Reference Gene Name: KH2012:KH.C10.523 Ensembl
Reference Species : Cirobu
Root Species : 34_Deuterostomia (~10 million years) 		34_Deuterostomia Link Wikipedia to Cirobu Link Ensembl
×2 ÷2 Center the view on the reference gene Shift 1 gene on the left Shift 5 genes on the left Shift 1 gene on the right Shift 5 genes on the right Zoom out Show 1 less gene on each side Show 1 more gene on each side Show half the number of genes on each side Show twice more genes on each side Zoom in
Schematic scale
Genomic scale
dN/dS Ratio
Protein Similarity
CNE Track
34_Deuterostomia duplication node (click to collapse) 34_Deuterostomia (~10 My ago) Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to hide this line (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) 34_Deuterostomia (~10 My ago) Click to hide this line (30_Chordata) 30_Chordata speciation node (click to collapse) 30_Chordata (~10 My ago) Click to hide this line (28) 28 speciation node (click to collapse) 28 (~10 My ago) Click to hide this line (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) 16_Ascidiacea (~10 My ago) Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) - block_98 Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_31 Fam002692.E.b.b Fam007605 Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC10 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_37 Cisavi.CG.ENS81.R37.1734506-1748292 (ENSCSAVG00000005844) Cisavi.CG.ENS81.R37.1808244-1813473 (ENSCSAVG00000005937) Cisavi.CG.ENS81.R37.1833906-1834615 (ENSCSAVG00000005990) Cisavi.CG.ENS81.R37.1839044-1844236 (ENSCSAVG00000005993) Cisavi.CG.ENS81.R37.1866233-1867021 (ENSCSAVG00000006005) Cisavi.CG.ENS81.R37.1868325-1868906 (ENSCSAVG00000006007) Cisavi.CG.ENS81.R37.1876404-1880045 (ENSCSAVG00000006010) Cisavi.CG.ENS81.R37.1886724-1894805 (ENSCSAVG00000006014) Cisavi.CG.ENS81.R37.1902634-1904479 (ENSCSAVG00000006026) Cisavi.CG.ENS81.R37.1915808-1918595 (ENSCSAVG00000006035) Cisavi.CG.ENS81.R37.1955387-1970262 (ENSCSAVG00000006202) Cisavi.CG.ENS81.R37.1972817-1988217 (ENSCSAVG00000006274) Cisavi.CG.ENS81.R37.1989126-1999409 (ENSCSAVG00000006415) Cisavi.CG.ENS81.R37.2028859-2029572 (ENSCSAVG00000006642) Cisavi.CG.ENS81.R37.2131152-2134054 (ENSCSAVG00000006654) Cisavi.CG.ENS81.R37.2136719-2139543 (ENSCSAVG00000006655) Cisavi.CG.ENS81.R37.2155434-2185142 (ENSCSAVG00000006658) Cisavi.CG.ENS81.R37.2185178-2188218 (ENSCSAVG00000006790) Cisavi.CG.ENS81.R37.2194694-2196847 (ENSCSAVG00000006795) Cisavi.CG.ENS81.R37.2203163-2210118 (ENSCSAVG00000006798) Click to show this node (14_Phallusia) 14_Phallusia duplication node (click to collapse) Click to hide this line (14_Phallusia) 14_Phallusia speciation node (click to collapse) 14_Phallusia (~10 My ago) - block_961 Fam003765.c.a Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S2363 Phmamm.CG.MTP2014.S2363.g16583 Click to hide this line (Phfumi) Phfumi terminal node Phfumi - Chr:S1049 Phfumi.CG.MTP2014.S1049.g03168 Phfumi.CG.MTP2014.S1049.g03169 Click to show this node (14_Phallusia) 14_Phallusia speciation node (click to collapse) Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S1003 Phmamm.CG.MTP2014.S1003.g13205 Phmamm.CG.MTP2014.S1003.g13206 Click to hide this line (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) 8_Stolidobranchia (~10 My ago) Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S491613 Moocci.CG.ELv1_2.S491613.g18166 Moocci.CG.ELv1_2.S491613.g18167 Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S55931 Moocul.CG.ELv1_2.S55931.g03363 Moocul.CG.ELv1_2.S55931.g03365 Click to hide this line (7) 7 speciation node (click to