 GSMUA_Achr8G06110_001 GSMUA_Achr8G06120_001 GSMUA_Achr8G06140_001 GSMUA_Achr8G06150_001 GSMUA_Achr8G06160_001 GSMUA_Achr8G06170_001 GSMUA_Achr8G06180_001 GSMUA_Achr8G06190_001 GSMUA_Achr8G06200_001 GSMUA_Achr8G06220_001 GSMUA_Achr8G06230_001 GSMUA_Achr8G06240_001 GSMUA_Achr8G06250_001 GSMUA_Achr8G06260_001 GSMUA_Achr8G06270_001 GSMUA_Achr8G06280_001 Click to hide this line (Poaceae) Poaceae speciation node (click to collapse) Poaceae (~10 My ago) - block_7 TreeBeST000827.I.d TreeBeST000272.B TreeBeST000436.A.d.d TreeBeST009450.C.a.c TreeBeST000966.A.b TreeBeST000812.C.h TreeBeST008361.B.d.b.a.b.a.a.b.a.b.a.a.a.a.a.a TreeBeST008191.H TreeBeST003739.d TreeBeST008295.B.c.a EPlGT00230000080746 TreeBeST000044.B.c.d TreeBeST002580.A.e.b TreeBeST011173.A.f.b TreeBeST007843.A.b.e.a.a.a TreeBeST000118.B.c.b.b.b.d.a TreeBeST007877.D TreeBeST000317.A.a.b.a.a.a.b.b.b.b.b.b.b.a.a.a.a.a.a.a.d TreeBeST010711.A.b.b.b.a.a.a.a.a.b.a.b.b.b.b.b.b.d.b.a TreeBeST002562.A.a TreeBeST000762.e.a TreeBeST003121.a TreeBeST008014.A.b.d.a.b.b TreeBeST001375.A.e.c TreeBeST001875.A.a.c.b EPlGT00740000062602 TreeBeST001907.e.a TreeBeST001468.B.f TreeBeST002191.e EPlGT00140000010807 Click to hide this line (Panicoideae) Panicoideae speciation node (click to collapse) Panicoideae (~10 My ago) - block_1 TreeBeST008263.H TreeBeST002241.b TreeBeST007769.A.d.a.a.b.c TreeBeST000533.C.c.f.a TreeBeST002017.d TreeBeST007910.A.c.a.b.a.b.a EPlGT00140000000990.B TreeBeST003121.a TreeBeST000762.e.a TreeBeST002562.A.a TreeBeST010711.A.b.b.b.a.a.a.a.a.b.a.b.b.b.b.b.b.d.b.a.b TreeBeST010711.A.b.b.b.a.a.a.a.a.b.a.b.b.b.b.b.b.d.b.a.a TreeBeST000317.A.a.b.a.a.a.b.b.b.b.b.b.b.a.a.a.a.a.a.a.d TreeBeST007877.D TreeBeST000118.B.c.b.b.b.d.a TreeBeST007843.A.b.e.a.a.a TreeBeST011173.A.f.b TreeBeST002580.A.e.b TreeBeST000044.B.c.d EPlGT00230000080746 TreeBeST008295.B.c.a TreeBeST003739.d TreeBeST008191.H TreeBeST008361.B.d.b.a.b.a.a.b.a.b.a.a.a.a.a.a TreeBeST000812.C.h TreeBeST000966.A.b TreeBeST009450.C.a.c TreeBeST000436.A.d.d TreeBeST000272.B TreeBeST000827.I.d Click to show this node (Andropogoneae) Andropogoneae duplication node (click to collapse) Click to show this node (Andropogoneae) Andropogoneae speciation node (click to collapse) Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:1 GRMZM2G457346 GRMZM2G155738 AC190496.1_FG002 GRMZM2G155760 GRMZM2G155767 GRMZM2G046849 GRMZM2G046966 GRMZM2G047055 GRMZM2G423423 GRMZM2G059981 GRMZM2G059964 GRMZM2G359929 GRMZM2G073912 GRMZM5G863645 GRMZM2G015073 GRMZM5G867390 GRMZM5G862643 GRMZM5G813124 GRMZM2G583462 GRMZM5G826838 GRMZM5G825695 GRMZM2G412793 GRMZM2G077147 GRMZM2G477879 GRMZM5G857351 GRMZM2G047372 GRMZM2G585674 GRMZM2G056909 GRMZM2G056914 GRMZM2G107540 Click to hide this line (Andropogoneae) Andropogoneae speciation node (click to collapse) Andropogoneae (~10 My ago) - block_1 TreeBeST008263.H.d TreeBeST002241.b.d TreeBeST007769.A.d.a.a.b.c TreeBeST000533.C.c.f.a TreeBeST002017.d TreeBeST007910.A.c.a.b.a.b.a EPlGT00140000000990.B TreeBeST003121.a.e TreeBeST000762.e.a TreeBeST002562.A.a.b.b TreeBeST010711.A.b.b.b.a.a.a.a.a.b.a.b.b.b.b.b.b.d.b.a.a TreeBeST000317.A.a.b.a.a.a.b.b.b.b.b.b.b.a.a.a.a.a.a.a.d TreeBeST007877.D.l TreeBeST007877.D.k TreeBeST000118.B.c.b.b.b.d.a TreeBeST007843.A.b.e.a.a.a.a TreeBeST007843.A.b.e.a.a.a.b TreeBeST011173.A.f.b TreeBeST002580.A.e.b TreeBeST000044.B.c.d EPlGT00230000080746 TreeBeST008295.B.c.a TreeBeST003739.d TreeBeST008191.H.d TreeBeST008121.E TreeBeST000812.C.h TreeBeST000966.A.b TreeBeST009450.C.a.c.d TreeBeST003986.B Click to hide this line (Zea mays) Zea mays terminal node Zea mays - Chr:5 GRMZM5G839032 GRMZM2G104316 GRMZM2G104332 GRMZM2G104342 GRMZM2G543920 GRMZM2G096596 GRMZM2G096591 GRMZM5G878347 GRMZM2G046055 GRMZM2G045955 GRMZM2G045941 GRMZM2G045690 GRMZM2G093139 GRMZM2G181000 GRMZM2G181002 GRMZM5G829476 GRMZM2G455869 GRMZM2G425236 GRMZM2G152328 GRMZM2G152548 GRMZM5G833140 GRMZM2G459543 GRMZM2G131080 GRMZM2G158359 GRMZM2G408897 GRMZM2G070765 AC215181.3_FG004 GRMZM2G114789 GRMZM2G131324 GRMZM2G347645 Click to show this node (Sorghum bicolor) Sorghum bicolor duplication node (click to collapse) Click to show this node (Sorghum bicolor) Sorghum bicolor duplication node (click to