Reference Gene Name: KH2012:KH.C10.529 Ensembl
Reference Species : Cirobu
Root Species : 34_Deuterostomia (~10 million years) 		34_Deuterostomia Link Wikipedia to Cirobu Link Ensembl
×2 ÷2 Center the view on the reference gene Shift 1 gene on the left Shift 5 genes on the left Shift 1 gene on the right Shift 5 genes on the right Zoom out Show 1 less gene on each side Show 1 more gene on each side Show half the number of genes on each side Show twice more genes on each side Zoom in
Schematic scale
Genomic scale
dN/dS Ratio
Protein Similarity
CNE Track
34_Deuterostomia duplication node (click to collapse) 34_Deuterostomia (~10 My ago) Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to show this node (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) Click to show this node (15_Phlebobranchia) 15_Phlebobranchia duplication node (click to collapse) Click to show this node (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) Click to show this node (11_Ciona) 11_Ciona duplication node (click to collapse) Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_847 Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC10 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_44 Cisavi.CG.ENS81.R44.221656-231999 (ENSCSAVG00000004447) Cisavi.CG.ENS81.R44.236886-239405 (ENSCSAVG00000004611) Cisavi.CG.ENS81.R44.258539-262731 (ENSCSAVG00000004613) Cisavi.CG.ENS81.R44.268936-286413 (ENSCSAVG00000004617) Cisavi.CG.ENS81.R44.292631-300395 (ENSCSAVG00000004648) Cisavi.CG.ENS81.R44.301256-302364 (ENSCSAVG00000004771) Cisavi.CG.ENS81.R44.307499-308779 (ENSCSAVG00000004773) Cisavi.CG.ENS81.R44.308886-312816 (ENSCSAVG00000004776) Cisavi.CG.ENS81.R44.313911-315179 (ENSCSAVG00000004781) Cisavi.CG.ENS81.R44.356649-361869 (ENSCSAVG00000004782) Cisavi.CG.ENS81.R44.365994-368182 (ENSCSAVG00000004786) Cisavi.CG.ENS81.R44.373641-374853 (ENSCSAVG00000004789) Cisavi.CG.ENS81.R44.380618-382617 (ENSCSAVG00000004791) Cisavi.CG.ENS81.R44.395294-407049 (ENSCSAVG00000004794) Cisavi.CG.ENS81.R44.427208-428522 (ENSCSAVG00000004853) Cisavi.CG.ENS81.R44.462404-466244 (ENSCSAVG00000004904) Cisavi.CG.ENS81.R44.475330-490012 (ENSCSAVG00000004993) Cisavi.CG.ENS81.R44.493760-546413 (ENSCSAVG00000005019) Cisavi.CG.ENS81.R44.596345-627268 (ENSCSAVG00000005245) Cisavi.CG.ENS81.R44.634162-637692 (ENSCSAVG00000005366) Cisavi.CG.ENS81.R44.680784-696058 (ENSCSAVG00000005369) Cisavi.CG.ENS81.R44.713035-722618 (ENSCSAVG00000005788) Cisavi.CG.ENS81.R44.730059-734715 (ENSCSAVG00000006298) Cisavi.CG.ENS81.R44.735000-738466 (ENSCSAVG00000006303) Cisavi.CG.ENS81.R44.740441-762485 (ENSCSAVG00000006309) Cisavi.CG.ENS81.R44.753517-758240 (ENSCSAVG00000006325) Cisavi.CG.ENS81.R44.764285-765118 (ENSCSAVG00000006329) Cisavi.CG.ENS81.R44.774233-774717 (ENSCSAVG00000006338) Cisavi.CG.ENS81.R44.777804-779732 (ENSCSAVG00000006339) Click to show this node (11_Ciona) 11_Ciona duplication node (click to collapse) Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_1220 Click to hide this line (Cirobu) Cirobu duplication node (click to collapse) Cirobu Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC10 KH2012:KH.C10.614 KH2012:KH.C10.615 KH2012:KH.C10.212 KH2012:KH.C10.597 KH2012:KH.C10.91 KH2012:KH.C10.74 KH2012:KH.C10.213 KH2012:KH.C10.372 KH2012:KH.C10.367 KH2012:KH.C10.99 KH2012:KH.C10.216 KH2012:KH.C10.600 KH2012:KH.C10.10 KH2012:KH.C10.239 KH2012:KH.C10.204 KH2012:KH.C10.422 KH2012:KH.C10.84 KH2012:KH.C10.590 KH2012:KH.C10.150 KH2012:KH.C10.613 KH2012:KH.C10.131 KH2012:KH.C10.605 KH2012:KH.C10.130 KH2012:KH.C10.356 KH2012:KH.C10.162 KH2012:KH.C10.519 KH2012:KH.C10.193 KH2012:KH.C10.105 Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC10 KH2012:KH.C10.615 KH2012:KH.C10.212 KH2012:KH.C10.597 KH2012:KH.C10.91 KH2012:KH.C10.74 KH2012:KH.C10.213 KH2012:KH.C10.372 KH2012:KH.C10.367 KH2012:KH.C10.99 KH2012:KH.C10.216 KH2012:KH.C10.600 KH2012:KH.C10.10 KH2012:KH.C10.239 KH2012:KH.C10.204 KH2012:KH.C10.422 KH2012:KH.C10.84 KH2012:KH.C10.590 KH2012:KH.C10.150 KH2012:KH.C10.613 KH2012:KH.C10.131 KH2012:KH.C10.605 KH2012:KH.C10.130 KH2012:KH.C10.356 KH2012:KH.C10.162 KH2012:KH.C10.519 KH2012:KH.C10.193 KH2012:KH.C10.105 KH2012:KH.C10.581 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_37 Cisavi.CG.ENS81.R37.2811-7127 (ENSCSAVG00000001207) Cisavi.CG.ENS81.R37.961-6267 (ENSCSAVG00000001198) Cisavi.CG.ENS81.R37.10783-22364 (ENSCSAVG00000001210) Cisavi.CG.ENS81.R37.35046-37443 (ENSCSAVG00000001215) Cisavi.CG.ENS81.R37.57383-61504 (ENSCSAVG00000001216) Cisavi.CG.ENS81.R37.62339-64971 (ENSCSAVG00000001219) Cisavi.CG.ENS81.R37.65730-68598 (ENSCSAVG00000001220) Cisavi.CG.ENS81.R37.87187-88151 (ENSCSAVG00000001307) Cisavi.CG.ENS81.R37.109200-111023 (ENSCSAVG00000001309) Cisavi.CG.ENS81.R37.126811-129840 (ENSCSAVG00000001316) Cisavi.CG.ENS81.R37.131389-133949 (ENSCSAVG00000001320) Cisavi.CG.ENS81.R37.135407-136788 (ENSCSAVG00000001323) Cisavi.CG.ENS81.R37.154637-159219 (ENSCSAVG00000001345) Cisavi.CG.ENS81.R37.177934-186073 (ENSCSAVG00000001365) Cisavi.CG.ENS81.R37.191668-194269 (ENSCSAVG00000001372) Cisavi.CG.ENS81.R37.202866-203743 (ENSCSAVG00000001374) Cisavi.CG.ENS81.R37.204508-206002 (ENSCSAVG00000001375) Cisavi.CG.ENS81.R37.213856-215599 (ENSCSAVG00000001376) Cisavi.CG.ENS81.R37.220094-221275 (ENSCSAVG00000001411) Cisavi.CG.ENS81.R37.225415-231623 (ENSCSAVG00000001418) Cisavi.CG.ENS81.R37.255217-256450 (ENSCSAVG00000001458) Cisavi.CG.ENS81.R37.258454-262549 (ENSCSAVG00000001461) Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_1220 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_37 Cisavi.CG.ENS81.R37.2811-7127 (ENSCSAVG00000001207) Cisavi.CG.ENS81.R37.961-6267 (ENSCSAVG00000001198) Cisavi.CG.ENS81.R37.10783-22364 (ENSCSAVG00000001210) Cisavi.CG.ENS81.R37.35046-37443 (ENSCSAVG00000001215) Cisavi.CG.ENS81.R37.57383-61504 (ENSCSAVG00000001216) Cisavi.CG.ENS81.R37.62339-64971 (ENSCSAVG00000001219) Cisavi.CG.ENS81.R37.65730-68598 (ENSCSAVG00000001220) Cisavi.CG.ENS81.R37.87187-88151 (ENSCSAVG00000001307) Cisavi.CG.ENS81.R37.109200-111023 (ENSCSAVG00000001309) Cisavi.CG.ENS81.R37.126811-129840 (ENSCSAVG00000001316) Cisavi.CG.ENS81.R37.131389-133949 (ENSCSAVG00000001320) Cisavi.CG.ENS81.R37.135407-136788 (ENSCSAVG00000001323) Cisavi.CG.ENS81.R37.154637-159219 (ENSCSAVG00000001345) Cisavi.CG.ENS81.R37.177934-186073 (ENSCSAVG00000001365) Cisavi.CG.ENS81.R37.191668-194269 (ENSCSAVG00000001372) Cisavi.CG.ENS81.R37.202866-203743 (ENSCSAVG00000001374) Cisavi.CG.ENS81.R37.204508-206002 (ENSCSAVG00000001375) Cisavi.CG.ENS81.R37.213856-215599 (ENSCSAVG00000001376) Cisavi.CG.ENS81.R37.220094-221275 (ENSCSAVG00000001411) Cisavi.CG.ENS81.R37.225415-231623 (ENSCSAVG00000001418) Cisavi.CG.ENS81.R37.255217-256450 (ENSCSAVG00000001458) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC10 KH2012:KH.C10.212 KH2012:KH.C10.597 KH2012:KH.C10.91 KH2012:KH.C10.74 KH2012:KH.C10.213 KH2012:KH.C10.372 KH2012:KH.C10.367 KH2012:KH.C10.99 KH2012:KH.C10.216 KH2012:KH.C10.600 KH2012:KH.C10.10 KH2012:KH.C10.239 KH2012:KH.C10.204 KH2012:KH.C10.422 KH2012:KH.C10.84 KH2012:KH.C10.590 KH2012:KH.C10.150 KH2012:KH.C10.613 KH2012:KH.C10.131 KH2012:KH.C10.605 KH2012:KH.C10.130 KH2012:KH.C10.356 KH2012:KH.C10.162 KH2012:KH.C10.519 KH2012:KH.C10.193 KH2012:KH.C10.105 KH2012:KH.C10.581 KH2012:KH.C10.319 Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) Click to show this node (11_Ciona) 11_Ciona duplication node (click to collapse) Click to show this node (11_Ciona) 11_Ciona speciation node (click to collapse) Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_0 Cisavi.CG.ENS81.R0.1356882-1364630 (ENSCSAVG00000008718) Cisavi.CG.ENS81.R0.1365346-1371784 (ENSCSAVG00000008729) Cisavi.CG.ENS81.R0.1373521-1378209 (ENSCSAVG00000008814) Cisavi.CG.ENS81.R0.1384844-1389956 (ENSCSAVG00000008819) Cisavi.CG.ENS81.R0.1392212-1396284 (ENSCSAVG00000008824) Cisavi.CG.ENS81.R0.1418256-1420911 (ENSCSAVG00000008828) Cisavi.CG.ENS81.R0.1422069-1424297 (ENSCSAVG00000008829) Cisavi.CG.ENS81.R0.1424656-1426968 (ENSCSAVG00000008834) Cisavi.CG.ENS81.R0.1427272-1428929 (ENSCSAVG00000008839) Cisavi.CG.ENS81.R0.1447674-1449465 (ENSCSAVG00000008846) Cisavi.CG.ENS81.R0.1452131-1454834 (ENSCSAVG00000008847) Cisavi.CG.ENS81.R0.1464500-1467291 (ENSCSAVG00000008851) Cisavi.CG.ENS81.R0.1469043-1471875 (ENSCSAVG00000008887) Cisavi.CG.ENS81.R0.1480498-1489079 (ENSCSAVG00000008889) Cisavi.CG.ENS81.R0.1502141-1504880 (ENSCSAVG00000008892) Cisavi.CG.ENS81.R0.1521824-1522626 (ENSCSAVG00000008908) Cisavi.CG.ENS81.R0.1527340-1551859 (ENSCSAVG00000008910) Cisavi.CG.ENS81.R0.1645747-1662899 (ENSCSAVG00000008916) Cisavi.CG.ENS81.R0.1663547-1665481 (ENSCSAVG00000009006) Cisavi.CG.ENS81.R0.1665097-1665481 (ENSCSAVG00000009009) Cisavi.CG.ENS81.R0.1667459-1675427 (ENSCSAVG00000009010) Cisavi.CG.ENS81.R0.1681130-1688442 (ENSCSAVG00000009055) Cisavi.CG.ENS81.R0.1689792-1701466 (ENSCSAVG00000009082) Cisavi.CG.ENS81.R0.1706014-1723939 (ENSCSAVG00000009089) Cisavi.CG.ENS81.R0.1725660-1726552 (ENSCSAVG00000009114) Cisavi.CG.ENS81.R0.1735211-1739043 (ENSCSAVG00000009117) Cisavi.CG.ENS81.R0.1753446-1759224 (ENSCSAVG00000009120) Cisavi.CG.ENS81.R0.1761235-1766948 (ENSCSAVG00000009130) Cisavi.CG.ENS81.R0.1767598-1777356 (ENSCSAVG00000009138) Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_24 Fam008345 Fam010182 Fam012668.a.a.b Fam003666.b.a.a.b Fam004089 Fam012790.A Fam005885.b.a Fam002349.N Fam001792.C Fam008757.b Fam010226 Fam001921.T Fam006049.b.b.a Fam002527.E.a Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC10 KH2012:KH.C10.332 KH2012:KH.C10.141 KH2012:KH.C10.238 KH2012:KH.C10.322 KH2012:KH.C10.622 KH2012:KH.C10.5 KH2012:KH.C10.470 KH2012:KH.C10.544 KH2012:KH.C10.308 KH2012:KH.C10.385 KH2012:KH.C10.609 KH2012:KH.C10.174 KH2012:KH.C10.439 KH2012:KH.C10.20 KH2012:KH.C10.24 KH2012:KH.C10.157 KH2012:KH.C10.282 KH2012:KH.C10.589 KH2012:KH.C10.491 KH2012:KH.C10.158 KH2012:KH.C10.42 KH2012:KH.C10.281 KH2012:KH.C10.616 KH2012:KH.C10.389 KH2012:KH.C10.373 KH2012:KH.C10.307 KH2012:KH.C10.521 KH2012:KH.C10.111 KH2012:KH.C10.430 KH2012:KH.C10.481 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_0 Cisavi.CG.ENS81.R0.1365346-1371784 (ENSCSAVG00000008729) Cisavi.CG.ENS81.R0.1373521-1378209 (ENSCSAVG00000008814) Cisavi.CG.ENS81.R0.1384844-1389956 (ENSCSAVG00000008819) Cisavi.CG.ENS81.R0.1392212-1396284 (ENSCSAVG00000008824) Cisavi.CG.ENS81.R0.1418256-1420911 (ENSCSAVG00000008828) Cisavi.CG.ENS81.R0.1422069-1424297 (ENSCSAVG00000008829) Cisavi.CG.ENS81.R0.1424656-1426968 (ENSCSAVG00000008834) Cisavi.CG.ENS81.R0.1427272-1428929 (ENSCSAVG00000008839) Cisavi.CG.ENS81.R0.1447674-1449465 (ENSCSAVG00000008846) Cisavi.CG.ENS81.R0.1452131-1454834 (ENSCSAVG00000008847) Cisavi.CG.ENS81.R0.1464500-1467291 (ENSCSAVG00000008851) Cisavi.CG.ENS81.R0.1469043-1471875 (ENSCSAVG00000008887) Cisavi.CG.ENS81.R0.1480498-1489079 (ENSCSAVG00000008889) Cisavi.CG.ENS81.R0.1502141-1504880 (ENSCSAVG00000008892) Cisavi.CG.ENS81.R0.1521824-1522626 (ENSCSAVG00000008908) Cisavi.CG.ENS81.R0.1527340-1551859 (ENSCSAVG00000008910) Cisavi.CG.ENS81.R0.1645747-1662899 (ENSCSAVG00000008916) Cisavi.CG.ENS81.R0.1663547-1665481 (ENSCSAVG00000009006) Cisavi.CG.ENS81.R0.1665097-1665481 (ENSCSAVG00000009009) Cisavi.CG.ENS81.R0.1667459-1675427 (ENSCSAVG00000009010) Cisavi.CG.ENS81.R0.1681130-1688442 (ENSCSAVG00000009055) Cisavi.CG.ENS81.R0.1689792-1701466 (ENSCSAVG00000009082) Cisavi.CG.ENS81.R0.1706014-1723939 (ENSCSAVG00000009089) Cisavi.CG.ENS81.R0.1725660-1726552 (ENSCSAVG00000009114) Cisavi.CG.ENS81.R0.1735211-1739043 (ENSCSAVG00000009117) Cisavi.CG.ENS81.R0.1753446-1759224 (ENSCSAVG00000009120) Cisavi.CG.ENS81.R0.1761235-1766948 (ENSCSAVG00000009130) Cisavi.CG.ENS81.R0.1767598-1777356 (ENSCSAVG00000009138) Cisavi.CG.ENS81.R0.1780618-1787271 (ENSCSAVG00000009141) Click to hide this line (14_Phallusia) 14_Phallusia speciation node (click to collapse) 14_Phallusia (~10 My ago) Click to hide this line (Phfumi) Phfumi terminal node Phfumi - Chr:S1437 Phfumi.CG.MTP2014.S1437.g03710 Click to show this node (Phmamm) Phmamm duplication node (click to collapse) Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S919 Phmamm.CG.MTP2014.S919.g12777 Phmamm.CG.MTP2014.S919.g12778 Phmamm.CG.MTP2014.S919.g12779 Phmamm.CG.MTP2014.S919.g12780 Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S1806 Phmamm.CG.MTP2014.S1806.g15683 Phmamm.CG.MTP2014.S1806.g15684 Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to hide this line (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) 16_Ascidiacea (~10 My ago) - block_676 Fam001165 Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to hide this line (7) 7 speciation node (click to collapse) 7 (~10 My ago) - block_677 Fam001165 Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chr6 Boschl.CG.Botznik2013.chr6.g54659 Boschl.CG.Botznik2013.chr6.g54719 Boschl.CG.Botznik2013.chr6.g54720 Boschl.CG.Botznik2013.chr6.g54738 Boschl.CG.Botznik2013.chr6.g54849 Boschl.CG.Botznik2013.chr6.g54881 Boschl.CG.Botznik2013.chr6.g54887 Boschl.CG.Botznik2013.chr6.g54895 Boschl.CG.Botznik2013.chr6.g54897 Boschl.CG.Botznik2013.chr6.g54933 Boschl.CG.Botznik2013.chr6.g54996 Boschl.CG.Botznik2013.chr6.g54997 Boschl.CG.Botznik2013.chr6.g55008 Boschl.CG.Botznik2013.chr6.g55021 Boschl.CG.Botznik2013.chr6.g55022 Boschl.CG.Botznik2013.chr6.g55080 Boschl.CG.Botznik2013.chr6.g55081 Boschl.CG.Botznik2013.chr6.g55082 Boschl.CG.Botznik2013.chr6.g55085 Boschl.CG.Botznik2013.chr6.g55087 Boschl.CG.Botznik2013.chr6.g55088 Boschl.CG.Botznik2013.chr6.g55107 Boschl.CG.Botznik2013.chr6.g55108 Boschl.CG.Botznik2013.chr6.g55118 Boschl.CG.Botznik2013.chr6.g55119 Boschl.CG.Botznik2013.chr6.g55120 Boschl.CG.Botznik2013.chr6.g55124 Boschl.CG.Botznik2013.chr6.g55179 Boschl.CG.Botznik2013.chr6.g55195 Boschl.CG.Botznik2013.chr6.g55197 Click to show this node (6_Halocynthia) 6_Halocynthia duplication node (click to collapse) Click to show this node (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) Click to hide this line (Harore) Harore terminal node Harore - Chr:S101 Harore.CG.MTP2014.S101.g06081 Harore.CG.MTP2014.S101.g02809 Harore.CG.MTP2014.S101.g15453 Harore.CG.MTP2014.S101.g06311 Harore.CG.MTP2014.S101.g07366 Harore.CG.MTP2014.S101.g03042 Harore.CG.MTP2014.S101.g09581 Harore.CG.MTP2014.S101.g04413 Harore.CG.MTP2014.S101.g03446 Harore.CG.MTP2014.S101.g00793 Harore.CG.MTP2014.S101.g06044 Harore.CG.MTP2014.S101.g12280 Harore.CG.MTP2014.S101.g11714 Harore.CG.MTP2014.S101.g03985 Harore.CG.MTP2014.S101.g04676 Harore.CG.MTP2014.S101.g06209 Harore.CG.MTP2014.S101.g04882 Harore.CG.MTP2014.S101.g04428 Harore.CG.MTP2014.S101.g12870 Harore.CG.MTP2014.S101.g09708 Harore.CG.MTP2014.S101.g04847 Harore.CG.MTP2014.S101.g03572 Harore.CG.MTP2014.S101.g12032 Harore.CG.MTP2014.S101.g11954 Harore.CG.MTP2014.S101.g13472 Harore.CG.MTP2014.S101.g10180 Harore.CG.MTP2014.S101.g04197 Harore.CG.MTP2014.S101.g05478 Harore.CG.MTP2014.S101.g15686 Click to hide this line (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) 6_Halocynthia (~10 My ago) - block_956 Fam001165 Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S728 Haaura.CG.MTP2014.S728.g06429 Haaura.CG.MTP2014.S728.g06430 Haaura.CG.MTP2014.S728.g06431 Haaura.CG.MTP2014.S728.g06432 Click to hide this line (Harore) Harore terminal node Harore - Chr:S2416 Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) - block_78 Fam010579.a.a.a Fam008500 Fam004045.A Fam001165 Click to show this node (11_Ciona) 11_Ciona speciation node (click to collapse) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhL16 KH2012:KH.L16.1 KH2012:KH.L16.3 Click to hide this line (14_Phallusia) 14_Phallusia speciation node (click to collapse) 14_Phallusia (~10 My ago) - block_96 Fam010579.a.a.a.e Fam008500 Fam004045.A Fam001165 Fam008590 Click to hide this line (Phfumi) Phfumi terminal node Phfumi - Chr:S1896 Phfumi.CG.MTP2014.S1896.g04259 Phfumi.CG.MTP2014.S1896.g04261 Phfumi.CG.MTP2014.S1896.g04262 Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S624 Phmamm.CG.MTP2014.S624.g10668 Phmamm.CG.MTP2014.S624.g10669 Phmamm.CG.MTP2014.S624.g10670 Phmamm.CG.MTP2014.S624.g10671 Phmamm.CG.MTP2014.S624.g10672 Phmamm.CG.MTP2014.S624.g10674 Phmamm.CG.MTP2014.S624.g10675 Phmamm.CG.MTP2014.S624.g10676 Phmamm.CG.MTP2014.S624.g10677 Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to show this node (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) Click to show this node (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_1063 Cisavi.CG.ENS81.R1063.10239-20421 (ENSCSAVG00000003712) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC1 KH2012:KH.C1.650 KH2012:KH.C1.86 KH2012:KH.C1.757 KH2012:KH.C1.1151 KH2012:KH.C1.296 KH2012:KH.C1.400 KH2012:KH.C1.1041 KH2012:KH.C1.786 KH2012:KH.C1.1004 KH2012:KH.C1.1037 KH2012:KH.C1.995 KH2012:KH.C1.324 KH2012:KH.C1.205 KH2012:KH.C1.845 KH2012:KH.C1.1002 KH2012:KH.C1.21 KH2012:KH.C1.160 KH2012:KH.C1.604 KH2012:KH.C1.219 KH2012:KH.C1.415 KH2012:KH.C1.534 KH2012:KH.C1.472 KH2012:KH.C1.115 KH2012:KH.C1.837 KH2012:KH.C1.751 KH2012:KH.C1.1125 KH2012:KH.C1.267 KH2012:KH.C1.968 KH2012:KH.C1.118 KH2012:KH.C1.678 Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to hide this line (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) 34_Deuterostomia (~10 My ago) Click to hide this line (30_Chordata) 30_Chordata speciation node (click to collapse) 30_Chordata (~10 My ago) Click to hide this line (28) 28 speciation node (click to collapse) 28 (~10 My ago) Click to show this node (26_Sarcopterygii) 26_Sarcopterygii duplication node (click to collapse) Click to show this node (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) Click to hide this line (25_Amniota) 25_Amniota speciation node (click to collapse) 25_Amniota (~10 My ago) - block_15 Fam002923.A.b.a.a Fam007603.a.a.b.a.a Fam001198.b.b Fam001808.B.b.a Fam012079.a Fam005216.b.a.a Fam003062.B Fam004620.a Fam001917.U.a Fam011146.a.a.a Fam011146.a.a.b Fam009580 Fam006992.b.a.a.b.b Fam005455.a.b.a.b Fam005499.a.a Fam002370.T.a.b Fam006789 Fam004317.a Fam001922.D.a.b Fam002453.H.b.a.a Fam003035.C.b.a.a Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) - block_14 Fam001808.D.b Fam002696.A.a Fam002453.H.b.a.a Fam001922.D.a.b Fam004317.a Fam006789 Fam002370.T.a.b Fam005499.a.a Fam005455.a.b.a.b Fam006992.b.a.a.a Fam009580 Fam011146.a.a.a Fam001917.U.a Fam004620.a Fam003062.B Fam005216.b.a.a Fam012079.a Fam001808.B.b.a Fam002310.U.b.b Fam005203.A.a Fam005205.a Fam005210.b.b.a Fam002857.B.a Fam001695.I.a Fam007802 Fam002263.D.b Fam001885.H.a.b Fam004803 Fam002362.ED.b.a.d.d.b.b Fam007391.d Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:3 ENSG00000016864 ENSG00000114902 ENSG00000114904 ENSG00000055957 ENSG00000162267 ENSG00000055955 ENSG00000272573 ENSG00000248592 ENSG00000213533 ENSG00000163935 ENSG00000163933 ENSG00000163932 ENSG00000163931 ENSG00000272886 ENSG00000157388 ENSG00000056736 ENSG00000113812 ENSG00000113811 ENSG00000157445 ENSG00000144771 ENSG00000114251 ENSG00000187672 ENSG00000180376 ENSG00000163946 ENSG00000163947 ENSG00000186451 ENSG00000144730 ENSG00000163666 ENSG00000157500 ENSG00000239388 Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:14 ENSMUSG00000021879 ENSMUSG00000021898 ENSMUSG00000040760 ENSMUSG00000040726 ENSMUSG00000040717 ENSMUSG00000021895 ENSMUSG00000040651 ENSMUSG00000046753 ENSMUSG00000040640 ENSMUSG00000021994 ENSMUSG00000021991 ENSMUSG00000045776 ENSMUSG00000042682 ENSMUSG00000015971 ENSMUSG00000015966 ENSMUSG00000015968 ENSMUSG00000021962 ENSMUSG00000021957 ENSMUSG00000021948 ENSMUSG00000052395 ENSMUSG00000006527 ENSMUSG00000006526 ENSMUSG00000042485 ENSMUSG00000021922 ENSMUSG00000006522 ENSMUSG00000006529 ENSMUSG00000021918 ENSMUSG00000021917 ENSMUSG00000021916 ENSMUSG00000042354 Click to hide this line (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) 21_Archelosauria (~10 My ago) - block_50 Fam003503.A Fam001741.F.b.b Fam002453.H.b.a.a Fam001922.D.a.b Fam004317.a Fam006789 Fam002370.T.a.b Fam005499.a.a Fam005455.a.b.a.b Fam006992.b.a.a.b.b Fam009580 Fam011146.a.a.a Fam001917.U.a Fam004620.a Fam003062.B Fam005216.b.a.a Fam012079.a Fam001808.B.b.a Fam001198.b.b Fam007603.a.a.b.a.a Fam002923.A.b.a.a Click to hide this line (Psin) Psin terminal node Psin - Chr:JH210532.1 ENSPSIG00000003173 ENSPSIG00000003181 ENSPSIG00000003189 ENSPSIG00000003212 ENSPSIG00000000912 ENSPSIG00000003217 ENSPSIG00000003222 ENSPSIG00000003224 ENSPSIG00000003227 ENSPSIG00000003230 ENSPSIG00000003233 ENSPSIG00000003261 ENSPSIG00000003277 ENSPSIG00000003282 ENSPSIG00000003300 ENSPSIG00000003360 ENSPSIG00000003369 ENSPSIG00000003371 ENSPSIG00000003372 ENSPSIG00000003394 ENSPSIG00000003397 ENSPSIG00000000930 Click to hide this line (Ggal) Ggal terminal node Ggal - Chr:12 ENSGALG00000005120 ENSGALG00000005123 ENSGALG00000005128 ENSGALG00000005131 ENSGALG00000005161 ENSGALG00000005177 ENSGALG00000005210 ENSGALG00000026891 ENSGALG00000026154 ENSGALG00000025886 ENSGALG00000005237 ENSGALG00000005249 ENSGALG00000005309 ENSGALG00000005322 ENSGALG00000005332 ENSGALG00000005385 ENSGALG00000005391 ENSGALG00000005400 ENSGALG00000005404 ENSGALG00000005410 ENSGALG00000005419 ENSGALG00000005450 ENSGALG00000005459 ENSGALG00000005481 ENSGALG00000005499 ENSGALG00000005506 ENSGALG00000005527 ENSGALG00000005537 ENSGALG00000005601 ENSGALG00000005620 Click to show this node (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) Click to show this node (Lcha) Lcha duplication node (click to collapse) Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH126708.1 ENSLACG00000000538 ENSLACG00000004149 ENSLACG00000010248 ENSLACG00000010384 ENSLACG00000010755 ENSLACG00000011368 ENSLACG00000013895 ENSLACG00000014187 ENSLACG00000014858 ENSLACG00000015469 ENSLACG00000016003 ENSLACG00000022471 ENSLACG00000016397 ENSLACG00000016609 ENSLACG00000016781 ENSLACG00000017523 ENSLACG00000017643 Click to hide this line (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) 16_Ascidiacea (~10 My ago) Click to show this node (8_Stolidobranchia) 8_Stolidobranchia duplication node (click to collapse) Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to show this node (7) 7 speciation node (click to collapse) Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chr1 Boschl.CG.Botznik2013.chr1.g11408 Boschl.CG.Botznik2013.chr1.g11591 Boschl.CG.Botznik2013.chr1.g11658 Boschl.CG.Botznik2013.chr1.g11716 Boschl.CG.Botznik2013.chr1.g11717 Boschl.CG.Botznik2013.chr1.g11918 Boschl.CG.Botznik2013.chr1.g11919 Boschl.CG.Botznik2013.chr1.g11920 Boschl.CG.Botznik2013.chr1.g12327 Boschl.CG.Botznik2013.chr1.g12617 Boschl.CG.Botznik2013.chr1.g12618 Boschl.CG.Botznik2013.chr1.g12660 Boschl.CG.Botznik2013.chr1.g12696 Boschl.CG.Botznik2013.chr1.g12823 Boschl.CG.Botznik2013.chr1.g12824 Boschl.CG.Botznik2013.chr1.g13354 Boschl.CG.Botznik2013.chr1.g13694 Boschl.CG.Botznik2013.chr1.g13695 Boschl.CG.Botznik2013.chr1.g13851 Boschl.CG.Botznik2013.chr1.g13852 