collapse) 7 (~10 My ago) Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chr5 Boschl.CG.Botznik2013.chr5.g71692 Boschl.CG.Botznik2013.chr5.g71694 Boschl.CG.Botznik2013.chr5.g71702 Boschl.CG.Botznik2013.chr5.g71703 Boschl.CG.Botznik2013.chr5.g71704 Boschl.CG.Botznik2013.chr5.g71711 Boschl.CG.Botznik2013.chr5.g71712 Boschl.CG.Botznik2013.chr5.g71713 Boschl.CG.Botznik2013.chr5.g71737 Boschl.CG.Botznik2013.chr5.g71738 Boschl.CG.Botznik2013.chr5.g71740 Boschl.CG.Botznik2013.chr5.g71759 Boschl.CG.Botznik2013.chr5.g71764 Boschl.CG.Botznik2013.chr5.g71765 Boschl.CG.Botznik2013.chr5.g71767 Boschl.CG.Botznik2013.chr5.g71785 Boschl.CG.Botznik2013.chr5.g71789 Boschl.CG.Botznik2013.chr5.g71813 Boschl.CG.Botznik2013.chr5.g71828 Boschl.CG.Botznik2013.chr5.g71842 Boschl.CG.Botznik2013.chr5.g71843 Boschl.CG.Botznik2013.chr5.g71844 Boschl.CG.Botznik2013.chr5.g71866 Boschl.CG.Botznik2013.chr5.g71883 Boschl.CG.Botznik2013.chr5.g71897 Boschl.CG.Botznik2013.chr5.g71907 Boschl.CG.Botznik2013.chr5.g71915 Boschl.CG.Botznik2013.chr5.g71919 Boschl.CG.Botznik2013.chr5.g71920 Boschl.CG.Botznik2013.chr5.g71931 Click to hide this line (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) 6_Halocynthia (~10 My ago) - block_286 Fam003996.b Fam002328.L.a.b.a Fam002328.L.a.a Fam003171.A.c.d Fam003171.A.c.c Click to hide this line (Harore) Harore terminal node Harore - Chr:S13 Harore.CG.MTP2014.S13.g09684 Harore.CG.MTP2014.S13.g14127 Harore.CG.MTP2014.S13.g05520 Harore.CG.MTP2014.S13.g02640 Harore.CG.MTP2014.S13.g03593 Harore.CG.MTP2014.S13.g02720 Harore.CG.MTP2014.S13.g09361 Harore.CG.MTP2014.S13.g04210 Harore.CG.MTP2014.S13.g03522 Harore.CG.MTP2014.S13.g12884 Harore.CG.MTP2014.S13.g07914 Harore.CG.MTP2014.S13.g03323 Harore.CG.MTP2014.S13.g08378 Harore.CG.MTP2014.S13.g14600 Harore.CG.MTP2014.S13.g08205 Harore.CG.MTP2014.S13.g00582 Harore.CG.MTP2014.S13.g07156 Harore.CG.MTP2014.S13.g10585 Harore.CG.MTP2014.S13.g06943 Harore.CG.MTP2014.S13.g07487 Harore.CG.MTP2014.S13.g04373 Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S257 Haaura.CG.MTP2014.S257.g03745 Haaura.CG.MTP2014.S257.g03746 Haaura.CG.MTP2014.S257.g03747 Haaura.CG.MTP2014.S257.g03748 Haaura.CG.MTP2014.S257.g03750 Haaura.CG.MTP2014.S257.g03751 Haaura.CG.MTP2014.S257.g03752 Haaura.CG.MTP2014.S257.g03753 Click to hide this line (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) 26_Sarcopterygii (~10 My ago) Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH126665.1 ENSLACG00000002778 ENSLACG00000004578 ENSLACG00000006230 ENSLACG00000006814 ENSLACG00000008032 ENSLACG00000008711 ENSLACG00000009444 ENSLACG00000012610 ENSLACG00000012741 ENSLACG00000013621 ENSLACG00000022353 ENSLACG00000022204 ENSLACG00000014550 ENSLACG00000014252 ENSLACG00000015334 ENSLACG00000015550 ENSLACG00000015948 ENSLACG00000016146 ENSLACG00000016315 ENSLACG00000016516 ENSLACG00000016771 ENSLACG00000017362 ENSLACG00000017579 ENSLACG00000017678 ENSLACG00000017802 Click to hide this line (25_Amniota) 25_Amniota speciation node (click to collapse) 25_Amniota (~10 My ago) - block_277 Fam001822.C Fam000498.b.b Fam003760 Fam001701.I.f.b Fam004960.b.b Click to hide this line (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) 21_Archelosauria (~10 My ago) - block_184 Fam002736.B.a.a.b Fam004246 Fam002568.G.c.a Fam004764.A.a.b.b Fam004960.b.b Fam001701.I.f.b Fam003760 Fam000498.b.b Fam001822.C Click to hide this line (Psin) Psin terminal node Psin - Chr:JH209338.1 ENSPSIG00000011162 ENSPSIG00000007646 ENSPSIG00000008178 ENSPSIG00000008932 ENSPSIG00000014140 Click to hide this line (Ggal) Ggal terminal node