Reference Gene Name: KH2012:KH.C10.524 Ensembl
Reference Species : Cirobu
Root Species : 34_Deuterostomia (~10 million years) 		34_Deuterostomia Link Wikipedia to Cirobu Link Ensembl
×2 ÷2 Center the view on the reference gene Shift 1 gene on the left Shift 5 genes on the left Shift 1 gene on the right Shift 5 genes on the right Zoom out Show 1 less gene on each side Show 1 more gene on each side Show half the number of genes on each side Show twice more genes on each side Zoom in
Schematic scale
Genomic scale
dN/dS Ratio
Protein Similarity
CNE Track
34_Deuterostomia speciation node (click to collapse) 34_Deuterostomia (~10 My ago) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to show this node (28) 28 speciation node (click to collapse) Click to hide this line (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) 16_Ascidiacea (~10 My ago) Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) - block_205 Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_121 Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC10 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_0 Cisavi.CG.ENS81.R0.420822-422394 (ENSCSAVG00000006037) Cisavi.CG.ENS81.R0.422604-424867 (ENSCSAVG00000006047) Cisavi.CG.ENS81.R0.427613-431926 (ENSCSAVG00000006050) Cisavi.CG.ENS81.R0.432243-437294 (ENSCSAVG00000006054) Cisavi.CG.ENS81.R0.438004-440109 (ENSCSAVG00000006060) Cisavi.CG.ENS81.R0.452745-454368 (ENSCSAVG00000006065) Cisavi.CG.ENS81.R0.461990-467720 (ENSCSAVG00000006068) Cisavi.CG.ENS81.R0.565238-566576 (ENSCSAVG00000006884) Cisavi.CG.ENS81.R0.614724-615404 (ENSCSAVG00000006894) Cisavi.CG.ENS81.R0.635970-647879 (ENSCSAVG00000006923) Cisavi.CG.ENS81.R0.648051-650823 (ENSCSAVG00000006929) Cisavi.CG.ENS81.R0.653061-654338 (ENSCSAVG00000006931) Cisavi.CG.ENS81.R0.673011-689298 (ENSCSAVG00000006933) Cisavi.CG.ENS81.R0.696151-699296 (ENSCSAVG00000007500) Cisavi.CG.ENS81.R0.708220-710333 (ENSCSAVG00000007504) Cisavi.CG.ENS81.R0.717535-718627 (ENSCSAVG00000007507) Cisavi.CG.ENS81.R0.719832-723382 (ENSCSAVG00000007509) Cisavi.CG.ENS81.R0.724050-726082 (ENSCSAVG00000007513) Cisavi.CG.ENS81.R0.731832-734674 (ENSCSAVG00000007519) Cisavi.CG.ENS81.R0.736328-738936 (ENSCSAVG00000007524) Cisavi.CG.ENS81.R0.783883-794922 (ENSCSAVG00000007527) Cisavi.CG.ENS81.R0.908639-910049 (ENSCSAVG00000007549) Cisavi.CG.ENS81.R0.914134-918423 (ENSCSAVG00000007552) Cisavi.CG.ENS81.R0.929950-943294 (ENSCSAVG00000007559) Click to hide this line (14_Phallusia) 14_Phallusia speciation node (click to collapse) 14_Phallusia (~10 My ago) - block_268 Fam010706 Click to hide this line (Phfumi) Phfumi terminal node Phfumi - Chr:S172 Phfumi.CG.MTP2014.S172.g01297 Phfumi.CG.MTP2014.S172.g01299 Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S181 Phmamm.CG.MTP2014.S181.g04866 Phmamm.CG.MTP2014.S181.g04867 Phmamm.CG.MTP2014.S181.g04868 Phmamm.CG.MTP2014.S181.g04869 Phmamm.CG.MTP2014.S181.g04870 Phmamm.CG.MTP2014.S181.g04871 Phmamm.CG.MTP2014.S181.g04872 Phmamm.CG.MTP2014.S181.g04873 Phmamm.CG.MTP2014.S181.g04875 