Boschl.CG.Botznik2013.chr1.g13933 Boschl.CG.Botznik2013.chr1.g13934 Boschl.CG.Botznik2013.chr1.g13969 Boschl.CG.Botznik2013.chr1.g13970 Boschl.CG.Botznik2013.chr1.g14184 Boschl.CG.Botznik2013.chr1.g14185 Boschl.CG.Botznik2013.chr1.g14311 Boschl.CG.Botznik2013.chr1.g14316 Boschl.CG.Botznik2013.chr1.g14341 Boschl.CG.Botznik2013.chr1.g14362 Click to hide this line (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) 8_Stolidobranchia (~10 My ago) Click to show this node (7) 7 speciation node (click to collapse) Click to hide this line (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) 6_Halocynthia (~10 My ago) - block_145 Fam003741.d Fam008548 Fam005427 Fam007595.b.a.a Fam001950.C Fam002157.G Fam006663.b Fam006452.b.e.a Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S144 Haaura.CG.MTP2014.S144.g02629 Haaura.CG.MTP2014.S144.g02630 Haaura.CG.MTP2014.S144.g02632 Haaura.CG.MTP2014.S144.g02633 Haaura.CG.MTP2014.S144.g02634 Haaura.CG.MTP2014.S144.g02635 Haaura.CG.MTP2014.S144.g02636 Haaura.CG.MTP2014.S144.g02637 Haaura.CG.MTP2014.S144.g02638 Haaura.CG.MTP2014.S144.g02639 Haaura.CG.MTP2014.S144.g02640 Haaura.CG.MTP2014.S144.g02641 Haaura.CG.MTP2014.S144.g02642 Haaura.CG.MTP2014.S144.g02643 Click to hide this line (Harore) Harore terminal node Harore - Chr:S99 Harore.CG.MTP2014.S99.g01162 Harore.CG.MTP2014.S99.g07349 Harore.CG.MTP2014.S99.g02590 Harore.CG.MTP2014.S99.g11098 Harore.CG.MTP2014.S99.g02929 Harore.CG.MTP2014.S99.g06757 Harore.CG.MTP2014.S99.g11643 Harore.CG.MTP2014.S99.g11022 Harore.CG.MTP2014.S99.g09028 Harore.CG.MTP2014.S99.g05779 Harore.CG.MTP2014.S99.g06126 Harore.CG.MTP2014.S99.g01206 Harore.CG.MTP2014.S99.g12272 Harore.CG.MTP2014.S99.g01173 Harore.CG.MTP2014.S99.g06170 Harore.CG.MTP2014.S99.g02455 Harore.CG.MTP2014.S99.g04215 Harore.CG.MTP2014.S99.g14526 Harore.CG.MTP2014.S99.g00520 Harore.CG.MTP2014.S99.g13071 Harore.CG.MTP2014.S99.g07547 Harore.CG.MTP2014.S99.g14563 Harore.CG.MTP2014.S99.g12173 Harore.CG.MTP2014.S99.g14810 Harore.CG.MTP2014.S99.g07608 Harore.CG.MTP2014.S99.g12528 Harore.CG.MTP2014.S99.g10571 Harore.CG.MTP2014.S99.g16073 Harore.CG.MTP2014.S99.g10647 Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) Click to show this node (Moocul) Moocul duplication node (click to collapse) Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S76988 Moocul.CG.ELv1_2.S76988.g05470 Moocul.CG.ELv1_2.S76988.g05471 Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S32427 Moocul.CG.ELv1_2.S32427.g01583 Moocul.CG.ELv1_2.S32427.g01584 Moocul.CG.ELv1_2.S32427.g01585 Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S497999 Moocci.CG.ELv1_2.S497999.g18910 Moocci.CG.ELv1_2.S497999.g18911 Moocci.CG.ELv1_2.S497999.g18912 Moocci.CG.ELv1_2.S497999.g18913 Moocci.CG.ELv1_2.S497999.g18914 Moocci.CG.ELv1_2.S497999.g18915 Moocci.CG.ELv1_2.S497999.g18916 Moocci.CG.ELv1_2.S497999.g18917 Moocci.CG.ELv1_2.S497999.g18918 Moocci.CG.ELv1_2.S497999.g18920 Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) - block_58 Fam008715 Fam005828 Fam001878.H.b Fam006900.d Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_265 Fam000431.d Fam008715 Fam005828 Fam001878.H.b Fam006900.d Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhL18 KH2012:KH.L18.46 KH2012:KH.L18.136 KH2012:KH.L18.128 KH2012:KH.L18.132 KH2012:KH.L18.130 KH2012:KH.L18.20 KH2012:KH.L18.124 KH2012:KH.L18.129 KH2012:KH.L18.103 KH2012:KH.L18.82 KH2012:KH.L18.32 KH2012:KH.L18.85 KH2012:KH.L18.97 KH2012:KH.L18.81 KH2012:KH.L18.94 KH2012:KH.L18.6 KH2012:KH.L18.91 KH2012:KH.L18.109 KH2012:KH.L18.121 KH2012:KH.L18.10 KH2012:KH.L18.15 KH2012:KH.L18.21 KH2012:KH.L18.73 KH2012:KH.L18.2 KH2012:KH.L18.51 KH2012:KH.L18.87 KH2012:KH.L18.80 KH2012:KH.L18.100 KH2012:KH.L18.59 KH2012:KH.L18.37 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_173 Cisavi.CG.ENS81.R173.295550-297621 (ENSCSAVG00000007600) Cisavi.CG.ENS81.R173.298940-307289 (ENSCSAVG00000007605) Cisavi.CG.ENS81.R173.301326-301980 (ENSCSAVG00000007608) Cisavi.CG.ENS81.R173.308665-312917 (ENSCSAVG00000007611) Cisavi.CG.ENS81.R173.313180-314094 (ENSCSAVG00000007614) Cisavi.CG.ENS81.R173.324182-325512 (ENSCSAVG00000007617) Cisavi.CG.ENS81.R173.336585-337976 (ENSCSAVG00000007621) Cisavi.CG.ENS81.R173.341975-356407 (ENSCSAVG00000007622) Cisavi.CG.ENS81.R173.371774-374688 (ENSCSAVG00000007651) Cisavi.CG.ENS81.R173.374772-375437 (ENSCSAVG00000007657) Cisavi.CG.ENS81.R173.378466-379865 (ENSCSAVG00000007658) Cisavi.CG.ENS81.R173.386840-388073 (ENSCSAVG00000007661) Cisavi.CG.ENS81.R173.390395-392182 (ENSCSAVG00000007667) Cisavi.CG.ENS81.R173.395979-401509 (ENSCSAVG00000007695) Cisavi.CG.ENS81.R173.402987-407965 (ENSCSAVG00000007890) Cisavi.CG.ENS81.R173.428610-431323 (ENSCSAVG00000008126) Cisavi.CG.ENS81.R173.432096-432901 (ENSCSAVG00000008129) Click to hide this line (14_Phallusia) 14_Phallusia speciation node (click to collapse) 14_Phallusia (~10 My ago) - block_62 Fam000431.d Fam004018.b Fam006900.d Fam001878.H.b Fam005828 Fam008715 Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S551 Phmamm.CG.MTP2014.S551.g09974 Phmamm.CG.MTP2014.S551.g09975 Phmamm.CG.MTP2014.S551.g09976 Phmamm.CG.MTP2014.S551.g09977 Phmamm.CG.MTP2014.S551.g09979 Phmamm.CG.MTP2014.S551.g09980 Phmamm.CG.MTP2014.S551.g09981 Phmamm.CG.MTP2014.S551.g09982 Phmamm.CG.MTP2014.S551.g09983 Phmamm.CG.MTP2014.S551.g09984 Phmamm.CG.MTP2014.S551.g09985 Phmamm.CG.MTP2014.S551.g09986 Phmamm.CG.MTP2014.S551.g09987 Phmamm.CG.MTP2014.S551.g09988 Click to hide this line (Phfumi) Phfumi terminal node Phfumi - Chr:S89 Phfumi.CG.MTP2014.S89.g00916 Phfumi.CG.MTP2014.S89.g00917 Phfumi.CG.MTP2014.S89.g00918 Phfumi.CG.MTP2014.S89.g00919 Phfumi.CG.MTP2014.S89.g00921 Phfumi.CG.MTP2014.S89.g00922 Phfumi.CG.MTP2014.S89.g00923 