Ggal Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) - block_6 Fam001682.Q Fam005996.a.b Fam006004.A Fam007813 Fam011290.a.a.a.a.a.b Fam007107.b Fam002902.B.a Fam001865.G.a.a Fam004268.a Fam002736.B.a.a.b Fam004246 Fam002568.G.c.a Fam004960.b.b Fam001701.I.f.b Fam003760 Fam000498.b.b Fam001822.C Fam002564.W.a.a Fam002349.M.b.b.b.a.a Fam002321.K.a.b Fam007112.b.a Fam002325.G.c.a.b Fam003531.b Fam006005.a Fam002811.A.a Fam007402.A.b.b Fam002387.d Fam002580.B.a.b Fam006724.A.b Fam004966.a.b.b Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:8 ENSMUSG00000078144 ENSMUSG00000055368 ENSMUSG00000071047 ENSMUSG00000078964 ENSMUSG00000057400 ENSMUSG00000056973 ENSMUSG00000061959 ENSMUSG00000031725 ENSMUSG00000057074 ENSMUSG00000074156 ENSMUSG00000058019 ENSMUSG00000031748 ENSMUSG00000031751 ENSMUSG00000031754 ENSMUSG00000033009 ENSMUSG00000031757 ENSMUSG00000031760 ENSMUSG00000031762 ENSMUSG00000031765 ENSMUSG00000032939 ENSMUSG00000031766 ENSMUSG00000031770 ENSMUSG00000074151 ENSMUSG00000034361 ENSMUSG00000031774 ENSMUSG00000050079 ENSMUSG00000031776 ENSMUSG00000031775 ENSMUSG00000031779 ENSMUSG00000031778 Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:16 ENSG00000103494 ENSG00000140718 ENSG00000177508 ENSG00000176842 ENSG00000159387 ENSG00000087245 ENSG00000087253 ENSG00000256812 ENSG00000103546 ENSG00000198848 ENSG00000159398 ENSG00000087258 ENSG00000159461 ENSG00000167005 ENSG00000087263 ENSG00000102891 ENSG00000087250 ENSG00000125148 ENSG00000169715 ENSG00000205364 ENSG00000205362 ENSG00000169688 ENSG00000198417 ENSG00000125144 ENSG00000205358 ENSG00000275691 ENSG00000187193 ENSG00000102900 ENSG00000070915 ENSG00000051108 Click to hide this line (Bbel) Bbel terminal node Bbel - scaffold3 148110F 148120R 148130R 148140F 148150R 148160F 148170R 148180F 148190R 148200F 148210R 148220R 148230F 148240R 148250R 148270R 148280F 148290F 148300R 148310F 148320R 148330F 148340F 148350F 148360F 148370F 148380R 148390F 148400R 148410F Click to show this node (33) 33 speciation node (click to collapse) Click to hide this line (Skow) Skow terminal node Skow - scaffold_985 Sakowv30039518m.g Sakowv30039517m.g Sakowv30039520m.g Sakowv30039519m.g Sakowv30039522m.g Sakowv30039521m.g Sakowv30039514m.g Sakowv30039524m.g Sakowv30039523m.g Sakowv30039525m.g Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (33) 33 speciation node (click to collapse) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold543 SPU_000967 SPU_019689 SPU_000966 SPU_000968 SPU_023980 SPU_000965 SPU_003494 SPU_001028 SPU_000228 SPU_001029 SPU_003502 SPU_003049 SPU_003050 SPU_006081 SPU_006082 SPU_017548 SPU_003495 SPU_003496 SPU_003497 SPU_003501 SPU_003500 SPU_019612 SPU_019611 Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to show this node (34_Deuterostomia) 34_Deuterostomia duplication node (click to collapse) Click to hide this line (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) 34_Deuterostomia (~10 My ago) Click to show this node (33) 33 speciation node (click to collapse) Click to hide this line (Skow) Skow terminal node Skow - scaffold_538 Sakowv30029074m.g Sakowv30029068m.g Sakowv30029066m.g Sakowv30029079m.g Sakowv30029081m.g Sakowv30029080m.g Sakowv30029069m.g Sakowv30029072m.g Sakowv30029078m.g Sakowv30029082m.g Sakowv30029088m.g Sakowv30029077m.g Sakowv30029087m.g Sakowv30029073m.g Sakowv30029086m.g Sakowv30029085m.g Sakowv30029067m.g Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to hide this line (Bbel) Bbel terminal node Bbel - scaffold4 187760F 187770R 187790R 187800R 187810F 187820R 187830F 187840F 187850R 187860R 187870F 187880F 187890F 