Phmamm.CG.MTP2014.S181.g04876 Phmamm.CG.MTP2014.S181.g04877 Phmamm.CG.MTP2014.S181.g04879 Phmamm.CG.MTP2014.S181.g04880 Phmamm.CG.MTP2014.S181.g04884 Phmamm.CG.MTP2014.S181.g04885 Click to show this node (8_Stolidobranchia) 8_Stolidobranchia duplication node (click to collapse) Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to show this node (7) 7 speciation node (click to collapse) Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chrUn Boschl.CG.Botznik2013.chrUn.g04649 Boschl.CG.Botznik2013.chrUn.g04650 Boschl.CG.Botznik2013.chrUn.g04653 Boschl.CG.Botznik2013.chrUn.g04656 Boschl.CG.Botznik2013.chrUn.g04658 Boschl.CG.Botznik2013.chrUn.g04659 Boschl.CG.Botznik2013.chrUn.g04660 Boschl.CG.Botznik2013.chrUn.g04661 Boschl.CG.Botznik2013.chrUn.g04670 Boschl.CG.Botznik2013.chrUn.g04671 Boschl.CG.Botznik2013.chrUn.g04673 Boschl.CG.Botznik2013.chrUn.g04676 Boschl.CG.Botznik2013.chrUn.g04677 Boschl.CG.Botznik2013.chrUn.g04679 Boschl.CG.Botznik2013.chrUn.g04680 Boschl.CG.Botznik2013.chrUn.g04683 Boschl.CG.Botznik2013.chrUn.g04684 Boschl.CG.Botznik2013.chrUn.g04685 Boschl.CG.Botznik2013.chrUn.g04686 Boschl.CG.Botznik2013.chrUn.g04688 Boschl.CG.Botznik2013.chrUn.g04690 Boschl.CG.Botznik2013.chrUn.g04691 Boschl.CG.Botznik2013.chrUn.g04693 Boschl.CG.Botznik2013.chrUn.g04694 Boschl.CG.Botznik2013.chrUn.g04695 Boschl.CG.Botznik2013.chrUn.g04696 Boschl.CG.Botznik2013.chrUn.g04701 Boschl.CG.Botznik2013.chrUn.g04702 Boschl.CG.Botznik2013.chrUn.g04707 Boschl.CG.Botznik2013.chrUn.g04708 Click to show this node (8_Stolidobranchia) 8_Stolidobranchia duplication node (click to collapse) Click to hide this line (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) 8_Stolidobranchia (~10 My ago) - block_687 Fam000907 Click to show this node (2_Molgula) 2_Molgula duplication node (click to collapse) Click to show this node (2_Molgula) 2_Molgula speciation node (click to collapse) Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S368023 Moocci.CG.ELv1_2.S368023.g10290 Moocci.CG.ELv1_2.S368023.g10291 Moocci.CG.ELv1_2.S368023.g10292 Moocci.CG.ELv1_2.S368023.g10293 Moocci.CG.ELv1_2.S368023.g10294 Moocci.CG.ELv1_2.S368023.g10297 Moocci.CG.ELv1_2.S368023.g10298 Moocci.CG.ELv1_2.S368023.g10300 Moocci.CG.ELv1_2.S368023.g10301 Click to show this node (2_Molgula) 2_Molgula duplication node (click to collapse) Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) - block_613 Fam000907 Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S368023 Moocci.CG.ELv1_2.S368023.g10290 Moocci.CG.ELv1_2.S368023.g10291 Moocci.CG.ELv1_2.S368023.g10292 Moocci.CG.ELv1_2.S368023.g10293 Moocci.CG.ELv1_2.S368023.g10294 Moocci.CG.ELv1_2.S368023.g10297 Moocci.CG.ELv1_2.S368023.g10298 Moocci.CG.ELv1_2.S368023.g10300 Moocci.CG.ELv1_2.S368023.g10301 Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S108632 Moocul.CG.ELv1_2.S108632.g10945 Moocul.CG.ELv1_2.S108632.g10946 Moocul.CG.ELv1_2.S108632.g10947 Moocul.CG.ELv1_2.S108632.g10948 Moocul.CG.ELv1_2.S108632.g10949 Moocul.CG.ELv1_2.S108632.g10950 