Phfumi.CG.MTP2014.S89.g00924 Click to show this node (Bbel) Bbel duplication node (click to collapse) Click to hide this line (Bbel) Bbel terminal node Bbel - scaffold51 220990R 221000F 221010R 221020F 221030R 221040R 221050R 221060R 221070F 221080F 221090R 221100F 221110R 221120F 221130F 221160R 221170F 221180F 221190R 221200F 221210R 221220R 221230F 221240R 221250F 221260F 221270F 221280F Click to show this node (Bbel) Bbel duplication node (click to collapse) Click to hide this line (Bbel) Bbel terminal node Bbel - scaffold17 077390F 077400R 077410R 077420R 077430F 077440R 077450R 077460R 077470F 077480R 077490F 077500R 077510F 077520R 077530F 077550R 077560F 077570R 077580R 077590F 077600F 077610R 077620F 077630F 077640F 077650F 077660F 077670F 077680F 077690F Click to hide this line (Bbel) Bbel terminal node Bbel - scaffold51 221000F 221010R 221020F 221030R 221040R 221050R 221060R 221070F 221080F 221090R 221100F 221110R 221120F 221130F 221160R 221170F 221180F 221190R 221200F 221210R 221220R 221230F 221240R 221250F 221260F 221270F 221280F Click to show this node (33) 33 speciation node (click to collapse) Click to hide this line (Skow) Skow terminal node Skow - scaffold_253 Sakowv30012904m.g Sakowv30012903m.g Sakowv30012938m.g Sakowv30012900m.g Sakowv30012914m.g Sakowv30012891m.g Sakowv30012937m.g Sakowv30012908m.g Sakowv30012906m.g Sakowv30012920m.g Sakowv30012907m.g Sakowv30012905m.g Sakowv30012930m.g Sakowv30012916m.g Sakowv30012911m.g Sakowv30012910m.g Sakowv30012936m.g Sakowv30012939m.g Sakowv30012935m.g Sakowv30012895m.g Sakowv30012927m.g Sakowv30012919m.g Sakowv30012940m.g Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (33) 33 speciation node (click to collapse) Click to show this node (Spur) Spur duplication node (click to collapse) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold805 SPU_005362 SPU_001803 SPU_020325 SPU_022687 SPU_001616 SPU_028234 SPU_028235 SPU_014133 Click to show this node (Spur) Spur duplication node (click to collapse) Click to show this node (Spur) Spur duplication node (click to collapse) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold2051 SPU_021436 SPU_021432 SPU_021437 SPU_021438 SPU_022012 Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold805 SPU_005362 SPU_001803 SPU_020325 SPU_022687 SPU_001616 SPU_028234 SPU_028235 SPU_014133 Click to show this node (Spur) Spur duplication node (click to collapse) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold805 SPU_005362 SPU_001803 SPU_020325 SPU_022687 SPU_001616 SPU_028234 SPU_028235 SPU_014133 Click to show this node (Spur) Spur duplication node (click to collapse) Click to show this node (Spur) Spur duplication node (click to collapse) Click to show this node (Spur) Spur duplication node (click to collapse) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold2051 SPU_021436 SPU_021432 SPU_021437 SPU_021438 SPU_022012 Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold2051 SPU_021436 SPU_021432 SPU_021437 SPU_021438 SPU_022012 Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold2051 SPU_021436 SPU_021432 SPU_021437 SPU_021438 SPU_022012 Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold2051 SPU_021436 SPU_021432 SPU_021437 SPU_021438 SPU_022012 Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (33) 33 speciation node (click to collapse) Click to show this node (Skow) Skow duplication node (click to collapse) Click to hide this line (Skow) Skow terminal node Skow - scaffold_71 Sakowv30026350m.g Sakowv30026345m.g Sakowv30026410m.g Sakowv30026398m.g Sakowv30026408m.g Sakowv30026403m.g Sakowv30026358m.g Sakowv30026396m.g Sakowv30026402m.g Sakowv30026406m.g Sakowv30026342m.g Sakowv30026322m.g Sakowv30026382m.g Sakowv30026394m.g Sakowv30026388m.g Sakowv30026413m.g Sakowv30026332m.g Sakowv30026397m.g Sakowv30026319m.g Sakowv30026323m.g Sakowv30026327m.g Sakowv30026324m.g Sakowv30026320m.g Sakowv30026362m.g Sakowv30026387m.g Sakowv30026338m.g Sakowv30026333m.g Sakowv30026395m.g Sakowv30026343m.g Sakowv30026340m.g Click to hide this line (Skow) Skow terminal node Skow - scaffold_349 Sakowv30010890m.g Sakowv30010925m.g Sakowv30010911m.g Sakowv30010927m.g Sakowv30010914m.g Sakowv30010921m.g Sakowv30010924m.g Sakowv30010917m.g Sakowv30010913m.g Sakowv30010916m.g Sakowv30010923m.g Sakowv30010922m.g Sakowv30010929m.g Sakowv30010912m.g Sakowv30010918m.g Sakowv30010920m.g Sakowv30010907m.g Sakowv30010926m.g Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to show this node (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to show this node (7) 7 duplication node (click to collapse) Click to show this node (7) 7 speciation node (click to collapse) Click to show this node (Boschl) Boschl duplication node (click to collapse) Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chr7 Boschl.CG.Botznik2013.chr7.g45758 Boschl.CG.Botznik2013.chr7.g45759 Boschl.CG.Botznik2013.chr7.g45773 Boschl.CG.Botznik2013.chr7.g45791 Boschl.CG.Botznik2013.chr7.g45793 Boschl.CG.Botznik2013.chr7.g45804 Boschl.CG.Botznik2013.chr7.g45811 Boschl.CG.Botznik2013.chr7.g45852 Boschl.CG.Botznik2013.chr7.g45888 Boschl.CG.Botznik2013.chr7.g45931 Boschl.CG.Botznik2013.chr7.g45999 Boschl.CG.Botznik2013.chr7.g46003 Boschl.CG.Botznik2013.chr7.g46015 Boschl.CG.Botznik2013.chr7.g46016 Boschl.CG.Botznik2013.chr7.g46042 Boschl.CG.Botznik2013.chr7.g46046 Boschl.CG.Botznik2013.chr7.g46067 Boschl.CG.Botznik2013.chr7.g46068 Boschl.CG.Botznik2013.chr7.g46069 Boschl.CG.Botznik2013.chr7.g46070 Boschl.CG.Botznik2013.chr7.g46071 Boschl.CG.Botznik2013.chr7.g46109 Boschl.CG.Botznik2013.chr7.g46110 Boschl.CG.Botznik2013.chr7.g46146 Boschl.CG.Botznik2013.chr7.g46147 Boschl.CG.Botznik2013.chr7.g46151 Boschl.CG.Botznik2013.chr7.g46192 