187900R 187920F 187930F 187940F 187950F 187970F 187980R 187990R 188000R 188010F 188020R 188030R 188040R 188050F 188060R Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (30_Chordata) 30_Chordata speciation node (click to collapse) Click to hide this line (28) 28 speciation node (click to collapse) 28 (~10 My ago) Click to show this node (26_Sarcopterygii) 26_Sarcopterygii duplication node (click to collapse) Click to hide this line (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) 26_Sarcopterygii (~10 My ago) Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH127354.1 ENSLACG00000000861 ENSLACG00000005555 ENSLACG00000011967 ENSLACG00000013652 Click to show this node (25_Amniota) 25_Amniota speciation node (click to collapse) Click to show this node (24_Euarchontoglires) 24_Euarchontoglires duplication node (click to collapse) Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) - block_116 Fam001721.I.a.a Fam003949.c.b Fam002425.GB Fam006151 Fam001689.C.b.b Fam009368.b Fam007603.a.a.a Fam001695.J Fam004599.A.a.b.a.b Fam004599.A.a.b.a.a Fam002040.B.a.b.a Fam006903.A.a Fam005201.b Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:X ENSG00000187243 ENSG00000154545 ENSG00000155622 ENSG00000204379 ENSG00000204382 ENSG00000187754 ENSG00000241476 ENSG00000268447 ENSG00000204363 ENSG00000171405 ENSG00000171402 ENSG00000179304 ENSG00000268350 ENSG00000184194 ENSG00000184205 ENSG00000124313 ENSG00000072501 ENSG00000158423 ENSG00000072506 ENSG00000086758 ENSG00000172943 ENSG00000184083 ENSG00000196632 ENSG00000158526 ENSG00000102302 ENSG00000130119 ENSG00000102313 ENSG00000102316 ENSG00000067445 ENSG00000158571 Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:X ENSMUSG00000025269 ENSMUSG00000025271 ENSMUSG00000025272 ENSMUSG00000025268 ENSMUSG00000025266 ENSMUSG00000025265 ENSMUSG00000025264 ENSMUSG00000041245 ENSMUSG00000025262 ENSMUSG00000041229 ENSMUSG00000025261 ENSMUSG00000025260 ENSMUSG00000025257 ENSMUSG00000041133 ENSMUSG00000041115 ENSMUSG00000041096 ENSMUSG00000056679 ENSMUSG00000091863 ENSMUSG00000045180 ENSMUSG00000025333 ENSMUSG00000067215 ENSMUSG00000047238 ENSMUSG00000071665 ENSMUSG00000041658 ENSMUSG00000041649 ENSMUSG00000050148 ENSMUSG00000048573 ENSMUSG00000041633 ENSMUSG00000086316 ENSMUSG00000046550 Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:Y ENSG00000228927 ENSG00000258992 ENSG00000236424 ENSG00000114374 ENSG00000067048 ENSG00000183878 ENSG00000154620 ENSG00000129864 ENSG00000129862 ENSG00000165246 ENSG00000129873 ENSG00000182415 ENSG00000172468 ENSG00000169953 ENSG00000279335 ENSG00000198692 ENSG00000280969 ENSG00000183146 ENSG00000242875 ENSG00000234414 ENSG00000244395 ENSG00000242389 ENSG00000169807 ENSG00000169800 ENSG00000226941 ENSG00000169789 ENSG00000183753 ENSG00000188120 ENSG00000205944 ENSG00000172352 Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:Y ENSMUSG00000053211 ENSMUSG00000069053 ENSMUSG00000069049 ENSMUSG00000068457 ENSMUSG00000069045 ENSMUSG00000069044 ENSMUSG00000000103 ENSMUSG00000094881 ENSMUSG00000069036 ENSMUSG00000095573 ENSMUSG00000102053 ENSMUSG00000094658 ENSMUSG00000095852 ENSMUSG00000091987 ENSMUSG00000101667 ENSMUSG00000093918 ENSMUSG00000094511 Click to show this node (26_Sarcopterygii) 26_Sarcopterygii duplication node (click to collapse) Click to hide this line (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) 26_Sarcopterygii (~10 My ago) Click to hide this line (25_Amniota) 25_Amniota speciation node (click to collapse) 25_Amniota (~10 My ago) Click to hide this line (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) 21_Archelosauria (~10 My ago) - block_183 Fam006167 Fam003341.b.b Fam002321.H.b.a.a.b.a Fam002321.H.b.a.a.a.b Fam002986.c Fam002923.A.a.a Fam011146.b Fam001917.U.b Fam001757.T.b.b.a Fam012079.b Click to hide this line (Ggal) Ggal terminal node Ggal - Chr:1 ENSGALG00000012938 ENSGALG00000027056 ENSGALG00000012944 ENSGALG00000012946 ENSGALG00000012947 ENSGALG00000012953 ENSGALG00000012956 ENSGALG00000027125 ENSGALG00000012958 ENSGALG00000012969 ENSGALG00000012974 ENSGALG00000012975 ENSGALG00000019291 ENSGALG00000019290 ENSGALG00000012985 ENSGALG00000012987 ENSGALG00000012988 ENSGALG00000012989 ENSGALG00000012992 ENSGALG00000012993 ENSGALG00000012994 ENSGALG00000012998 ENSGALG00000013000 ENSGALG00000013007 ENSGALG00000013008 ENSGALG00000026214 ENSGALG00000013010 ENSGALG00000013022 ENSGALG00000013024 ENSGALG00000027408 Click to hide this line (Psin) Psin terminal node Psin - Chr:JH212514.1 ENSPSIG00000014899 ENSPSIG00000016114 ENSPSIG00000016188 ENSPSIG00000017127 ENSPSIG00000017167 ENSPSIG00000017324 ENSPSIG00000017394 ENSPSIG00000017627 ENSPSIG00000017634 ENSPSIG00000000069 ENSPSIG00000017646 ENSPSIG00000018017 ENSPSIG00000018055 ENSPSIG00000018131 ENSPSIG00000005972 ENSPSIG00000007206 ENSPSIG00000007211 ENSPSIG00000007494 ENSPSIG00000007507 ENSPSIG00000007533 ENSPSIG00000007611 ENSPSIG00000000070 ENSPSIG00000008271 ENSPSIG00000008288 ENSPSIG00000008331 ENSPSIG00000008464 ENSPSIG00000009149 ENSPSIG00000009160 ENSPSIG00000000071 ENSPSIG00000009931 Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) Click to hide this line (Hsap) Hsap terminal node Hsap Click to hide this line (Mmus) Mmus terminal node Mmus Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH127416.1 ENSLACG00000002246 ENSLACG00000005256 ENSLACG00000022301 ENSLACG00000007969 ENSLACG00000008197 ENSLACG00000008789 ENSLACG00000009307 ENSLACG00000010850 Click to hide this line (26_Sarcopterygii) 26_Sarcopterygii speciation node (click to collapse) 26_Sarcopterygii (~10 My ago) Click to hide this line (Lcha) Lcha terminal node Lcha - Chr:JH126587.1 ENSLACG00000009323 ENSLACG00000009589 ENSLACG00000022461 ENSLACG00000022093 ENSLACG00000010320 ENSLACG00000010503 ENSLACG00000010848 ENSLACG00000011027 ENSLACG00000011104 ENSLACG00000011261 ENSLACG00000011525 ENSLACG00000011674 ENSLACG00000011871 ENSLACG00000012003 ENSLACG00000012222 ENSLACG00000012842 ENSLACG00000013077 ENSLACG00000013243 ENSLACG00000013313 ENSLACG00000013724 ENSLACG00000013753 ENSLACG00000013817 ENSLACG00000014066 ENSLACG00000014247 ENSLACG00000014744 ENSLACG00000014997 ENSLACG00000015486 ENSLACG00000015594 ENSLACG00000015749 ENSLACG00000015839 Click to hide this line (25_Amniota) 25_Amniota speciation node (click to collapse) 25_Amniota (~10 My ago) Click to hide this line (24_Euarchontoglires) 24_Euarchontoglires speciation node (click to collapse) 24_Euarchontoglires (~10 My ago) - block_3 Fam006400.b.a Fam003712.a Fam005239.a.a.b Fam002006.D.a.a.b Fam001879.C.b Fam006066.b.b.a Fam005755.b.a Fam002882.E.a.a.a Fam005656.d.b Fam005656.d.a.a Fam003070.A.a.b.b.b.a Fam006398.a.a.b Fam006327.A.a.a.b Fam001757.T.a.b Fam002330.S.b Fam002385.C.b.b.b Fam002369.GC Fam001861.IB.a.a.a.a Fam003126.E.a.b Fam005185.b.b.a.a.a Fam003929.a Fam003205.b.b Fam007472.c.b Fam010257.b.a.a.a.b Fam010257.a.d Fam004026.a.b.a.b Fam004505.b.b.a.a Fam005216.b.b.a Fam006123.b Fam006913.b.b Click to hide this line (Hsap) Hsap terminal node Hsap - Chr:1 ENSG00000159176 ENSG00000134369 ENSG00000198700 ENSG00000198892 ENSG00000163431 ENSG00000134375 ENSG00000176393 ENSG00000163435 ENSG00000170075 ENSG00000143862 ENSG00000143851 ENSG00000133067 