Root species for Slc2a9 (ENSNGAG00000018562) (Upper Galilee mountains blind mole rat) | AlignView depth | PhyloView depth | |
---|---|---|---|
Fungi/Metazoa group | ![]() |
358 species ![]() |
|
Bilateria | ![]() |
356 species ![]() |
|
Chordata | ![]() |
352 species ![]() |
|
Vertebrata | ![]() |
348 species ![]() |
360 homologs (oldest homol.) ![]() |
Gnathostomata | ![]() |
344 species ![]() |
357 homologs ![]() |
Euteleostomi | ![]() |
342 species ![]() |
355 homologs ![]() |
Sarcopterygii | ![]() |
241 species ![]() |
248 homologs ![]() |
Tetrapoda | ![]() |
239 species ![]() |
246 homologs ![]() |
Amniota | ![]() |
237 species ![]() |
244 homologs ![]() |
Mammalia | ![]() |
169 species ![]() |
171 homologs ![]() |
Theria | ![]() |
167 species ![]() |
169 homologs ![]() |
Eutheria | ![]() |
158 species ![]() |
158 homologs ![]() |
Boreoeutheria | ![]() |
149 species ![]() |
150 homologs ![]() |
Euarchontoglires | ![]() |
104 species ![]() |
104 homologs ![]() |
Glires | ![]() |
57 species ![]() |
59 homologs ![]() |
Rodentia | ![]() |
53 species ![]() |
55 homologs ![]() |
Sciurognathi | ![]() |
39 species ![]() |
41 homologs ![]() |
Myomorpha | ![]() |
28 species ![]() |
30 homologs ![]() |
Muroidea | ![]() |
26 species ![]() |
28 homologs ![]() |
Upper Galilee mountains blind mole rat | ![]() |
1 species ![]() |
1 homolog ![]() |
-evalue <Real>
Expectation value (E) threshold for saving hits
Default = '10'
-word_size <Integer, >=2>
Word size for wordfinder algorithm
Default = '3'
-gapopen <Integer>
Cost to open a gap
Default = '11'
-gapextend <Integer>
Cost to extend a gap
Default = '1'
-matrix <String>
Scoring matrix name (normally BLOSUM62)
-threshold <Real, >=0>
Minimum word score such that the word is added to the BLAST lookup table
Default = '11'
-window_size <Integer, >=0>
Multiple hits window size, use 0 to specify 1-hit algorithm
Default = '40'