collapse) Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:1 Sb01g009800 Sb01g009810 Sb01g009820 Sb01g009830 Sb01g009835 Sb01g009840 Sb01g009850 Sb01g009860 Sb01g009863 Sb01g009866 Sb01g009870 Sb01g009880 Sb01g009890 Sb01g009900 Sb01g009910 Sb01g009933 Sb01g009936 Sb01g009940 Sb01g009950 Sb01g009960 Sb01g009965 Sb01g009970 Sb01g009980 Sb01g009990 Sb01g009995 Sb01g010000 Sb01g010010 Sb01g010020 Sb01g010025 Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:1 Sb01g009810 Sb01g009820 Sb01g009830 Sb01g009835 Sb01g009840 Sb01g009850 Sb01g009860 Sb01g009863 Sb01g009866 Sb01g009870 Sb01g009880 Sb01g009890 Sb01g009900 Sb01g009910 Sb01g009933 Sb01g009936 Sb01g009940 Sb01g009950 Sb01g009960 Sb01g009965 Sb01g009970 Sb01g009980 Sb01g009990 Sb01g009995 Sb01g010000 Sb01g010010 Sb01g010020 Sb01g010025 AC1 (Sb01g010030) Click to hide this line (Sorghum bicolor) Sorghum bicolor terminal node Sorghum bicolor - Chr:GL003512.1 Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - Chr:9 Si035411m.g Si035791m.g Si034255m.g Si034136m.g Si039561m.g Si037973m.g Si039354m.g Si036818m.g Si040744m.g Si034811m.g Si039987m.g Si037256m.g Si036070m.g Si034833m.g Si036340m.g Si040351m.g Si038786m.g Si038436m.g Si040517m.g Si033999m.g Si036077m.g Si034805m.g Si038211m.g Si035144m.g Si040754m.g Si034686m.g Si038564m.g Si036975m.g Si040760m.g Si036200m.g Click to hide this line (BEP clade) BEP clade speciation node (click to collapse) BEP clade (~10 My ago) - block_8 TreeBeST005563.b TreeBeST008263.H TreeBeST002241.b TreeBeST007769.A.d.a.a.b.c TreeBeST000533.C.c.f.a TreeBeST002017.d TreeBeST007910.A.c.a.b.a.b.a EPlGT00140000000990.B TreeBeST003121.a TreeBeST000762.e.a TreeBeST002562.A.a TreeBeST010711.A.b.b.b.a.a.a.a.a.b.a.b.b.b.b.b.b.d.b.a TreeBeST000317.A.a.b.a.a.a.b.b.b.b.b.b.b.a.a.a.a.a.a.a.d TreeBeST007877.D TreeBeST000118.B.c.b.b.b.d.a TreeBeST007843.A.b.e.a.a.a TreeBeST011173.A.f.b TreeBeST002580.A.e.b TreeBeST000044.B.c.d EPlGT00230000080746 TreeBeST008295.B.c.a TreeBeST003739.d TreeBeST008191.H TreeBeST008361.B.d.b.a.b.a.a.b.a.b.a.a.a.a.a.a TreeBeST000812.C.h TreeBeST000966.A.b TreeBeST009450.C.a.c TreeBeST000436.A.d.d TreeBeST000272.B TreeBeST000827.I.d Click to show this node (Pooideae) Pooideae duplication node (click to collapse) Click to show this node (Pooideae) Pooideae speciation node (click to collapse) Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:1 BRADI1G10360 BRADI1G10370 BRADI1G10380 BRADI1G10390 BRADI1G10400 BRADI1G10410 BRADI1G10420 BRADI1G10430 BRADI1G10440 BRADI1G10447 BRADI1G10460 BRADI1G10470 BRADI1G10480 BRADI1G10490 BRADI1G10500 BRADI1G10530 BRADI1G10540 BRADI1G10550 BRADI1G10560 BRADI1G10567 BRADI1G10580 BRADI1G10590 BRADI1G10600 BRADI1G10610 BRADI1G10620 BRADI1G10630 BRADI1G10640 BRADI1G10650 BRADI1G10660 Click to hide this line (Pooideae) Pooideae speciation node (click to collapse) Pooideae (~10 My ago) - block_9 TreeBeST000730.C.c TreeBeST002924.c.b.a TreeBeST009730.B TreeBeST000827.I.d TreeBeST000436.A.d.d TreeBeST009450.C.a.c TreeBeST000966.A.b TreeBeST008361.B.d.b.a.b.a.a.b.a.b.a.a.a.a.a.a.b TreeBeST008191.H TreeBeST003739.d EPlGT00230000080746.a TreeBeST000044.B.c.d TreeBeST002580.A.e.b TreeBeST011173.A.f.b TreeBeST007843.A.b.e.a.a.a TreeBeST000118.B.c.b.b.b.d.a TreeBeST007877.D TreeBeST000317.A.a.b.a.a.a.b.b.b.b.b.b.b.a.a.a.a.a.a.a.d TreeBeST010711.A.b.b.b.a.a.a.a.a.b.a.b.b.b.b.b.b.d.b.a TreeBeST002562.A.a TreeBeST000762.e.a TreeBeST003121.a EPlGT00140000000990.B TreeBeST007910.A.c.a.b.a.b.a TreeBeST002017.d TreeBeST000533.C.c.f.a TreeBeST007769.A.d.a.a.b.c TreeBeST002241.b TreeBeST008263.H TreeBeST005563.b Click to hide this line (Brachypodium distachyon) Brachypodium distachyon terminal node Brachypodium distachyon - Chr:1 BRADI1G10370 BRADI1G10380 BRADI1G10390 BRADI1G10400 BRADI1G10410 BRADI1G10420 BRADI1G10430 BRADI1G10440 BRADI1G10447 BRADI1G10460 BRADI1G10470 BRADI1G10480 BRADI1G10490 BRADI1G10500 BRADI1G10530 BRADI1G10540 BRADI1G10550 BRADI1G10560 BRADI1G10567 BRADI1G10580 BRADI1G10590 BRADI1G10600 BRADI1G10610 BRADI1G10620 BRADI1G10630 BRADI1G10640 BRADI1G10650 BRADI1G10660 BRADI1G10670 Click to show this node (Triticeae) Triticeae duplication node (click to collapse) Click to show this node (Triticeae) Triticeae