DYOGEN group
web-code version: 2012-04-17
database version: 12.01
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GenomicusFungi 12.01 contains 0 genes from 0 extant species.
This data was downloaded from EnsemblGenomes release 12.
A "contig" means a segment of the genome sequence assembly (chromosomes, scaffolds, contig) with at least two genes.
| Basidiomycota | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
|---|---|---|---|---|---|---|---|
| Puccinia graministritici | (extant sp.) | 20534 | 314 | 65.2 | 236 | 50 | 99.8% |
| Ustilago maydis | (extant sp.) | 6522 | 247 | 26.3 | 44 | 17 | 99.7% |
| Puccinia triticina | (extant sp.) | 11638 | 566 | 17.7 | 56 | 1616 | 86.1% |
| Aspergillus | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Aspergillus fumigatus | (extant sp.) | 9630 | 8 | 1203.8 | 1351 | 0 | 100.0% |
| Aspergillus oryzae | (extant sp.) | 12074 | 10 | 1207.3 | 1516 | 1 | 100.0% |
| Aspergillus fumigatusa1163 | (extant sp.) | 9916 | 13 | 762.5 | 1348 | 3 | 100.0% |
| Aspergillus clavatus | (extant sp.) | 9121 | 17 | 536.4 | 827 | 3 | 100.0% |
| Aspergillus terreus | (extant sp.) | 10402 | 17 | 611.8 | 671 | 2 | 100.0% |
| Aspergillus flavus | (extant sp.) | 13487 | 17 | 793.0 | 914 | 6 | 100.0% |
| Aspergillus niger | (extant sp.) | 14081 | 8 | 1760.1 | 1827 | 0 | 100.0% |
| Saccharomycetaceae | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Ashbya gossypii | (extant sp.) | 4776 | 8 | 597.0 | 813 | 0 | 100.0% |
| Saccharomyces cerevisiae | (extant sp.) | 6692 | 17 | 393.6 | 513 | 0 | 100.0% |
| Other Saccharomyceta | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Mycosphaerella graminicola | (extant sp.) | 10931 | 21 | 520.5 | 778 | 0 | 100.0% |
| Tuber melanosporum | (extant sp.) | 7496 | 286 | 26.1 | 53 | 38 | 99.5% |
| Fusarium oxysporum | (extant sp.) | 17696 | 58 | 304.9 | 1279 | 9 | 99.9% |
| Gibberella moniliformis | (extant sp.) | 14166 | 20 | 708.2 | 1418 | 1 | 100.0% |
| Gibberella zeae | (extant sp.) | 13317 | 7 | 1902.4 | 3384 | 0 | 100.0% |
| Phaeosphaeria nodorum | (extant sp.) | 12391 | 54 | 229.4 | 450 | 3 | 100.0% |
| Aspergillus nidulans | (extant sp.) | 10534 | 8 | 1316.8 | 1320 | 0 | 100.0% |
| Neosartorya fischeri | (extant sp.) | 10402 | 17 | 611.0 | 1014 | 15 | 99.9% |
| Nectria haematococca | (extant sp.) | 15705 | 122 | 128.6 | 1217 | 20 | 99.9% |
| Neurospora crassa | (extant sp.) | 9820 | 114 | 86.1 | 186 | 7 | 99.9% |
| Other Ascomycota | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Schizosaccharomyces pombe | (extant sp.) | 5142 | 6 | 857.0 | 1869 | 0 | 100.0% |