DYOGEN group
web-code version: 2014-07-06
database version: 23.01
Contact us.
|
|
|
|
GenomicusFungi 23.01 contains 0 genes from 0 extant species.
This data was downloaded from EnsemblGenomes release .
A "contig" means a segment of the genome sequence assembly (chromosomes, scaffolds, contig) with at least two genes.
| Basidiomycota | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
|---|---|---|---|---|---|---|---|
| Sporisorium reilianum | (extant sp.) | 6673 | 26 | 255.9 | 303 | 19 | 99.7% |
| Ustilago maydis | (extant sp.) | 6522 | 247 | 26.3 | 44 | 17 | 99.7% |
| Cryptococcus neoformans | (extant sp.) | 6273 | 14 | 448.1 | 513 | 0 | 100.0% |
| Puccinia graminis sp tritici CRL 75-36-700-3 | (extant sp.) | 15800 | 263 | 59.8 | 180 | 66 | 99.6% |
| Microbotryum violaceum | (extant sp.) | 7364 | 233 | 30.9 | 67 | 156 | 97.9% |
| Puccinia graminis f. sp. tritici 04KEN156_4 | (extant sp.) | 15800 | 263 | 59.8 | 180 | 66 | 99.6% |
| Melampsora larici populina | (extant sp.) | 16372 | 285 | 57.1 | 181 | 85 | 99.5% |
| Puccinia triticina | (extant sp.) | 11638 | 566 | 17.7 | 56 | 1616 | 86.1% |
| Aspergillus | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Aspergillus fumigatus Af293 | (extant sp.) | 9630 | 8 | 1203.8 | 1351 | 0 | 100.0% |
| Aspergillus oryzae | (extant sp.) | 12074 | 10 | 1207.3 | 1516 | 1 | 100.0% |
| Aspergillus fumigatus A1163 | (extant sp.) | 9630 | 8 | 1203.8 | 1351 | 0 | 100.0% |
| Aspergillus clavatus | (extant sp.) | 9121 | 17 | 536.4 | 827 | 3 | 100.0% |
| Aspergillus terreus | (extant sp.) | 10402 | 17 | 611.8 | 671 | 2 | 100.0% |
| Aspergillus flavus | (extant sp.) | 13487 | 17 | 793.0 | 914 | 6 | 100.0% |
| Aspergillus niger | (extant sp.) | 14068 | 8 | 1758.5 | 1827 | 0 | 100.0% |
| Saccharomycetaceae | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Saccharomyces cerevisiae | (extant sp.) | 6692 | 17 | 393.6 | 513 | 0 | 100.0% |
| Komagataella pastoris | (extant sp.) | 5040 | 4 | 1260.0 | 1333 | 0 | 100.0% |
| Ashbya gossypii | (extant sp.) | 4776 | 8 | 597.0 | 813 | 0 | 100.0% |
| Other Saccharomyceta | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Botrytis cinerea | (extant sp.) | 10345 | 72 | 143.6 | 250 | 3 | 100.0% |
| Magnaporthe poae | (extant sp.) | 11209 | 119 | 93.8 | 962 | 49 | 99.6% |
| Zymoseptoria tritici | (extant sp.) | 10931 | 21 | 520.5 | 778 | 0 | 100.0% |
| Neosartorya fischeri | (extant sp.) | 10402 | 17 | 611.0 | 1014 | 15 | 99.9% |
| Dothistroma septosporum | (extant sp.) | 12400 | 17 | 729.2 | 1044 | 3 | 100.0% |
| Fusarium graminearum | (extant sp.) | 13317 | 7 | 1902.4 | 3384 | 0 | 100.0% |
| Verticillium dahliae | (extant sp.) | 10535 | 46 | 229.0 | 339 | 3 | 100.0% |
| Colletotrichum higginsianum | (extant sp.) | 16141 | 4166 | 2.9 | 3 | 4102 | 74.6% |
| Aspergillus nidulans | (extant sp.) | 10534 | 8 | 1316.8 | 1320 | 0 | 100.0% |
| Sclerotinia sclerotiorum | (extant sp.) | 10175 | 21 | 484.5 | 778 | 0 | 100.0% |
| Colletotrichum orbiculare | (extant sp.) | 13346 | 241 | 55.1 | 160 | 57 | 99.6% |
| Yarrowia lipolytica | (extant sp.) | 6448 | 6 | 1074.7 | 1100 | 0 | 100.0% |
| Gaeumannomyces graminis | (extant sp.) | 14189 | 185 | 75.9 | 2296 | 141 | 99.0% |
| Colletotrichum graminicola | (extant sp.) | 12020 | 164 | 72.9 | 174 | 62 | 99.5% |
| Leptosphaeria maculans | (extant sp.) | 12469 | 32 | 389.6 | 565 | 2 | 100.0% |
| Colletotrichum gloeosporioides | (extant sp.) | 15381 | 784 | 19.4 | 35 | 207 | 98.7% |
| Magnaporthe oryzae | (extant sp.) | 12593 | 8 | 1574.1 | 2036 | 0 | 100.0% |
| Pyrenophora tritici-repentis | (extant sp.) | 11799 | 1077 | 9.8 | 15 | 1223 | 89.6% |
| Neurospora crassa | (extant sp.) | 9820 | 114 | 86.1 | 186 | 7 | 99.9% |
| Fusarium oxysporum | (extant sp.) | 17696 | 58 | 304.9 | 1279 | 9 | 99.9% |
| Trichoderma reesei | (extant sp.) | 9113 | 58 | 157.0 | 350 | 6 | 99.9% |
| Phaeosphaeria nodorum | (extant sp.) | 12391 | 54 | 229.4 | 450 | 3 | 100.0% |
| Blumeria graminis | (extant sp.) | 6470 | 78 | 81.9 | 187 | 78 | 98.8% |
| Nectria haematococca | (extant sp.) | 15705 | 122 | 128.6 | 1217 | 20 | 99.9% |
| Trichoderma virens | (extant sp.) | 12400 | 86 | 144.1 | 556 | 6 | 100.0% |
| Pyrenophora teres | (extant sp.) | 11799 | 1077 | 9.8 | 15 | 1223 | 89.6% |
| Fusarium fujikuroi | (extant sp.) | 14813 | 12 | 1234.4 | 1378 | 0 | 100.0% |
| Fusarium pseudograminearum CS3096 | (extant sp.) | 12448 | 350 | 35.4 | 63 | 58 | 99.5% |
| Fusarium verticillioides 7600 | (extant sp.) | 14166 | 20 | 708.2 | 1418 | 1 | 100.0% |
| Tuber melanosporum | (extant sp.) | 7496 | 286 | 26.1 | 53 | 38 | 99.5% |
| Other Ascomycota | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Schizosaccharomyces cryophilus | (extant sp.) | 5155 | 14 | 367.9 | 646 | 4 | 99.9% |
| Schizosaccharomyces octosporus | (extant sp.) | 4986 | 3 | 1662.0 | 1681 | 0 | 100.0% |
| Schizosaccharomyces pombe | (extant sp.) | 5143 | 6 | 857.2 | 1869 | 0 | 100.0% |
| Schizosaccharomyces japonicus | (extant sp.) | 4878 | 8 | 609.2 | 1661 | 4 | 99.9% |