duplication node (click to collapse) Click to show this node (Triticeae) Triticeae speciation node (click to collapse) Click to hide this line (Triticum) Triticum speciation node (click to collapse) Triticum (~10 My ago) - block_113 EPlGT00730000061732 TreeBeST000118.B.c.b.b.b.d.a.a.b.a TreeBeST007877.D.m.a Click to hide this line (Triticum urartu) Triticum urartu terminal node Triticum urartu - scaffold3657 TRIUR3_07852 TRIUR3_07853 TRIUR3_07854 TRIUR3_07856 Click to hide this line (Triticum aestivum) Triticum aestivum terminal node Triticum aestivum Click to show this node (Triticeae) Triticeae duplication node (click to collapse) Click to show this node (Triticeae) Triticeae speciation node (click to collapse) Click to show this node (Triticum) Triticum speciation node (click to collapse) Click to hide this line (Triticum aestivum) Triticum aestivum terminal node Triticum aestivum Click to hide this line (Triticeae) Triticeae speciation node (click to collapse) Triticeae (~10 My ago) - block_1037 TreeBeST000118.B.c.b.b.b.d.a.a.b.b TreeBeST007843.A.b.e.a.a.a.c Click to show this node (Triticum) Triticum speciation node (click to collapse) Click to hide this line (Triticum aestivum) Triticum aestivum terminal node Triticum aestivum Click to hide this line (Aegilops tauschii) Aegilops tauschii terminal node Aegilops tauschii - Chr:Scaffold76835 F775_07346 F775_02533 Click to show this node (Triticeae) Triticeae speciation node (click to collapse) Click to hide this line (Hordeum vulgare subsp vulgare) Hordeum vulgare subsp vulgare terminal node Hordeum vulgare subsp vulgare - Chr:4 MLOC_52030 MLOC_72162 MLOC_68493 MLOC_68494 MLOC_70444 MLOC_70277 MLOC_74226 MLOC_57218 MLOC_72638 MLOC_9505 MLOC_64588 MLOC_19422 MLOC_58062 MLOC_58063 MLOC_63077 MLOC_76797 MLOC_53721 MLOC_53722 MLOC_49818 MLOC_63737 MLOC_63735 MLOC_63736 MLOC_61690 MLOC_61692 MLOC_69374 MLOC_74713 MLOC_67500 MLOC_38489 MLOC_63926 MLOC_12678 Click to hide this line (Oryzeae) Oryzeae speciation node (click to collapse) Oryzeae (~10 My ago) - block_2 TreeBeST000272.B TreeBeST000436.A.d.d TreeBeST002569.A.c TreeBeST009450.C.a.c TreeBeST000966.A.b TreeBeST000812.C.h TreeBeST008361.B.d.b.a.b.a.a.b.a.b.a.a.a.a.a.a TreeBeST008191.H TreeBeST003739.d TreeBeST008295.B.c.a EPlGT00230000080746 TreeBeST000044.B.c.d TreeBeST002580.A.e.b TreeBeST011173.A.f.b TreeBeST007843.A.b.e.a.a.a TreeBeST000118.B.c.b.b.b.d.a TreeBeST007877.D TreeBeST000317.A.a.b.a.a.a.b.b.b.b.b.b.b.a.a.a.a.a.a.a.d TreeBeST010711.A.b.b.b.a.a.a.a.a.b.a.b.b.b.b.b.b.d.b.a TreeBeST002562.A.a TreeBeST000762.e.a TreeBeST003121.a EPlGT00140000000990.B TreeBeST007910.A.c.a.b.a.b.a TreeBeST002017.d TreeBeST000533.C.c.f.a.b TreeBeST007769.A.d.a.a.b.c TreeBeST002241.b TreeBeST008263.H TreeBeST005563.b Click to hide this line (Leersia perrieri) Leersia perrieri terminal node Leersia perrieri - Chr:3 LPERR03G26650 LPERR03G26660 LPERR03G26670 LPERR03G26680 LPERR03G26690 LPERR03G26710 LPERR03G26720 LPERR03G26730 LPERR03G26740 LPERR03G26750 LPERR03G26760 LPERR03G26770 LPERR03G26780 LPERR03G26790 LPERR03G26800 LPERR03G26820 LPERR03G26830 LPERR03G26840 LPERR03G26850 LPERR03G26860 LPERR03G26870 LPERR03G26880 LPERR03G26890 LPERR03G26900 LPERR03G26910 LPERR03G26920 LPERR03G26930 LPERR03G26940 LPERR03G26950 LPERR03G26960 Click to hide this line (Oryza) Oryza speciation node (click to collapse) Oryza (~10 My ago) - block_3 TreeBeST002017.d.f TreeBeST007910.A.c.a.b.a.b.a EPlGT00230000079969.G.a.a EPlGT00140000000990.B.a.a EPlGT00140000023733 TreeBeST003121.a TreeBeST000762.e.a TreeBeST002562.A.a TreeBeST010711.A.b.b.b.a.a.a.a.a.b.a.b.b.b.b.b.b.d.b.a FAM42100 TreeBeST011066.C.c.a.a TreeBeST000317.A.a.b.a.a.a.b.b.b.b.b.b.b.a.a.a.a.a.a.a.d EPlGT00730000053896.a.b TreeBeST007877.D TreeBeST000118.B.c.b.b.b.d.a EPlGT00750000075497 TreeBeST007843.A.b.e.a.a.a TreeBeST011173.A.f.b TreeBeST002580.A.e.b EPlGT00140000023919 TreeBeST001137.A.g.b TreeBeST000044.B.c.d EPlGT00230000080746 TreeBeST008295.B.c.a TreeBeST003739.d TreeBeST008191.H TreeBeST008361.B.d.b.a.b.a.a.b.a.b.a.a.a.a.a.a TreeBeST000812.C.h TreeBeST000966.A.b TreeBeST009450.C.a.c Click to hide this line (Oryza brachyantha) Oryza brachyantha terminal node Oryza brachyantha - Chr:3 OB03G39070 OB03G39080 OB03G39090 OB03G39100 OB03G39110 OB03G39120 OB03G39130 OB03G39140 OB03G39150 OB03G39160 OB03G39170 OB03G39180 OB03G39190 OB03G39200 OB03G39210 OB03G39230 OB03G39240 OB03G39250 OB03G39260 OB03G39270 OB03G39280 OB03G39290 OB03G39300 OB03G39310 OB03G39320 OB03G39330 OB03G39340 OB03G39350 OB03G39360 OB03G39370 Click to hide this line (Oryza glaberrima) Oryza glaberrima terminal node Oryza glaberrima - Chr:Oglab03_unplaced058 ORGLA03G0408600 ORGLA03G0408700 ORGLA03G0408800 ORGLA03G0408900 ORGLA03G0409000 ORGLA03G0409100 ORGLA03G0409200 ORGLA03G0409300 ORGLA03G0409400 ORGLA03G0409500 ORGLA03G0409600 ORGLA03G0409700 ORGLA03G0409800 ORGLA03G0409900 ORGLA03G0410000 ORGLA03G0410200 ORGLA03G0410300 ORGLA03G0410400 ORGLA03G0410500 ORGLA03G0410600 ORGLA03G0410700 ORGLA03G0410800 ORGLA03G0410900 ORGLA03G0411000 ORGLA03G0411100 ORGLA03G0411200 ORGLA03G0411300 ORGLA03G0411400 ORGLA03G0411500 ORGLA03G0411600 Click to hide this line (Oryza barthii) Oryza barthii terminal node Oryza barthii - Chr:3 OBART03G32000 OBART03G32010 OBART03G32020 OBART03G32030 OBART03G32040 OBART03G32050 OBART03G32070 OBART03G32080 OBART03G32090 OBART03G32100 OBART03G32110 OBART03G32120 OBART03G32130 OBART03G32140 OBART03G32150 OBART03G32170 OBART03G32180 OBART03G32190 OBART03G32200 OBART03G32210 OBART03G32220 OBART03G32230 OBART03G32240 OBART03G32250 OBART03G32260 OBART03G32270 OBART03G32280 OBART03G32290 OBART03G32300 OBART03G32310 Click to hide this line (Oryza sativa) Oryza sativa speciation node (click to collapse) Oryza sativa (~10 My ago) - block_3 TreeBeST000533.C.c.f.a.b TreeBeST002017.d.e.b TreeBeST007910.A.c.a.b.a.b.a EPlGT00230000079969.G.a.a EPlGT00140000000990.B.a.a EPlGT00140000023733 TreeBeST003121.a TreeBeST000762.e.a TreeBeST002562.A.a TreeBeST010711.A.b.b.b.a.a.a.a.a.b.a.b.b.b.b.b.b.d.b.a TreeBeST011066.C.c.a.a TreeBeST000317.A.a.b.a.a.a.b.b.b.b.b.b.b.a.a.a.a.a.a.a.d EPlGT00730000053896.a.b TreeBeST007877.D TreeBeST000118.B.c.b.b.b.d.a TreeBeST007843.A.b.e.a.a.a TreeBeST011173.A.f.b TreeBeST002580.A.e.b EPlGT00140000023919 TreeBeST001137.A.g.b TreeBeST000044.B.c.d EPlGT00230000080746 TreeBeST003739.d TreeBeST008191.H TreeBeST011035.I.b.a.b TreeBeST008361.B.d.b.a.b.a.a.b.a.b.a.a.a.a.a.a TreeBeST000812.C.h TreeBeST000966.A.b TreeBeST009450.C.a.c TreeBeST002569.A.c Click to hide this line (Oryza sativa Japonica Group) Oryza sativa Japonica Group terminal node Oryza sativa Japonica Group - Chr:3 ACT1 (OS03G0718100) OS03G0718150 OS03G0718200 OS03G0718300 OS03G0718500 OS03G0718600 OS03G0718650 OS03G0718800 OS03G0719000 SIZ2 (OS03G0719100) OS03G0719300 OS03G0719400 OS03G0719450 OS03G0719500 OS03G0719700 OS03G0719850 OS03G0719900 OS03G0720300 OS03G0720400 OS03G0720500 OS03G0720800 OS03G0721200 OS03G0721300 OS03G0721400 OS03G0721700 OS03G0721900 OS03G0722000 OS03G0722100 OS03G0722200 OS03G0722400 Click to hide this line (Oryza sativa Indica Group) Oryza sativa Indica Group terminal node Oryza sativa Indica Group - Chr:3 BGIOSGA009914 ACT1 (BGIOSGA013463) BGIOSGA009913 BGIOSGA013464 BGIOSGA009912 BGIOSGA009911 BGIOSGA013465 BGIOSGA009910 BGIOSGA013466 BGIOSGA013467 BGIOSGA009909 BGIOSGA009908 BGIOSGA013468 BGIOSGA013469 BGIOSGA009907 BGIOSGA009905 BGIOSGA009904 BGIOSGA009903 BGIOSGA013470 BGIOSGA013471 BGIOSGA013472 BGIOSGA009902 BGIOSGA013473 BGIOSGA009901 BGIOSGA009900 BGIOSGA013474 BGIOSGA009899 BGIOSGA013475 BGIOSGA013476 BGIOSGA009898 Click to hide this line (Oryza rufipogon) Oryza rufipogon terminal node Oryza rufipogon - Chr:3 ORUFI03G33400 ORUFI03G33410 ORUFI03G33420 ORUFI03G33430 ORUFI03G33450 ORUFI03G33460 ORUFI03G33470 ORUFI03G33480 ORUFI03G33490 ORUFI03G33500 ORUFI03G33510 ORUFI03G33520 ORUFI03G33530 ORUFI03G33540 ORUFI03G33550 ORUFI03G33570 ORUFI03G33580 ORUFI03G33590 ORUFI03G33600 ORUFI03G33610 ORUFI03G33620 ORUFI03G33630 ORUFI03G33640 ORUFI03G33650 ORUFI03G33660 ORUFI03G33670 ORUFI03G33680 ORUFI03G33690 ORUFI03G33700 ORUFI03G33710 Click to hide this line (Oryza nivara) Oryza nivara terminal node Oryza nivara - Chr:3 ONIVA03G33510 ONIVA03G33520 ONIVA03G33530 ONIVA03G33540 ONIVA03G33550 ONIVA03G33560 ONIVA03G33570 ONIVA03G33590 ONIVA03G33600 ONIVA03G33610 ONIVA03G33620 ONIVA03G33630 ONIVA03G33640 ONIVA03G33650 