ENSG00000077152 ENSG00000077157 ENSG00000143858 ENSG00000183155 ENSG00000117153 ENSG00000159346 ENSG00000159348 ENSG00000163444 ENSG00000143847 ENSG00000122180 ENSG00000163485 ENSG00000133055 ENSG00000133048 ENSG00000133063 ENSG00000159388 ENSG00000122176 ENSG00000188783 ENSG00000188770 Click to hide this line (Mmus) Mmus terminal node Mmus - Chr:1 ENSMUSG00000041559 ENSMUSG00000020423 ENSMUSG00000026450 ENSMUSG00000064246 ENSMUSG00000042451 ENSMUSG00000042429 ENSMUSG00000026459 ENSMUSG00000026458 ENSMUSG00000042305 ENSMUSG00000050526 ENSMUSG00000026456 ENSMUSG00000026457 ENSMUSG00000026455 ENSMUSG00000042229 ENSMUSG00000046367 ENSMUSG00000026452 ENSMUSG00000073557 ENSMUSG00000026429 ENSMUSG00000042793 ENSMUSG00000031506 ENSMUSG00000026426 ENSMUSG00000026424 ENSMUSG00000003051 ENSMUSG00000041926 ENSMUSG00000062580 ENSMUSG00000048096 ENSMUSG00000041889 ENSMUSG00000041879 ENSMUSG00000009418 ENSMUSG00000026421 Click to hide this line (21_Archelosauria) 21_Archelosauria speciation node (click to collapse) 21_Archelosauria (~10 My ago) Click to hide this line (Ggal) Ggal terminal node Ggal Click to hide this line (Psin) Psin terminal node Psin - Chr:JH210663.1 Click to hide this line (16_Ascidiacea) 16_Ascidiacea speciation node (click to collapse) 16_Ascidiacea (~10 My ago) Click to hide this line (15_Phlebobranchia) 15_Phlebobranchia speciation node (click to collapse) 15_Phlebobranchia (~10 My ago) Click to hide this line (11_Ciona) 11_Ciona speciation node (click to collapse) 11_Ciona (~10 My ago) - block_65 Fam006276.B Fam003159.C Fam005426.A Fam001879.W.a Fam002893.C.a Fam007113.C.a Fam002150.E.a.a Fam011736 Fam005450.b Fam006778 Click to hide this line (Cisavi) Cisavi terminal node Cisavi - Chr:reftig_5 Cisavi.CG.ENS81.R5.571364-574838 (ENSCSAVG00000000477) Cisavi.CG.ENS81.R5.580771-590598 (ENSCSAVG00000000478) Cisavi.CG.ENS81.R5.593782-597608 (ENSCSAVG00000000479) Cisavi.CG.ENS81.R5.599100-602281 (ENSCSAVG00000000480) Cisavi.CG.ENS81.R5.604692-614193 (ENSCSAVG00000000483) Cisavi.CG.ENS81.R5.618075-618427 (ENSCSAVG00000000487) Cisavi.CG.ENS81.R5.622854-625956 (ENSCSAVG00000000488) Cisavi.CG.ENS81.R5.628392-634981 (ENSCSAVG00000000490) Cisavi.CG.ENS81.R5.646837-673120 (ENSCSAVG00000000491) Cisavi.CG.ENS81.R5.678480-680297 (ENSCSAVG00000000492) Cisavi.CG.ENS81.R5.686808-699011 (ENSCSAVG00000000493) Cisavi.CG.ENS81.R5.710663-713437 (ENSCSAVG00000000494) Cisavi.CG.ENS81.R5.728546-733378 (ENSCSAVG00000000495) Cisavi.CG.ENS81.R5.733848-736397 (ENSCSAVG00000000496) Cisavi.CG.ENS81.R5.736921-738034 (ENSCSAVG00000000497) Cisavi.CG.ENS81.R5.774082-776961 (ENSCSAVG00000000573) Cisavi.CG.ENS81.R5.777416-777953 (ENSCSAVG00000000579) Cisavi.CG.ENS81.R5.779134-780286 (ENSCSAVG00000000580) Cisavi.CG.ENS81.R5.781026-781997 (ENSCSAVG00000000581) Cisavi.CG.ENS81.R5.782324-783563 (ENSCSAVG00000000583) Cisavi.CG.ENS81.R5.776830-793905 (ENSCSAVG00000000576) Cisavi.CG.ENS81.R5.809870-815313 (ENSCSAVG00000000586) Cisavi.CG.ENS81.R5.825912-833613 (ENSCSAVG00000000588) Cisavi.CG.ENS81.R5.835684-836968 (ENSCSAVG00000000591) Cisavi.CG.ENS81.R5.838953-850328 (ENSCSAVG00000000594) Cisavi.CG.ENS81.R5.850204-851191 (ENSCSAVG00000000599) Cisavi.CG.ENS81.R5.853619-855825 (ENSCSAVG00000000600) Cisavi.CG.ENS81.R5.855892-859284 (ENSCSAVG00000000601) Cisavi.CG.ENS81.R5.859585-861035 (ENSCSAVG00000000602) Cisavi.CG.ENS81.R5.861241-863958 (ENSCSAVG00000000604) Click to hide this line (Cirobu) Cirobu terminal node Cirobu - Chr:KhC1 KH2012:KH.C1.983 KH2012:KH.C1.535 KH2012:KH.C1.1221 KH2012:KH.C1.936 KH2012:KH.C1.191 KH2012:KH.C1.68 KH2012:KH.C1.309 KH2012:KH.C1.199 