Boschl.CG.Botznik2013.chr7.g46208 Boschl.CG.Botznik2013.chr7.g46209 Boschl.CG.Botznik2013.chr7.g46210 Click to show this node (Boschl) Boschl duplication node (click to collapse) Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chrUn Boschl.CG.Botznik2013.chrUn.g24505 Boschl.CG.Botznik2013.chrUn.g24506 Boschl.CG.Botznik2013.chrUn.g24508 Boschl.CG.Botznik2013.chrUn.g24509 Boschl.CG.Botznik2013.chrUn.g24510 Boschl.CG.Botznik2013.chrUn.g24514 Boschl.CG.Botznik2013.chrUn.g24517 Boschl.CG.Botznik2013.chrUn.g24518 Boschl.CG.Botznik2013.chrUn.g24520 Boschl.CG.Botznik2013.chrUn.g24521 Boschl.CG.Botznik2013.chrUn.g24522 Boschl.CG.Botznik2013.chrUn.g24523 Boschl.CG.Botznik2013.chrUn.g24525 Boschl.CG.Botznik2013.chrUn.g24526 Boschl.CG.Botznik2013.chrUn.g24528 Boschl.CG.Botznik2013.chrUn.g24530 Boschl.CG.Botznik2013.chrUn.g24531 Boschl.CG.Botznik2013.chrUn.g24533 Boschl.CG.Botznik2013.chrUn.g24540 Boschl.CG.Botznik2013.chrUn.g24541 Boschl.CG.Botznik2013.chrUn.g24542 Boschl.CG.Botznik2013.chrUn.g24544 Boschl.CG.Botznik2013.chrUn.g24549 Boschl.CG.Botznik2013.chrUn.g24551 Boschl.CG.Botznik2013.chrUn.g24552 Boschl.CG.Botznik2013.chrUn.g24553 Boschl.CG.Botznik2013.chrUn.g24554 Boschl.CG.Botznik2013.chrUn.g24556 Boschl.CG.Botznik2013.chrUn.g24560 Boschl.CG.Botznik2013.chrUn.g24561 Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chrUn Boschl.CG.Botznik2013.chrUn.g36679 Boschl.CG.Botznik2013.chrUn.g36681 Boschl.CG.Botznik2013.chrUn.g36682 Boschl.CG.Botznik2013.chrUn.g36684 Boschl.CG.Botznik2013.chrUn.g36686 Boschl.CG.Botznik2013.chrUn.g36687 Boschl.CG.Botznik2013.chrUn.g36690 Boschl.CG.Botznik2013.chrUn.g36692 Boschl.CG.Botznik2013.chrUn.g36694 Boschl.CG.Botznik2013.chrUn.g36700 Boschl.CG.Botznik2013.chrUn.g36701 Boschl.CG.Botznik2013.chrUn.g36702 Boschl.CG.Botznik2013.chrUn.g36706 Boschl.CG.Botznik2013.chrUn.g36709 Boschl.CG.Botznik2013.chrUn.g36710 Boschl.CG.Botznik2013.chrUn.g36712 Boschl.CG.Botznik2013.chrUn.g36713 Boschl.CG.Botznik2013.chrUn.g36716 Boschl.CG.Botznik2013.chrUn.g36718 Boschl.CG.Botznik2013.chrUn.g36719 Boschl.CG.Botznik2013.chrUn.g36720 Boschl.CG.Botznik2013.chrUn.g36721 Boschl.CG.Botznik2013.chrUn.g36722 Boschl.CG.Botznik2013.chrUn.g36723 Boschl.CG.Botznik2013.chrUn.g36728 Boschl.CG.Botznik2013.chrUn.g36730 Boschl.CG.Botznik2013.chrUn.g36731 Boschl.CG.Botznik2013.chrUn.g36733 Boschl.CG.Botznik2013.chrUn.g36736 Boschl.CG.Botznik2013.chrUn.g36738 Click to hide this line (7) 7 speciation node (click to collapse) 7 (~10 My ago) Click to hide this line (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) 6_Halocynthia (~10 My ago) Click to hide this line (Harore) Harore terminal node Harore - Chr:S101 Harore.CG.MTP2014.S101.g04248 Harore.CG.MTP2014.S101.g06081 Harore.CG.MTP2014.S101.g02809 Harore.CG.MTP2014.S101.g15453 Harore.CG.MTP2014.S101.g06311 Harore.CG.MTP2014.S101.g07366 Harore.CG.MTP2014.S101.g03042 Harore.CG.MTP2014.S101.g09581 Harore.CG.MTP2014.S101.g04413 Harore.CG.MTP2014.S101.g03446 Harore.CG.MTP2014.S101.g00793 Harore.CG.MTP2014.S101.g06044 Harore.CG.MTP2014.S101.g12280 Harore.CG.MTP2014.S101.g11714 Harore.CG.MTP2014.S101.g03985 Harore.CG.MTP2014.S101.g04676 Harore.CG.MTP2014.S101.g06209 Harore.CG.MTP2014.S101.g04882 Harore.CG.MTP2014.S101.g04428 Harore.CG.MTP2014.S101.g12870 Harore.CG.MTP2014.S101.g09708 Harore.CG.MTP2014.S101.g04847 Harore.CG.MTP2014.S101.g03572 Harore.CG.MTP2014.S101.g12032 Harore.CG.MTP2014.S101.g11954 Harore.CG.MTP2014.S101.g13472 Harore.CG.MTP2014.S101.g10180 Harore.CG.MTP2014.S101.g04197 Harore.CG.MTP2014.S101.g05478 Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S728 Haaura.CG.MTP2014.S728.g06429 Haaura.CG.MTP2014.S728.g06430 Haaura.CG.MTP2014.S728.g06431 Haaura.CG.MTP2014.S728.g06432 Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chrUn Boschl.CG.Botznik2013.chrUn.g07858 Boschl.CG.Botznik2013.chrUn.g07859 Boschl.CG.Botznik2013.chrUn.g07860 Boschl.CG.Botznik2013.chrUn.g07861 Boschl.CG.Botznik2013.chrUn.g07862 Boschl.CG.Botznik2013.chrUn.g07863 Boschl.CG.Botznik2013.chrUn.g07864 Boschl.CG.Botznik2013.chrUn.g07866 Boschl.CG.Botznik2013.chrUn.g07868 Boschl.CG.Botznik2013.chrUn.g07869 Boschl.CG.Botznik2013.chrUn.g07871 Boschl.CG.Botznik2013.chrUn.g07874 Boschl.CG.Botznik2013.chrUn.g07875 Boschl.CG.Botznik2013.chrUn.g07879 Boschl.CG.Botznik2013.chrUn.g07881 Boschl.CG.Botznik2013.chrUn.g07884 Boschl.CG.Botznik2013.chrUn.g07886 Boschl.CG.Botznik2013.chrUn.g07887 Boschl.CG.Botznik2013.chrUn.g07888 Boschl.CG.Botznik2013.chrUn.g07890 Boschl.CG.Botznik2013.chrUn.g07891 Boschl.CG.Botznik2013.chrUn.g07898 Boschl.CG.Botznik2013.chrUn.g07899 Boschl.CG.Botznik2013.chrUn.g07900 Boschl.CG.Botznik2013.chrUn.g07903 Boschl.CG.Botznik2013.chrUn.g07904 Boschl.CG.Botznik2013.chrUn.g07905 Boschl.CG.Botznik2013.chrUn.g07906 Boschl.CG.Botznik2013.chrUn.g07910 Boschl.CG.Botznik2013.chrUn.g07912 Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to show this node (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to show this node (2_Molgula) 2_Molgula duplication node (click to collapse) Click to show this node (2_Molgula) 2_Molgula speciation node (click to collapse) Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S88379 Moocci.CG.ELv1_2.S88379.g01223 Moocci.CG.ELv1_2.S88379.g01224 Moocci.CG.ELv1_2.S88379.g01225 Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S73799 Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S390358 Moocci.CG.ELv1_2.S390358.g11342 Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to show this node (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to show this node (2_Molgula) 2_Molgula duplication node (click to collapse) Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) Click to show this