ONIVA03G33660 ONIVA03G33680 ONIVA03G33690 ONIVA03G33700 ONIVA03G33710 ONIVA03G33720 ONIVA03G33730 ONIVA03G33740 ONIVA03G33750 ONIVA03G33760 ONIVA03G33770 ONIVA03G33780 ONIVA03G33790 ONIVA03G33800 ONIVA03G33810 ONIVA03G33820 Click to hide this line (Oryza glumipatula) Oryza glumipatula terminal node Oryza glumipatula - Chr:2 OGLUM02G34730 OGLUM02G34740 OGLUM02G34750 OGLUM02G34760 OGLUM02G34770 OGLUM02G34790 OGLUM02G34800 OGLUM02G34810 OGLUM02G34820 OGLUM02G34830 OGLUM02G34840 OGLUM02G34850 OGLUM02G34860 OGLUM02G34870 OGLUM02G34880 OGLUM02G34900 OGLUM02G34910 OGLUM02G34920 OGLUM02G34930 OGLUM02G34940 OGLUM02G34950 OGLUM02G34960 OGLUM02G34970 OGLUM02G34980 OGLUM02G34990 OGLUM02G35000 OGLUM02G35010 OGLUM02G35020 OGLUM02G35030 OGLUM02G35040 Click to hide this line (Oryza meridionalis) Oryza meridionalis terminal node Oryza meridionalis - Chr:3 OMERI03G27800 OMERI03G27810 OMERI03G27820 OMERI03G27840 OMERI03G27850 OMERI03G27860 OMERI03G27870 OMERI03G27880 OMERI03G27890 OMERI03G27900 OMERI03G27910 OMERI03G27920 OMERI03G27930 OMERI03G27940 OMERI03G27950 OMERI03G27970 OMERI03G27980 OMERI03G27990 OMERI03G28000 OMERI03G28010 OMERI03G28020 OMERI03G28030 OMERI03G28040 OMERI03G28050 OMERI03G28060 OMERI03G28070 OMERI03G28080 OMERI03G28090 OMERI03G28100 OMERI03G28110 Click to hide this line (Oryza punctata) Oryza punctata terminal node Oryza punctata - Chr:3 OPUNC03G29170 OPUNC03G29180 OPUNC03G29190 OPUNC03G29200 OPUNC03G29210 OPUNC03G29230 OPUNC03G29240 OPUNC03G29250 OPUNC03G29260 OPUNC03G29270 OPUNC03G29280 OPUNC03G29290 OPUNC03G29300 OPUNC03G29310 OPUNC03G29320 OPUNC03G29340 OPUNC03G29350 OPUNC03G29360 OPUNC03G29370 OPUNC03G29380 OPUNC03G29390 OPUNC03G29400 OPUNC03G29410 OPUNC03G29420 OPUNC03G29430 OPUNC03G29440 OPUNC03G29450 OPUNC03G29460 OPUNC03G29470 OPUNC03G29480 Click to hide this line (Amborella trichopoda) Amborella trichopoda terminal node Amborella trichopoda - Chr:AmTr_v1.0_scaffold00045 AMTR_s00045p00143690 AMTR_s00045p00143760 AMTR_s00045p00143830 AMTR_s00045p00145150 AMTR_s00045p00145880 AMTR_s00045p00146460 AMTR_s00045p00146910 AMTR_s00045p00147920 AMTR_s00045p00149350 AMTR_s00045p00149950 AMTR_s00045p00150380 AMTR_s00045p00151360 AMTR_s00045p00152960 AMTR_s00045p00154250 AMTR_s00045p00154580 AMTR_s00045p00154890 AMTR_s00045p00155990 AMTR_s00045p00156730 AMTR_s00045p00157300 AMTR_s00045p00157760 AMTR_s00045p00158000 AMTR_s00045p00158480 AMTR_s00045p00158740 AMTR_s00045p00159230 AMTR_s00045p00159520 AMTR_s00045p00160070 AMTR_s00045p00160510 Click to show this node (Magnoliophyta) Magnoliophyta speciation node (click to collapse) Click to hide this line (Mesangiospermae) Mesangiospermae speciation node (click to collapse) Mesangiospermae (~10 My ago) Click to show this node (Commelinids) Commelinids speciation node (click to collapse) Click to show this node (Poaceae) Poaceae speciation node (click to collapse) Click to show this node (Panicoideae) Panicoideae speciation node (click to collapse) Click to hide this line (Setaria italica) Setaria italica terminal node Setaria italica - Chr:8 Si026652m.g Si027812m.g Si027906m.g Si027575m.g Si026986m.g Si027223m.g Si028634m.g Si026646m.g Si026572m.g Si028136m.g Si026570m.g Si026470m.g Si028167m.g Si025907m.g Si028279m.g Si027060m.g Si025997m.g Si028592m.g Si027974m.g Si025900m.g Si028139m.g Si028028m.g Si028610m.g Si027886m.g Si027198m.g Si026819m.g Si027019m.g Si026053m.g Si026215m.g Si025861m.g Click to show this node (Pentapetalae) Pentapetalae speciation node (click to collapse) Click to show this node (rosids) rosids speciation node (click to collapse) Click to show this node (Eurosids) Eurosids speciation node (click to collapse) Click to show this node (Malvidae) Malvidae speciation node (click to collapse) Click to show this node (Malvids) Malvids speciation node (click to collapse) Click to show this node (Brassicales) Brassicales speciation node (click to collapse) Click to hide this line (Carica papaya) Carica papaya terminal node Carica papaya - Chr:supercontig_136 evm.TU.supercontig_136.11 evm.TU.supercontig_136.12 evm.TU.supercontig_136.13 evm.TU.supercontig_136.14 evm.TU.supercontig_136.15 evm.TU.supercontig_136.16 evm.TU.supercontig_136.17 evm.TU.supercontig_136.18 