DYOGEN group
web-code version: 2012-04-17
database version: 16.01
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GenomicusMetazoa 16.01 contains 0 genes from 0 extant species.
This data was downloaded from EnsemblGenomes release 16.
A "contig" means a segment of the genome sequence assembly (chromosomes, scaffolds, contig) with at least two genes.
| Nematoda | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
|---|---|---|---|---|---|---|---|
| Caenorhabditis elegans | (extant sp.) | 20517 | 7 | 2931.0 | 3326 | 0 | 100.0% |
| Caenorhabditis japonica | (extant sp.) | 29964 | 2645 | 8.9 | 19 | 6493 | 78.3% |
| Caenorhabditis remanei | (extant sp.) | 31444 | 1405 | 21.7 | 136 | 916 | 97.1% |
| Trichinella spiralis | (extant sp.) | 16380 | 465 | 29.4 | 1541 | 2688 | 83.6% |
| Caenorhabditis brenneri | (extant sp.) | 30667 | 1172 | 25.7 | 97 | 581 | 98.1% |
| Pristionchus pacificus | (extant sp.) | 29644 | 625 | 45.3 | 153 | 1338 | 95.5% |
| Caenorhabditis briggsae AF16 | (extant sp.) | 21936 | 12 | 1828.0 | 3346 | 0 | 100.0% |
| Diptera | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Drosophila pseudoobscura pseudoobscura | (extant sp.) | 16011 | 279 | 55.6 | 1482 | 496 | 96.9% |
| Drosophila ananassae | (extant sp.) | 15069 | 101 | 147.2 | 2762 | 203 | 98.7% |
| Drosophila willistoni | (extant sp.) | 15512 | 185 | 79.8 | 705 | 756 | 95.1% |
| Drosophila yakuba | (extant sp.) | 16077 | 209 | 75.0 | 2797 | 396 | 97.5% |
| Drosophila grimshawi | (extant sp.) | 14982 | 274 | 52.0 | 1449 | 745 | 95.0% |
| Drosophila sechellia | (extant sp.) | 16467 | 295 | 53.6 | 760 | 660 | 96.0% |
| Drosophila erecta | (extant sp.) | 15044 | 70 | 212.8 | 2856 | 149 | 99.0% |
| Drosophila virilis | (extant sp.) | 14491 | 72 | 199.3 | 1883 | 142 | 99.0% |
| Culex quinquefasciatus | (extant sp.) | 18955 | 1455 | 12.7 | 26 | 535 | 97.2% |
| Drosophila persimilis | (extant sp.) | 16874 | 247 | 65.3 | 483 | 755 | 95.5% |
| Drosophila melanogaster | (extant sp.) | 13937 | 14 | 995.5 | 2735 | 0 | 100.0% |
| Anopheles darlingi | (extant sp.) | 11430 | 2025 | 4.7 | 6 | 1858 | 83.7% |
| Drosophila mojavensis | (extant sp.) | 14594 | 56 | 255.5 | 2603 | 285 | 98.0% |
| Aedes aegypti | (extant sp.) | 15998 | 1205 | 12.9 | 21 | 431 | 97.3% |
| Anopheles gambiae | (extant sp.) | 12670 | 6 | 2111.7 | 2868 | 0 | 100.0% |
| Drosophila simulans | (extant sp.) | 15413 | 245 | 59.7 | 2872 | 796 | 94.8% |
| Lepidoptera | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Danaus plexippus | (extant sp.) | 16254 | 2381 | 5.8 | 8 | 2563 | 84.2% |
| Heliconius melpomene | (extant sp.) | 12669 | 1447 | 8.3 | 13 | 675 | 94.7% |
| Bombyx mori | (extant sp.) | 14616 | 309 | 46.6 | 151 | 209 | 98.6% |
| Hymenoptera | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Apis mellifera | (extant sp.) | 10694 | 1040 | 9.4 | 16 | 866 | 91.9% |
| Atta cephalotes | (extant sp.) | 18062 | 189 | 92.9 | 324 | 508 | 97.2% |
| Other Metazoa | Age | Genes | Contigs | Average size (nb genes) | N50 size (nb genes) | Genes not in contigs | Coverage (%) |
| Pediculus humanus corporis | (extant sp.) | 10773 | 361 | 29.4 | 49 | 145 | 98.7% |
| Schistosoma mansoni | (extant sp.) | 11772 | 761 | 13.0 | 25 | 1843 | 84.3% |
| Tribolium castaneum | (extant sp.) | 14903 | 10 | 1490.3 | 1805 | 0 | 100.0% |
| Ixodes scapularis | (extant sp.) | 20486 | 3118 | 5.0 | 7 | 4924 | 76.0% |
| Nematostella vectensis | (extant sp.) | 24979 | 1471 | 15.2 | 57 | 2683 | 89.3% |
| Strongylocentrotus purpuratus | (extant sp.) | 28525 | 4154 | 5.9 | 9 | 4074 | 85.7% |
| Amphimedon queenslandica | (extant sp.) | 29883 | 2695 | 9.3 | 29 | 4876 | 83.7% |
| Acyrthosiphon pisum | (extant sp.) | 33832 | 5837 | 4.8 | 6 | 5752 | 83.0% |
| Nasonia vitripennis | (extant sp.) | 17085 | 1035 | 15.6 | 106 | 932 | 94.5% |
| Daphnia pulex | (extant sp.) | 30894 | 1202 | 24.2 | 159 | 1798 | 94.2% |
| Trichoplax adhaerens | (extant sp.) | 11520 | 176 | 63.2 | 745 | 392 | 96.6% |