node (Moocul) Moocul duplication node (click to collapse) Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S10732 Click to show this node (Moocul) Moocul duplication node (click to collapse) Click to show this node (Moocul) Moocul duplication node (click to collapse) Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S118792 Moocul.CG.ELv1_2.S118792.g14049 Moocul.CG.ELv1_2.S118792.g14050 Moocul.CG.ELv1_2.S118792.g14053 Moocul.CG.ELv1_2.S118792.g14054 Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S98500 Moocul.CG.ELv1_2.S98500.g08508 Click to show this node (Moocul) Moocul duplication node (click to collapse) Click to show this node (Moocul) Moocul duplication node (click to collapse) Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S71154 Moocul.CG.ELv1_2.S71154.g04778 Moocul.CG.ELv1_2.S71154.g04780 Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S118792 Moocul.CG.ELv1_2.S118792.g14049 Moocul.CG.ELv1_2.S118792.g14050 Moocul.CG.ELv1_2.S118792.g14053 Moocul.CG.ELv1_2.S118792.g14054 Click to show this node (Moocul) Moocul duplication node (click to collapse) Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S101201 Click to show this node (Moocul) Moocul duplication node (click to collapse) Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S98908 Moocul.CG.ELv1_2.S98908.g08568 Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S98908 Moocul.CG.ELv1_2.S98908.g08568 Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S356654 Moocci.CG.ELv1_2.S356654.g09725 Moocci.CG.ELv1_2.S356654.g09726 Moocci.CG.ELv1_2.S356654.g09727 Moocci.CG.ELv1_2.S356654.g09728 Moocci.CG.ELv1_2.S356654.g09730 Moocci.CG.ELv1_2.S356654.g09731 Moocci.CG.ELv1_2.S356654.g09732 Click to show this node (2_Molgula) 2_Molgula speciation node (click to collapse) Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S20977 Moocul.CG.ELv1_2.S20977.g00806 KH2012:KH.C10.352 KH2012:KH.C10.149 KH2012:KH.C10.107 KH2012:KH.C10.32 KH2012:KH.C10.428 KH2012:KH.C10.151 KH2012:KH.C10.388 KH2012:KH.C10.502 KH2012:KH.C10.172 KH2012:KH.C10.287 KH2012:KH.C10.342 KH2012:KH.C10.7 KH2012:KH.C10.195 KH2012:KH.C10.267 KH2012:KH.C10.321 KH2012:KH.C10.380 KH2012:KH.C10.420 KH2012:KH.C10.417 KH2012:KH.C10.438 KH2012:KH.C10.611 KH2012:KH.C10.148 KH2012:KH.C10.577 KH2012:KH.C10.386 KH2012:KH.C10.354 KH2012:KH.C10.200 Fam001705.L.b.a KH2012:KH.C10.529 Cisavi.CG.ENS81.R44.443751-450878 (ENSCSAVG00000004854) Fam001705.L.b.b.a Fam001705.L.b.b.b KH2012:KH.C10.599 KH2012:KH.C10.301 KH2012:KH.C10.376 KH2012:KH.C10.599 KH2012:KH.C10.301 KH2012:KH.C10.376 Cisavi.CG.ENS81.R37.73985-77281 (ENSCSAVG00000001225) Cisavi.CG.ENS81.R37.77851-84264 (ENSCSAVG00000001229) Fam001705.L.b.b.a Fam001705.L.b.b.b Cisavi.CG.ENS81.R37.73985-77281 (ENSCSAVG00000001225) Cisavi.CG.ENS81.R37.77851-84264 (ENSCSAVG00000001229) KH2012:KH.C10.599 KH2012:KH.C10.301 KH2012:KH.C10.376 Fam001705.L.a Cisavi.CG.ENS81.R0.1505881-1508668 (ENSCSAVG00000008898) Cisavi.CG.ENS81.R0.1511259-1520428 (ENSCSAVG00000008901) Fam001705.L.a.b KH2012:KH.C10.513 Cisavi.CG.ENS81.R0.1505881-1508668 (ENSCSAVG00000008898) Cisavi.CG.ENS81.R0.1511259-1520428 (ENSCSAVG00000008901) Fam001705.L.a Phfumi.CG.MTP2014.S1437.g03709 Phmamm.CG.MTP2014.S919.g12776 Phmamm.CG.MTP2014.S1806.g15685 Fam001705.M Fam001705.M Boschl.CG.Botznik2013.chr6.g55040 Harore.CG.MTP2014.S101.g01561 Harore.CG.MTP2014.S101.g13415 Fam001705.M.b Haaura.CG.MTP2014.S728.g06433 Haaura.CG.MTP2014.S728.g06434 Harore.CG.MTP2014.S2416.g08807 Fam001705.M KH2012:KH.L16.2 Fam001705.M Phfumi.CG.MTP2014.S1896.g04260 Phmamm.CG.MTP2014.S624.g10673 Fam001705.N Cisavi.CG.ENS81.R1063.3461-8924 (ENSCSAVG00000002437) KH2012:KH.C1.50 Fam001705.O Fam001705.O Fam001705.O Fam001705.O.a Fam001705.O.a ENSG00000016391 ENSMUSG00000015970 Fam001705.O.a ENSPSIG00000003349 ENSGALG00000005363 ENSLACG00000011169 Fam001705.O Boschl.CG.Botznik2013.chr1.g12985 Fam001705.O.d Fam001705.O.d Haaura.CG.MTP2014.S144.g02631 Harore.CG.MTP2014.S99.g15541 Fam001705.O.d Moocul.CG.ELv1_2.S76988.g05472 Moocul.CG.ELv1_2.S32427.g01586 Moocci.CG.ELv1_2.S497999.g18919 Fam001705.O Fam001705.O KH2012:KH.L18.114 Cisavi.CG.ENS81.R173.409065-415210 (ENSCSAVG00000007907) Fam001705.O Phmamm.CG.MTP2014.S551.g09978 Phfumi.CG.MTP2014.S89.g00920 221140F 221150F 077540R 221140F 221150F Sakowv30012889m.g SPU_027298 SPU_015707 SPU_023085 SPU_027294 SPU_027295 SPU_027296 SPU_027297 SPU_013308 SPU_027298 SPU_015707 SPU_023085 SPU_027298 SPU_015707 SPU_023085 SPU_027294 SPU_027295 SPU_027296 SPU_027297 SPU_013308 SPU_027294 SPU_027295 SPU_027296 SPU_027297 SPU_013308 SPU_027294 SPU_027295 SPU_027296 SPU_027297 SPU_013308 SPU_027294 SPU_027295 SPU_027296 SPU_027297 SPU_013308 Sakowv30026326m.g Sakowv30010909m.g Boschl.CG.Botznik2013.chr7.g46043 Boschl.CG.Botznik2013.chrUn.g24529 Boschl.CG.Botznik2013.chrUn.g36711 Fam001705.R.b Fam001705.R.b Harore.CG.MTP2014.S101.g01561 Harore.CG.MTP2014.S101.g13415 Haaura.CG.MTP2014.S728.g06433 Haaura.CG.MTP2014.S728.g06434 Boschl.CG.Botznik2013.chrUn.g07883 Moocci.CG.ELv1_2.S88379.g01222 Fam001705.S.b Moocul.CG.ELv1_2.S73799.g05114 Moocci.CG.ELv1_2.S390358.g11341 Fam001705.K.a Moocul.CG.ELv1_2.S10732.g00318 Moocul.CG.ELv1_2.S118792.g14051 Moocul.CG.ELv1_2.S118792.g14052 Moocul.CG.ELv1_2.S98500.g08507 Moocul.CG.ELv1_2.S71154.g04779 Moocul.CG.ELv1_2.S118792.g14051 Moocul.CG.ELv1_2.S118792.g14052 Moocul.CG.ELv1_2.S101201.g09063 Moocul.CG.ELv1_2.S98908.g08569 Moocul.CG.ELv1_2.S98908.g08570 Moocul.CG.ELv1_2.S98908.g08569 Moocul.CG.ELv1_2.S98908.g08570 Moocci.CG.ELv1_2.S356654.g09729 Moocul.CG.ELv1_2.S20977.g00807 Fam007599.b KH2012:KH.C10.68 Cisavi.CG.ENS81.R44.451800-457909 (ENSCSAVG00000004885) KH2012:KH.C10.211 KH2012:KH.C10.94 KH2012:KH.C10.559 KH2012:KH.C10.243