evm.TU.supercontig_136.20 evm.TU.supercontig_136.21 evm.TU.supercontig_136.22 evm.TU.supercontig_136.23 evm.TU.supercontig_136.24 evm.TU.supercontig_136.27 evm.TU.supercontig_136.28 evm.TU.supercontig_136.29 evm.TU.supercontig_136.30 evm.TU.supercontig_136.31 evm.TU.supercontig_136.32 evm.TU.supercontig_136.33 evm.TU.supercontig_136.34 evm.TU.supercontig_136.35 evm.TU.supercontig_136.36 evm.TU.supercontig_136.37 evm.TU.supercontig_136.38 evm.TU.supercontig_136.39 evm.TU.supercontig_136.40 evm.TU.supercontig_136.41 TreeBeST008248.B.d.a.b.b.d.b TreeBeST008248.B.d.a.b.b.d.b TreeBeST008248.B.d.a.b.b.d.b TreeBeST008248.B.d.a.b.b.d.b ATRAB11C (AT1G09630) ATRAB11C (scaffold_101002.1) Carubv10010267m.g Aa_G516380.t1 ATRAB11C (Bo5g010050) ATRAB11C (Bra020006) TreeBeST008248.B.d.a.b.b.d.b TreeBeST008248.B.d.a.b.b.d.b Tp1g08240 Thhalv10008742m.g Th12020 Th26085 TreeBeST001390.e.a.a.b.b.a.b.b.b TreeBeST001390.e.a.a.b.b.a.b.b.b.c TreeBeST001390.e.a.a.b.b.a.b.b.b.c RPL21A (AT1G09690) Carubv10010433m.g TreeBeST001390.e.a.a.b.b.a.b.b.b TreeBeST001390.e.a.a.b.b.a.b.b.b Thhalv10008955m.g Thhalv10008951m.g TreeBeST001390.e.a.a.b.b.a.b.b.a.a.b TreeBeST001390.e.a.a.b.b.a.b.b.a.a.b TreeBeST001390.e.a.a.b.b.a.b.b.b.d TreeBeST001390.e.a.a.b.b.a.b.b.a.a.b fgenesh2_kg.1__1011__AT1G09590.1 scaffold_101008.1 Carubv10010498m.g Aa_G516410.t1 Aa_G160960.t1 Bo5g010020 Bo5g010100 Bra020009 Bra020000 TreeBeST001390.e.a.a.b.b.a.b.b.a.a.a.b.b.a.b Bo8g110940 Bo8g110990 Bra031682 Bra031673 Tp1g08200 Tp1g08280 Th12026 Th26087 TreeBeST002407.e.a AT1G09470 fgenesh2_kg.1__994__AT1G09470.1 TreeBeST007840.G.a TreeBeST007840.G.a TreeBeST007840.G.a AT1G09680 scaffold_101007.1 Carubv10008618m.g Aa_G160970.t1 Bo5g010090 Bra020001 TreeBeST007840.G.a TreeBeST007840.G.a Tp1g08270 Thhalv10007116m.g Aa_G160990.t1 chr5.CM0048.220.r2.m mrna22949.1-v1.0-hybrid Migut.B00906|Migut.B00906.1 TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b PHYA (AT1G09570) PHYA (fgenesh2_kg.1__1007__AT1G09570.1) Carubv10008141m.g Aa_G516460.t1 TreeBeST000790.B.c.b.b.k.a Bo5g009990 Bra020013 TreeBeST000790.B.c.b.b.k.b Bo8g111060 Bra031672 TreeBeST000790.B.c.b.b.l Tp1g08170 Thhalv10006625m.g Th12029 Th26090 evm.TU.supercontig_48.231 Gorai.013G203900|Gorai.013G203900.1 TreeBeST000790.B.c.b.b.h Gorai.007G292800|Gorai.007G292800.1 TCM_047056 Ciclev10027712m.g|Ciclev10027712m TreeBeST000790.B.c.b.b PHYA (POPTR_0013s00220) TreeBeST000790.B.c.b.b GLYMA03G38620 GLYMA19G41210 TreeBeST000790.B.c.b.b.n GLYMA10G28170 GLYMA20G22160 chr5.CM0048.230.r2.m PHYA (MTR_1g085160) TreeBeST000790.B.c.b.b PHYA (PRUPE_ppa000643mg) mrna22948.1-v1.0-hybrid PHYA (VIT_14s0060g00100) TreeBeST000790.B.c.b.b Migut.B00907|Migut.B00907.1 Migut.N00986|Migut.N00986.1 TreeBeST000790.B.c.b.b PHYA (PGSC0003DMG400015766) PHYA (Solyc10g044670.1) TreeBeST000790.B.c.b.b GSMUA_Achr8G06130_001 TreeBeST000790.B.c.b.b TreeBeST000790.B.c.b.b GRMZM2G157727 TreeBeST000790.B.c.b.b.b TreeBeST000790.B.c.b.b.a GRMZM2G181028 Sb01g009920 Sb01g009930 Sb01g009920 Sb01g009930 Sb0919s002010 Si033984m.g TreeBeST000790.B.c.b.b BRADI1G10510 BRADI1G10520 TreeBeST000790.B.c.b.b.d BRADI1G10510 BRADI1G10520 TreeBeST000790.B.c.b.b.d.a.a TRIUR3_07855 TreeBeST000790.B.c.b.b.d.a.b.b F775_15473 MLOC_81684 TreeBeST000790.B.c.b.b LPERR03G26810 TreeBeST000790.B.c.b.b OB03G39220 ORGLA03G0410100 OBART03G32160 TreeBeST000790.B.c.b.b PHYA (OS03G0719800) BGIOSGA009906 ORUFI03G33560 ONIVA03G33670 OGLUM02G34890 OMERI03G27960 OPUNC03G29330 AMTR_s00045p00153850 TreeBeST000790.B.c.b.a Si027327m.g evm.TU.supercontig_136.25 evm.TU.supercontig_136.26 RPL21A (AT1G09590) TreeBeST000020.C.b.b.a.a TreeBeST000020.C.b.b.a.a TreeBeST000020.C.b.b.a.a TreeBeST000020.C.b.b.a.a TreeBeST000020.C.b.b.a.a TreeBeST000020.C.b.b.a.a TreeBeST000020.C.b.b.a.a TreeBeST000020.C.b.b.a.a PIF3 (AT1G09530) PIF3 (fgenesh2_kg.1__1002__AT1G09530.2) Carubv10008815m.g Aa_G73490.t1 Bo5g009910 Bra020017 TreeBeST000020.C.b.b.a.a.g Bo8g111120 Bra031668 TreeBeST000020.C.b.b.a.a.h Tp1g08130 Thhalv10007343m.g Th26094 TreeBeST000020.C.b.b.a.a TCM_026851 Ciclev10027890m.g|Ciclev10027890m TreeBeST000020.C.b.b.a.a POPTRDRAFT_662518 (POPTR_0013s00310) GLYMA03G38675 GLYMA19G41261 TreeBeST000020.C.b.b.a.a.f GLYMA10G28290 GLYMA20G22291 