KH2012:KH.C1.991 KH2012:KH.C1.449 KH2012:KH.C1.317 KH2012:KH.C1.1152 KH2012:KH.C1.863 KH2012:KH.C1.1284 KH2012:KH.C1.787 KH2012:KH.C1.809 KH2012:KH.C1.1081 KH2012:KH.C1.63 KH2012:KH.C1.1122 KH2012:KH.C1.1158 KH2012:KH.C1.99 KH2012:KH.C1.1053 KH2012:KH.C1.89 KH2012:KH.C1.633 KH2012:KH.C1.4 KH2012:KH.C1.898 KH2012:KH.C1.628 KH2012:KH.C1.884 KH2012:KH.C1.484 KH2012:KH.C1.574 Click to show this node (14_Phallusia) 14_Phallusia speciation node (click to collapse) Click to hide this line (Phmamm) Phmamm terminal node Phmamm - Chr:S51 Phmamm.CG.MTP2014.S51.g01900 Phmamm.CG.MTP2014.S51.g01901 Phmamm.CG.MTP2014.S51.g01902 Phmamm.CG.MTP2014.S51.g01903 Phmamm.CG.MTP2014.S51.g01904 Phmamm.CG.MTP2014.S51.g01905 Phmamm.CG.MTP2014.S51.g01906 Phmamm.CG.MTP2014.S51.g01908 Phmamm.CG.MTP2014.S51.g01909 Phmamm.CG.MTP2014.S51.g01910 Phmamm.CG.MTP2014.S51.g01911 Phmamm.CG.MTP2014.S51.g01912 Phmamm.CG.MTP2014.S51.g01913 Phmamm.CG.MTP2014.S51.g01914 Phmamm.CG.MTP2014.S51.g01915 Phmamm.CG.MTP2014.S51.g01916 Phmamm.CG.MTP2014.S51.g01917 Phmamm.CG.MTP2014.S51.g01918 Phmamm.CG.MTP2014.S51.g01919 Phmamm.CG.MTP2014.S51.g01920 Phmamm.CG.MTP2014.S51.g01921 Phmamm.CG.MTP2014.S51.g01922 Click to hide this line (8_Stolidobranchia) 8_Stolidobranchia speciation node (click to collapse) 8_Stolidobranchia (~10 My ago) Click to hide this line (2_Molgula) 2_Molgula speciation node (click to collapse) 2_Molgula (~10 My ago) Click to hide this line (Moocul) Moocul terminal node Moocul - Chr:S109860 Moocul.CG.ELv1_2.S109860.g11396 Moocul.CG.ELv1_2.S109860.g11397 Moocul.CG.ELv1_2.S109860.g11398 Moocul.CG.ELv1_2.S109860.g11399 Moocul.CG.ELv1_2.S109860.g11400 Moocul.CG.ELv1_2.S109860.g11401 Moocul.CG.ELv1_2.S109860.g11402 Moocul.CG.ELv1_2.S109860.g11403 Moocul.CG.ELv1_2.S109860.g11404 Moocul.CG.ELv1_2.S109860.g11405 Moocul.CG.ELv1_2.S109860.g11406 Moocul.CG.ELv1_2.S109860.g11407 Moocul.CG.ELv1_2.S109860.g11408 Moocul.CG.ELv1_2.S109860.g11409 Click to hide this line (Moocci) Moocci terminal node Moocci - Chr:S95744 Moocci.CG.ELv1_2.S95744.g01380 Moocci.CG.ELv1_2.S95744.g01381 Moocci.CG.ELv1_2.S95744.g01383 Click to hide this line (7) 7 speciation node (click to collapse) 7 (~10 My ago) Click to hide this line (6_Halocynthia) 6_Halocynthia speciation node (click to collapse) 6_Halocynthia (~10 My ago) - block_532 Fam001933.I Fam003717.b Fam010457.c.b.c Click to hide this line (Harore) Harore terminal node Harore - Chr:S334 Harore.CG.MTP2014.S334.g12016 Harore.CG.MTP2014.S334.g07398 Harore.CG.MTP2014.S334.g08755 Harore.CG.MTP2014.S334.g15064 Harore.CG.MTP2014.S334.g09226 Harore.CG.MTP2014.S334.g02363 Harore.CG.MTP2014.S334.g06420 Harore.CG.MTP2014.S334.g04718 Harore.CG.MTP2014.S334.g12180 Harore.CG.MTP2014.S334.g15394 Click to hide this line (Haaura) Haaura terminal node Haaura - Chr:S1160 Haaura.CG.MTP2014.S1160.g07759 Haaura.CG.MTP2014.S1160.g07760 Haaura.CG.MTP2014.S1160.g07761 Click to hide this line (Boschl) Boschl terminal node Boschl - Chr:chr5 Boschl.CG.Botznik2013.chr5.g66780 Boschl.CG.Botznik2013.chr5.g66797 Boschl.CG.Botznik2013.chr5.g66798 Boschl.CG.Botznik2013.chr5.g66801 Boschl.CG.Botznik2013.chr5.g66802 Boschl.CG.Botznik2013.chr5.g66803 Boschl.CG.Botznik2013.chr5.g66804 Boschl.CG.Botznik2013.chr5.g66805 Boschl.CG.Botznik2013.chr5.g66814 Boschl.CG.Botznik2013.chr5.g66815 Boschl.CG.Botznik2013.chr5.g66816 Boschl.CG.Botznik2013.chr5.g66831 Boschl.CG.Botznik2013.chr5.g66868 Boschl.CG.Botznik2013.chr5.g66879 Boschl.CG.Botznik2013.chr5.g66880 Boschl.CG.Botznik2013.chr5.g66906 Boschl.CG.Botznik2013.chr5.g66907 Boschl.CG.Botznik2013.chr5.g66910 Boschl.CG.Botznik2013.chr5.g66945 