GenomicusMetazoa v51.01

Here you can choose the oldest ancestor of your phylogenetic range of interest and the view you want to display by clicking on one of the following links.

PhyloView will show the conservation of the neighbourhood of the reference gene in the other species, according to the gene phylogenetic tree.
AlignView will align the gene order of the selected species, according to the species phylogenetic tree.

Root species for EMGT00050000004196.A.a (Mollusca)	AlignView depth	PhyloView depth
Metazoa	198 species
Eumetazoa	196 species	431 homologs (oldest homol. - dupl. node) 416 homologs (dupl. node) 252 homologs
Bilateria	187 species	251 homologs
Protostomia	182 species	250 homologs
Spiralia	14 species	28 homologs
Lophotrochozoa	12 species	20 homologs (dupl. node) 9 homologs
Mollusca	6 species	3 homologs

Advanced Options

-evalue <Real>
 Expectation value (E) threshold for saving hits
 Default = '10'

-word_size <Integer, >=2>
 Word size for wordfinder algorithm
 Default = '3'

-gapopen <Integer>
 Cost to open a gap
 Default = '11'

-gapextend <Integer>
 Cost to extend a gap
 Default = '1'

-matrix <String>
Scoring matrix name (normally BLOSUM62)

-threshold <Real, >=0>
Minimum word score such that the word is added to the BLAST lookup table
 Default = '11'

-window_size <Integer, >=0>
Multiple hits window size, use 0 to specify 1-hit algorithm
 Default = '40'