Moocul.CG.ELv1_2.S108632.g10951 Moocul.CG.ELv1_2.S108632.g10952 Moocul.CG.ELv1_2.S108632.g10953 Moocul.CG.ELv1_2.S108632.g10954 Moocul.CG.ELv1_2.S108632.g10955 Moocul.CG.ELv1_2.S108632.g10956 Moocul.CG.ELv1_2.S108632.g10957 Moocul.CG.ELv1_2.S108632.g10959 Moocul.CG.ELv1_2.S108632.g10960 Click to show this node (2_Molgula) 2_Molgula speciation node (click to collapse) Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S368023 Moocci.CG.ELv1_2.S368023.g10290 Moocci.CG.ELv1_2.S368023.g10291 Moocci.CG.ELv1_2.S368023.g10292 Moocci.CG.ELv1_2.S368023.g10293 Moocci.CG.ELv1_2.S368023.g10294 Moocci.CG.ELv1_2.S368023.g10297 Moocci.CG.ELv1_2.S368023.g10298 Moocci.CG.ELv1_2.S368023.g10300 Moocci.CG.ELv1_2.S368023.g10301 Click to hide this line (7) 7 speciation node (click to collapse) 7 (~10 My ago) - block_261 Fam000907.b Click to show this node (Boschl) Boschl duplication node (click to collapse) Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chrUn Boschl.CG.Botznik2013.chrUn.g06571 Boschl.CG.Botznik2013.chrUn.g06575 Boschl.CG.Botznik2013.chrUn.g06576 Boschl.CG.Botznik2013.chrUn.g06580 Boschl.CG.Botznik2013.chrUn.g06581 Boschl.CG.Botznik2013.chrUn.g06582 Boschl.CG.Botznik2013.chrUn.g06584 Boschl.CG.Botznik2013.chrUn.g06585 Boschl.CG.Botznik2013.chrUn.g06589 Boschl.CG.Botznik2013.chrUn.g06590 Boschl.CG.Botznik2013.chrUn.g06594 Boschl.CG.Botznik2013.chrUn.g06595 Boschl.CG.Botznik2013.chrUn.g06596 Boschl.CG.Botznik2013.chrUn.g06597 Boschl.CG.Botznik2013.chrUn.g06601 Boschl.CG.Botznik2013.chrUn.g06603 Boschl.CG.Botznik2013.chrUn.g06607 Boschl.CG.Botznik2013.chrUn.g06608 Boschl.CG.Botznik2013.chrUn.g06609 Boschl.CG.Botznik2013.chrUn.g06610 Boschl.CG.Botznik2013.chrUn.g06611 Boschl.CG.Botznik2013.chrUn.g06612 Boschl.CG.Botznik2013.chrUn.g06613 Boschl.CG.Botznik2013.chrUn.g06616 Boschl.CG.Botznik2013.chrUn.g06619 Boschl.CG.Botznik2013.chrUn.g06620 Boschl.CG.Botznik2013.chrUn.g06621 Boschl.CG.Botznik2013.chrUn.g06622 Boschl.CG.Botznik2013.chrUn.g06623 Boschl.CG.Botznik2013.chrUn.g06626 Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chr9 Boschl.CG.Botznik2013.chr9.g21833 Boschl.CG.Botznik2013.chr9.g21834 Boschl.CG.Botznik2013.chr9.g21982 Boschl.CG.Botznik2013.chr9.g21983 Boschl.CG.Botznik2013.chr9.g22077 Boschl.CG.Botznik2013.chr9.g22300 Boschl.CG.Botznik2013.chr9.g22302 Boschl.CG.Botznik2013.chr9.g22681 Boschl.CG.Botznik2013.chr9.g22687 Boschl.CG.Botznik2013.chr9.g22688 Boschl.CG.Botznik2013.chr9.g23005 Boschl.CG.Botznik2013.chr9.g23006 Boschl.CG.Botznik2013.chr9.g23087 Boschl.CG.Botznik2013.chr9.g23088 Boschl.CG.Botznik2013.chr9.g23089 Boschl.CG.Botznik2013.chr9.g23367 Boschl.CG.Botznik2013.chr9.g23690 Boschl.CG.Botznik2013.chr9.g23796 Boschl.CG.Botznik2013.chr9.g23861 Boschl.CG.Botznik2013.chr9.g24090 Boschl.CG.Botznik2013.chr9.g24187 Boschl.CG.Botznik2013.chr9.g24188 Boschl.CG.Botznik2013.chr9.g24209 Boschl.CG.Botznik2013.chr9.g24232 Boschl.CG.Botznik2013.chr9.g24369 Boschl.CG.Botznik2013.chr9.g24493 Boschl.CG.Botznik2013.chr9.g24621 