Boschl.CG.Botznik2013.chr5.g66947 Boschl.CG.Botznik2013.chr5.g66960 Boschl.CG.Botznik2013.chr5.g66961 Boschl.CG.Botznik2013.chr5.g66962 Boschl.CG.Botznik2013.chr5.g67005 Boschl.CG.Botznik2013.chr5.g67006 Boschl.CG.Botznik2013.chr5.g67032 Boschl.CG.Botznik2013.chr5.g67033 Boschl.CG.Botznik2013.chr5.g66246 Boschl.CG.Botznik2013.chr5.g67046 Boschl.CG.Botznik2013.chr5.g67047 Click to show this node (34_Deuterostomia) 34_Deuterostomia speciation node (click to collapse) Click to show this node (33) 33 speciation node (click to collapse) Click to hide this line (Spur) Spur terminal node Spur - Chr:Scaffold1994 SPU_008724 SPU_003498 SPU_003499 SPU_009420 SPU_003942 SPU_003941 SPU_022272 Fam008694 KH2012:KH.C10.417 Cisavi.CG.ENS81.R37.1749077-1756042 (ENSCSAVG00000005852) Phmamm.CG.MTP2014.S1003.g13204 KH2012:KH.C10.121 Fam001971.I KH2012:KH.C10.559 Cisavi.CG.ENS81.R37.1824730-1827673 (ENSCSAVG00000005944) KH2012:KH.C10.450 Cisavi.CG.ENS81.R37.2013778-2014766 (ENSCSAVG00000006641) KH2012:KH.C10.73 KH2012:KH.C10.60 Cisavi.CG.ENS81.R37.2037220-2046526 (ENSCSAVG00000006643) KH2012:KH.C10.316 Fam001826.K Fam001826.K KH2012:KH.C10.168 Phmamm.CG.MTP2014.S1003.g13202 KH2012:KH.C10.198 Fam008840 KH2012:KH.C10.15 Fam002362.EB.b.b.a KH2012:KH.C10.335 187780F 187960R KH2012:KH.C10.447 Cisavi.CG.ENS81.R37.2002048-2009462 (ENSCSAVG00000006636) Fam008319 KH2012:KH.C10.287 Fam002032.G KH2012:KH.C10.538 Cisavi.CG.ENS81.R37.1935774-1936778 (ENSCSAVG00000006196) KH2012:KH.C10.383 KH2012:KH.C10.303 KH2012:KH.C10.229 KH2012:KH.C10.564 Cisavi.CG.ENS81.R37.2048940-2056984 (ENSCSAVG00000006647) KH2012:KH.C10.381 Fam007046.c Fam007046.c KH2012:KH.C10.242 Phmamm.CG.MTP2014.S1003.g13203 Fam007051 KH2012:KH.C10.577 Cisavi.CG.ENS81.R37.1861491-1862255 (ENSCSAVG00000005998) KH2012:KH.C10.399 KH2012:KH.C10.276 Fam001988.B Fam001988.B Fam001988.B Fam001988.B Fam001988.B Fam001988.B KH2012:KH.C10.523 Cisavi.CG.ENS81.R37.1919959-1935404 (ENSCSAVG00000006041) Fam001988.B.a Phmamm.CG.MTP2014.S2363.g16584 Phfumi.CG.MTP2014.S1049.g03170 Phmamm.CG.MTP2014.S1003.g13200 Fam001988.B Fam001988.B Moocci.CG.ELv1_2.S491613.g18168 Moocul.CG.ELv1_2.S55931.g03364 Fam001988.B Boschl.CG.Botznik2013.chr5.g71775 Fam001988.B Harore.CG.MTP2014.S13.g06589 Haaura.CG.MTP2014.S257.g03749 Fam001988.B ENSLACG00000014995 Fam001988.B Fam001988.B ENSPSIG00000011625 ENSGALP00000004804 Fam001988.B ENSMUSG00000031755 ENSG00000125124 148260F Sakowv30039515m.g SPU_027384 Fam001988.C Sakowv30029063m.g 187910F Fam001988.D Fam001988.D.a ENSLACG00000012681 Fam001988.D.a.a ENSG00000126012 ENSMUSG00000025332 Fam001988.D.a.b ENSG00000012817 ENSMUSG00000056673 Fam001988.D.b.a Fam001988.D.b.a Fam001988.D.b.a ENSGALG00000012986 ENSPSIG00000006292 Fam001988.D.b.a ENSP00000372265 ENSMUSP00000098558 ENSLACG00000012566 Fam001988.D.b.b ENSLACG00000012136 Fam001988.D.b.b Fam001988.D.b.b ENSG00000117139 ENSMUSG00000042207 Fam001988.D.b.b ENSGALP00000000581 ENSPSIG00000013008 Fam001988.D Fam001988.D Fam001988.D Cisavi.CG.ENS81.R5.742291-760780 (ENSCSAVG00000000499) KH2012:KH.C1.677 Phmamm.CG.MTP2014.S51.g01907 Fam001988.D Fam001988.D Moocul.CG.ELv1_2.S109860.g11395 Moocci.CG.ELv1_2.S95744.g01382 Fam001988.D Fam001988.D Harore.CG.MTP2014.S334.g10029 Haaura.CG.MTP2014.S1160.g07762 Boschl.CG.Botznik2013.chr5.g66894 SPU_000964 KH2012:KH.C10.364 KH2012:KH.C10.328 Fam007477 KH2012:KH.C10.211 Cisavi.CG.ENS81.R37.1764865-1796614 (ENSCSAVG00000005866) Fam003422 Fam003422 KH2012:KH.C10.510 Cisavi.CG.ENS81.R37.1905798-1912870 (ENSCSAVG00000006029) Phmamm.CG.MTP2014.S1003.g13201 KH2012:KH.C10.32 KH2012:KH.C10.354 KH2012:KH.C10.8