chr5.CM0048.80.r2.d PIF3 (PRUPE_ppa001899mg) PIF3 (VIT_14s0060g00260) TreeBeST003657.c.b.b TreeBeST003657.c.b.b TreeBeST003657.c.b.b TreeBeST003657.c.b.b AT1G09450 fgenesh1_pm.C_scaffold_1000768 Carubv10008644m.g TreeBeST003657.c.b.b TreeBeST003657.c.b.b Tp1g08060 Thhalv10007117m.g Th12038 TreeBeST003657.c.b.a evm.TU.supercontig_48.218 GLYMA03G38780 TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.b.b TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.b.b TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.b.b.a AT1G09490 fgenesh2_kg.1__996__AT1G09490.1 Carubv10009753m.g Bo5g009840 Bo5g009860 Bo5g009880 Bo5g009890 Bra020021 Bra020020 Bra020019 TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.b.b.d TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.b.b.d Tp1g08100 Thhalv10008138m.g TreeBeST002407.e TreeBeST002407.e TreeBeST002407.e TreeBeST002407.e.b AT1G09483 Carubv10009671m.g Bra020022 TreeBeST002407.e TreeBeST002407.e Tp1g08080 Thhalv10008143m.g Th12036 TreeBeST002407.f.c.a evm.TU.supercontig_48.220 TreeBeST002407.f.d TreeBeST000108.D.a.b.f TreeBeST000108.D.a.b.f TreeBeST000108.D.a.b.f TreeBeST000108.D.a.b.f AT1G09660 fgenesh2_kg.1__1021__AT1G09660.1 Carubv10009882m.g Aa_G161020.t1 Bo5g010070 Bra020003 TreeBeST000108.D.a.b.f.a.a TreeBeST000108.D.a.b.f.b Thhalv10008323m.g Th26083 TreeBeST000271.B.c.b.a.a.b.b TreeBeST000271.B.c.b.a.a.b.b TreeBeST000271.B.c.b.a.a.b.b TreeBeST000271.B.c.b.a.a.b.b GXM1 (AT1G09610) scaffold_100999.1 Carubv10011736m.g TreeBeST000271.B.c.b.a.a.b.b TreeBeST000271.B.c.b.a.a.b.b Tp1g08220 Thhalv10009538m.g Th12023 TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.a.a.b TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.a.a.b AT1G09500 fgenesh2_kg.1__999__AT1G09500.1 Carubv10009736m.g TreeBeST009826.A.b TreeBeST009826.A.b TreeBeST009826.A.b TreeBeST009826.A.b AT1G09520 fgenesh2_kg.1__1001__AT1G09520.1 Carubv10012528m.g Aa_G73520.t1 Bo5g009900 Bra020018 TreeBeST009826.A.b.d Bra031667 TreeBeST009826.A.b.d Tp1g08120 Thhalv10008580m.g Th12035 Th26098 TreeBeST009826.A.b TreeBeST009826.A.b TreeBeST009826.A.b Migut.B00893|Migut.B00893.1 Migut.N00971|Migut.N00971.1 TreeBeST001030.b.b.b.b.b.a.a.b.b.b.a.b.a.a.b.a AT1G09650 fgenesh2_kg.1__1019__AT1G09650.1 TreeBeST007570.f.a.b.b.b TreeBeST007570.f.a.b.b.b.i.b TreeBeST007570.f.a.b.b.b.i.b TreeBeST007570.f.a.b.b.b.i.b AT1G09600 Carubv10008488m.g Bo5g010030 Bra020008 TreeBeST007570.f.a.b.b.b.i.b.b TreeBeST007570.f.a.b.b.b.i.b.b Tp1g08210 Thhalv10006949m.g Th12024 Aa_G516400.t1 Bo8g111050 Bra031674 Gorai.013G202600|Gorai.013G202600.1 TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.b.b.b AT1G09480 EPlGT00140000030561 AT1G09625 scaffold_101001.1 TreeBeST000558.a.j.d TreeBeST000558.a.j.d.d TreeBeST000558.a.j.d.d TreeBeST000558.a.j.d.d AT1G09575 Al_scaffold_0001_918 Carubv10009897m.g Aa_G516450.t1 TreeBeST000558.a.j.d.d.a Bo5g010000 Bra020011 TreeBeST000558.a.j.d.d.b Tp1g08180 Thhalv10008337m.g Th12028 Th26089 TreeBeST011184.K TreeBeST011184.K TreeBeST011184.K AT1G09440 fgenesh1_pm.C_scaffold_1000767 Carubv10009469m.g TreeBeST011184.K TreeBeST011184.K Thhalv10007579m.g Bra020024 Bra031665 Tp1g08050 Th12039 Th26099 evm.TU.supercontig_48.217 TreeBeST011226.I TreeBeST011226.I TreeBeST011226.I TreeBeST011226.I TreeBeST011226.I.a.b.b TreeBeST011226.I.a.b.b TreeBeST011226.I.a.b.b AT1G09550 fgenesh1_pm.C_scaffold_1000777 TreeBeST011226.I TCM_026854 POPTRDRAFT_240173 (POPTR_0013s00280) Bo5g009940 Bo5g009960 Bra020015 GLYMA03G38650 GLYMA19G41240 TreeBeST011226.K.b GLYMA10G28230 GLYMA20G22210 MTR_1g085070 PRUPE_ppb014879mg PRUPE_ppa006114mg VIT_14s0060g00230 AMTR_s00045p00148030 TreeBeST009561.C.b.b.b.b.b.a.a.a.b TreeBeST009561.C.b.b.b.b.b.a.a.a.b TreeBeST009561.C.b.b.b.b.b.a.a.a.b AT1G09665 Al_scaffold_0001_930 Aa_G161010.t1 Bo5g010080 Bra020002 TreeBeST009561.C.b.b.b.b.b.a.a.a.b Th12017 Carubv10011501m.g Aa_G160980.t1 Th12016 TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.a.b TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.a.b AT1G09510 fgenesh2_kg.1__1000__AT1G09510.1 Carubv10011960m.g TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.f TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.a.a.a.a scaffold_100985.1 