Boschl.CG.Botznik2013.chr9.g24845 Boschl.CG.Botznik2013.chr9.g24847 Boschl.CG.Botznik2013.chr9.g25035 Click to hide this line (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) 6_Halocynthia (~10 My ago) - block_201 Fam002545.I.b.a Fam009447 Fam001928.F Fam005878.a.a Fam002636.B Fam000907.b Click to hide this line (Harore) Harore terminal node Harore - Chr:S59 Harore.CG.MTP2014.S59.g11486 Harore.CG.MTP2014.S59.g13100 Harore.CG.MTP2014.S59.g07154 Harore.CG.MTP2014.S59.g04138 Harore.CG.MTP2014.S59.g07872 Harore.CG.MTP2014.S59.g01977 Harore.CG.MTP2014.S59.g01770 Harore.CG.MTP2014.S59.g08250 Harore.CG.MTP2014.S59.g14987 Harore.CG.MTP2014.S59.g09186 Harore.CG.MTP2014.S59.g01385 Harore.CG.MTP2014.S59.g03814 Harore.CG.MTP2014.S59.g01311 Harore.CG.MTP2014.S59.g14620 Harore.CG.MTP2014.S59.g01038 Harore.CG.MTP2014.S59.g00086 Harore.CG.MTP2014.S59.g13723 Harore.CG.MTP2014.S59.g05299 Harore.CG.MTP2014.S59.g15891 Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S285 Haaura.CG.MTP2014.S285.g03986 Haaura.CG.MTP2014.S285.g03987 Haaura.CG.MTP2014.S285.g03988 Haaura.CG.MTP2014.S285.g03989 Haaura.CG.MTP2014.S285.g03991 Haaura.CG.MTP2014.S285.g03993 Haaura.CG.MTP2014.S285.g03994 Haaura.CG.MTP2014.S285.g03995 Haaura.CG.MTP2014.S285.g03996 Haaura.CG.MTP2014.S285.g03997 Haaura.CG.MTP2014.S285.g03998 Click to show this node (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) Click to hide this line (7) 7 speciation node (click to collapse) 7 (~10 My ago) Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chrUn Boschl.CG.Botznik2013.chrUn.g18205 Boschl.CG.Botznik2013.chrUn.g18206 Boschl.CG.Botznik2013.chrUn.g18208 Boschl.CG.Botznik2013.chrUn.g18211 Boschl.CG.Botznik2013.chrUn.g18212 Boschl.CG.Botznik2013.chrUn.g18213 Boschl.CG.Botznik2013.chrUn.g18218 Boschl.CG.Botznik2013.chrUn.g18219 Boschl.CG.Botznik2013.chrUn.g18221 Boschl.CG.Botznik2013.chrUn.g18224 Boschl.CG.Botznik2013.chrUn.g18225 Boschl.CG.Botznik2013.chrUn.g18226 Boschl.CG.Botznik2013.chrUn.g18227 Boschl.CG.Botznik2013.chrUn.g18229 Boschl.CG.Botznik2013.chrUn.g18230 Boschl.CG.Botznik2013.chrUn.g18232 Boschl.CG.Botznik2013.chrUn.g18233 Boschl.CG.Botznik2013.chrUn.g18234 Boschl.CG.Botznik2013.chrUn.g18239 Boschl.CG.Botznik2013.chrUn.g18242 Boschl.CG.Botznik2013.chrUn.g18245 Boschl.CG.Botznik2013.chrUn.g18249 Boschl.CG.Botznik2013.chrUn.g18251 Boschl.CG.Botznik2013.chrUn.g18252 Boschl.CG.Botznik2013.chrUn.g18253 Boschl.CG.Botznik2013.chrUn.g18259 Boschl.CG.Botznik2013.chrUn.g18261 Boschl.CG.Botznik2013.chrUn.g18262 Boschl.CG.Botznik2013.chrUn.g18263 Boschl.CG.Botznik2013.chrUn.g18264 Click to hide this line (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) 6_Halocynthia (~10 My ago) Click to hide this line (Harore) Harore terminal node Harore - Chr:S59 Harore.CG.MTP2014.S59.g07154 Harore.CG.MTP2014.S59.g04138 Harore.CG.MTP2014.S59.g07872 Harore.CG.MTP2014.S59.g01977 Harore.CG.MTP2014.S59.g01770 Harore.CG.MTP2014.S59.g08250 Harore.CG.MTP2014.S59.g14987 Harore.CG.MTP2014.S59.g09186 Harore.CG.MTP2014.S59.g01385 Harore.CG.MTP2014.S59.g03814 Harore.CG.MTP2014.S59.g01311 Harore.CG.MTP2014.S59.g14620 Harore.CG.MTP2014.S59.g01038 Harore.CG.MTP2014.S59.g00086 Harore.CG.MTP2014.S59.g13723 Harore.CG.MTP2014.S59.g05299 Harore.CG.MTP2014.S59.g15891 Click to show this node (Haaura) Haaura duplication node (click to collapse) Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S6726 Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S285 Haaura.CG.MTP2014.S285.g03986 Haaura.CG.MTP2014.S285.g03987 Haaura.CG.MTP2014.S285.g03988 Haaura.CG.MTP2014.S285.g03989 Haaura.CG.MTP2014.S285.g03991 Haaura.CG.MTP2014.S285.g03993 Haaura.CG.MTP2014.S285.g03994 Haaura.CG.MTP2014.S285.g03995 Haaura.CG.MTP2014.S285.g03996 Haaura.CG.MTP2014.S285.g03997 Haaura.CG.MTP2014.S285.g03998 Fam008534 Fam008534 KH2012:KH.C10.233 Cisavi.CG.ENS81.R0.595330-600493 (ENSCSAVG00000006890) Fam008534 Phmamm.CG.MTP2014.S181.g04883 Fam008756 Fam008756 KH2012:KH.C10.506 Fam008756 Phfumi.CG.MTP2014.S172.g01295 Phmamm.CG.MTP2014.S181.g04882 KH2012:KH.C10.459 Phfumi.CG.MTP2014.S172.g01298 Phmamm.CG.MTP2014.S181.g04878 KH2012:KH.C10.336 KH2012:KH.C10.270 Phmamm.CG.MTP2014.S181.g04874 KH2012:KH.C10.2 KH2012:KH.C10.546 KH2012:KH.C10.410 Fam005544 KH2012:KH.C10.541 KH2012:KH.C10.612 KH2012:KH.C10.311 KH2012:KH.C10.454 Fam001919.B Fam001919.B Fam001919.B Fam001919.B KH2012:KH.C10.524 Cisavi.CG.ENS81.R0.616624-630179 (ENSCSAVG00000006902) Fam001919.B Phfumi.CG.MTP2014.S172.g01296 Phmamm.CG.MTP2014.S181.g04881 Boschl.CG.Botznik2013.chrUn.g04682 Fam001919.B.b.a Moocci.CG.ELv1_2.S368023.g10295 Moocci.CG.ELv1_2.S368023.g10296 Moocci.CG.ELv1_2.S368023.g10299 Fam001919.B.b.a.b.a Moocci.CG.ELv1_2.S368023.g10295 Moocci.CG.ELv1_2.S368023.g10296 Moocci.CG.ELv1_2.S368023.g10299 Moocul.CG.ELv1_2.S108632.g10958 Moocci.CG.ELv1_2.S368023.g10295 Moocci.CG.ELv1_2.S368023.g10296 Moocci.CG.ELv1_2.S368023.g10299 Fam001919.B.b.a Boschl.CG.Botznik2013.chrUn.g06602 Boschl.CG.Botznik2013.chr9.g23366 Fam001919.B.b.a Harore.CG.MTP2014.S59.g08947 Harore.CG.MTP2014.S59.g09548 Haaura.CG.MTP2014.S285.g03990 Haaura.CG.MTP2014.S285.g03992 Fam001919.B.b.b Boschl.CG.Botznik2013.chrUn.g18231 Fam001919.B.b.b Harore.CG.MTP2014.S59.g08947 Harore.CG.MTP2014.S59.g09548 Haaura.CG.MTP2014.S6726.g11133 Haaura.CG.MTP2014.S285.g03990 Haaura.CG.MTP2014.S285.g03992 KH2012:KH.C10.227 KH2012:KH.C10.431 KH2012:KH.C10.485 KH2012:KH.C10.259 KH2012:KH.C10.460 Fam001925.E.a.b KH2012:KH.C10.55 Cisavi.CG.ENS81.R0.557979-560577 (ENSCSAVG00000006881) Phmamm.CG.MTP2014.S181.g04886 KH2012:KH.C10.225 KH2012:KH.C10.618 KH2012:KH.C10.294 Fam009879.d KH2012:KH.C10.382 Cisavi.CG.ENS81.R0.476551-479089 (ENSCSAVG00000006081) Cisavi.CG.ENS81.R0.467811-471494 (ENSCSAVG00000006075) KH2012:KH.C10.318 Fam002227.C KH2012:KH.C10.368 Cisavi.CG.ENS81.R0.580733-592345 (ENSCSAVG00000006887) KH2012:KH.C10.279 KH2012:KH.C10.403 KH2012:KH.C10.409 Fam002370.C.a.b KH2012:KH.C10.19 Cisavi.CG.ENS81.R0.495844-555396 (ENSCSAVG00000006085) Phmamm.CG.MTP2014.S181.g04887 KH2012:KH.C10.185 KH2012:KH.C10.6