Aa_G73570.t1 Aa_G73530.t1 TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.f TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.a.a.a.a Bo8g111140 Bra031666 TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.e.a.a.a.a TreeBeST010715.E.f.a.a.a.e.b.a.b.a.b.b.f Tp1g08090 Tp1g08110 Thhalv10008208m.g TreeBeST001652.B.d TreeBeST001652.B.d TreeBeST001652.B.d.f TreeBeST001652.B.d.f AT1G09620 fgenesh2_kg.1__1014__AT1G09620.1 Carubv10008148m.g Aa_G516390.t1 Bo5g010040 Bra020007 TreeBeST001652.B.d.d TreeBeST001652.B.d.c.a.a Bo8g111030 Bra031675 TreeBeST001652.B.d.d Tp1g08230 Thhalv10006633m.g Th12022 TreeBeST001482.G.c.b.b.a TreeBeST001482.G.c.b.b.a.c TreeBeST001482.G.c.b.b.a.c TreeBeST001482.G.c.b.b.a.c AT1G09640 fgenesh2_kg.1__1017__AT1G09640.1 Carubv10009284m.g Aa_G161040.t1 Bo5g010060 Bra020005 TreeBeST001482.G.c.b.b.a.c.a.a Bo8g111020 Bra031676 TreeBeST001482.G.c.b.b.a.c.b Tp1g08250 Thhalv10007759m.g Th12019 TreeBeST001482.G.d TreeBeST001482.G.d.d TreeBeST001482.G.d.d Carubv10010723m.g Aa_G161030.t1 TreeBeST001482.G.d.d Tp1g08260 Thhalv10009166m.g Th12018 TreeBeST004201.A TreeBeST004201.A.k TreeBeST004201.A.k AT1G09645 scaffold_101004.1 Bra020004 TreeBeST004201.A.k.b Bo8g111010 TreeBeST000189.A.d.b.a.b TreeBeST000189.A.d.b.a.b.e TreeBeST000189.A.d.b.a.b.e TreeBeST000189.A.d.b.a.b.e AT1G09580 fgenesh2_kg.1__1010__AT1G09580.1 Carubv10010159m.g Aa_G516420.t1 TreeBeST000189.A.d.b.a.b.e.a.a Bo5g010010 Bra020010 TreeBeST000189.A.d.b.a.b.e.b Tp1g08190 Thhalv10008686m.g Th12027 Th26088 TreeBeST011113.f.b.a TreeBeST011113.f.b.a TreeBeST011113.f.b.a TreeBeST011113.f.b.a TreeBeST011113.f.b.a TreeBeST011113.f.b.a TreeBeST011113.f.b.a.d TreeBeST011113.f.b.a.d.a TreeBeST011113.f.b.a.d.a TreeBeST011113.f.b.a.d.a GLP5 (AT1G09560) GLP5 (Al_scaffold_0001_916) Carubv10010233m.g Aa_G516470.t1 TreeBeST011113.f.b.a.d.a.a.a.a Bo5g009980 Bra020014 TreeBeST011113.f.b.a.d.a.a.b Bo8g111070 Bra031671 TreeBeST011113.f.b.a.d.a.b Tp1g08160 Thhalv10008725m.g TreeBeST011113.f.b.a Migut.B00905|Migut.B00905.1 Migut.N00982|Migut.N00982.1 Migut.N00983|Migut.N00983.1 Migut.N00984|Migut.N00984.1 TreeBeST011113.f.b.b.a.a TreeBeST011113.f.b.b.a.a evm.TU.supercontig_48.230 TreeBeST011113.f.b.b.a.a TCM_026861 Ciclev10029251m.g|Ciclev10029251m TreeBeST011113.f.b.b.a.a POPTRDRAFT_834434 (POPTR_0013s00240) TreeBeST011113.f.b.b.a.b.a GLYMA03G38630 GLYMA19G41070 GLYMA19G41220 TreeBeST011113.f.b.b.a.b.b.b GLYMA10G28020 GLYMA10G28190 GLYMA20G22180 chr5.CM0048.210.r2.m chr5.CM0048.420.r2.d MTR_1g085140 TreeBeST011113.f.b.b.a.b.a PRUPE_ppa011263mg mrna22950.1-v1.0-hybrid mrna22951.1-v1.0-hybrid VIT_14s0060g00120 TreeBeST011113.f.b.b.a.b.a AMTR_s00045p00155350 TreeBeST001705.E.b.a.b.b TreeBeST001705.E.b.a.b.b TreeBeST001705.E.b.a.b.b ACLA-3 (AT1G09430) ACLA-3 (fgenesh2_kg.1__990__AT1G09430.1) Carubv10009231m.g TreeBeST001705.E.b.a.b.b TreeBeST001705.E.b.a.b.b Tp1g08040 Thhalv10007711m.g Th12040 GSMUA_Achr8G06210_001 TreeBeST007758.G.a.b.c TreeBeST007758.G.a.b.c TreeBeST007758.G.a.b.c.a.b.b TreeBeST007758.G.a.b.c.a.b.b TreeBeST007758.G.a.b.c.a.b.b MYB61 (AT1G09540) MYB61 (scaffold_100991.1) Carubv10009497m.g TreeBeST007758.G.a.b.c.a.b.b Thhalv10008000m.g Th12033 Ciclev10028398m.g|Ciclev10028398m TreeBeST007758.G.a.b.d TreeBeST007758.G.a.b.d TreeBeST007758.G.a.b.d Aa_G73480.t1 Bo5g009920 Bra020016 TreeBeST007758.G.a.b.c.a.b.a Bo8g111090 Bra031669 Tp1g08140 Th26093 TreeBeST007758.G.a.b.d TCM_026853 TreeBeST007758.G.a.b.d.a POPTR_0013s00290 GLYMA03G38660 GLYMA19G41250 TreeBeST007758.G.a.b.d.a.b GLYMA10G28250 GLYMA20G22230 chr5.CM0048.130.r2.m chr5.CM0048.320.r2.d MTR_1g085040 PRUPE_ppa019718mg mrna22961.1-v1.0-hybrid VIT_14s0060g00240 TreeBeST007758.H Migut.N00977|Migut.N00977.1 TreeBeST007758.H.c PGSC0003DMG400015767 Solyc10g044680.1 AMTR_s00045p00146180 TreeBeST010717.D.a.a.a.b.b.a.b.a.g.a TreeBeST010717.D.a.a.a.b.b.a.b.a.g.a.d TreeBeST010717.D.a.a.a.b.b.a.b.a.g.a.d TreeBeST010717.D.a.a.a.b.b.a.b.a.g.a.d AT1G09460 Al_scaffold_0001_908 Carubv10009486m.g Bra020023 TreeBeST010717.D.a.a.a.b.b.a.b.a.g.a.d TreeBeST010717.D.a.a.a.b.b.a.b.a.g.a.d Tp1g08070 Thhalv10008261m.g Th12037 TreeBeST010717.D.a.a.a.b.b.a.b.a.g.b evm.TU.supercontig_48.219 GLYMA03G38770 evm.TU.supercontig_136.19